FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECO8A (Hydroxyacylglutathione hydrolase OS=Escherichia coli O8 (strain IAI1) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.330e-28
Identity = 77/214 (35.98%), Postives = 114/214 (53.27%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-NKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECO55 (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain 55989 / EAEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.330e-28
Identity = 77/214 (35.98%), Postives = 114/214 (53.27%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-NKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECO24 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.330e-28
Identity = 77/214 (35.98%), Postives = 114/214 (53.27%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-NKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_VIBSL (Hydroxyacylglutathione hydrolase OS=Vibrio splendidus (strain LGP32) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 73/196 (37.24%), Postives = 100/196 (51.02%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQ 615
            + I  IP   DNY +LI + + +  AVVDP +   ++E                   DH GG  ++    PG+ V G   + +   TH V++GD+  +   V  L L    HT GHI Y        D  +F GD LF AGCG+  EG+ +QM+ +L   + +LPQ T+VYC HEYT  N+ FAL VEP N  LQQ
Sbjct:    2 LHIKSIPAFNDNYIWLI-QNSDRRCAVVDPGDAAPVLEYLAHHELTLDAILITHHHHDHIGGVPELVRQFPGVDVVGPKNEPIPTLTHPVDDGDQLELFGEV-FLVLGLSGHTAGHIGYV------GDAKLFCGDVLFSAGCGRIMEGTPQQMFDALN-KITALPQETEVYCAHEYTAANIAFALAVEPDNQHLQQ 188          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHIDS (Hydroxyacylglutathione hydrolase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 73/195 (37.44%), Postives = 106/195 (54.36%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKL 609
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-KKLSALPDDTLVCCAHEYTLSNMEFALSILPHDLSI 185          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_RHOP2 (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas palustris (strain HaA2) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 77/208 (37.02%), Postives = 106/208 (50.96%), Query Frame = 1
Query:   43 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +PCL DN+ YLI + ++   A +D  E   +I A ++               DH GG  ++K      +V      N K      +VE GD   +G  +    L TP HT  HISY       +D A+F  DTLF  GCG+ FEG+   M++SL + L +LP   ++YCGHEYT  N+ FALT+EP N  LQ +    + QR AG PT
Sbjct:    8 VPCLTDNFGYLIHDPSSGATASIDAPEAAPLIAALEKEGWKLTDILVTHHHGDHVGGIAELKAKYH-CRVVAPHDANAKIADADLRVEEGDVVKVGG-LEARVLETPGHTLDHISYVFA----DDRALFAADTLFSIGCGRVFEGTYPMMWESL-LKLRALPDDYKLYCGHEYTASNVKFALTIEPENAALQARAKQVEQQRGAGRPT 208          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_LEGPL (Hydroxyacylglutathione hydrolase OS=Legionella pneumophila (strain Lens) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 70/192 (36.46%), Postives = 102/192 (53.12%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGA-HVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSN 600
            M I  I    DNY +  I++       VDP E   II  A+               +DH GG + + +  P  KVYG   + +   TH ++ G    +G+ H ++  L  P HT  HISYY    E +   +F GDTLF AGCG+ F+G+ E++++SL +    LP+ T+++C HEYT++NL FA TVEP N
Sbjct:    1 MTILPISAFSDNYIWTFIDKIAGVLDCVDPGESAPIIRFAQSNQLTLRTILLTHHHYDHIGGVDSLIKQWPSCKVYGPIDERISNLTHPIKQGQSVQVGSLHFHI--LFNPGHTSTHISYY----EPQQGWLFCGDTLFSAGCGRVFDGTIEELHESL-LLFKKLPRNTKIFCAHEYTLQNLKFAHTVEPCN 185          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_LEGPC (Hydroxyacylglutathione hydrolase OS=Legionella pneumophila (strain Corby) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 71/192 (36.98%), Postives = 102/192 (53.12%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGA-HVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSN 600
            M I  I    DNY +  I++       VDP E   II  A+               +DH GG + + +  P  KVYG   + +   TH ++ G    +G+ H ++  L  P HT  HISYY    E +   +F GDTLF AGCG+ F+G+ E++++SL +    LP+ T+V+C HEYT++NL FA TVEP N
Sbjct:    1 MTILPISAFSDNYIWAFIDKIAGVLDCVDPGEAAPIIRFAQSNQLTLRTILLTHHHYDHIGGVDSLIKQWPSCKVYGPIDERINNVTHPIKQGQSVQVGSLHFHI--LFNPGHTSTHISYY----EPQKGWLFCGDTLFSAGCGRVFDGTIEELHESL-LLFKKLPRNTKVFCAHEYTLQNLKFAHTVEPCN 185          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHIFL (Hydroxyacylglutathione hydrolase OS=Shigella flexneri GN=gloB PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.975e-28
Identity = 77/214 (35.98%), Postives = 114/214 (53.27%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIT--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTALQMYQSL-KKLSALPDDTLVCCAHEYTLSNMKFALSIFPHDLSINDYYRKVKELRAKNQITLP 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHIF8 (Hydroxyacylglutathione hydrolase OS=Shigella flexneri serotype 5b (strain 8401) GN=gloB PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.975e-28
Identity = 77/214 (35.98%), Postives = 114/214 (53.27%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIT--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTALQMYQSL-KKLSALPDDTLVCCAHEYTLSNMKFALSIFPHDLSINDYYRKVKELRAKNQITLP 204          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO2_ECO8A2.330e-2835.98Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO552.330e-2835.98Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO242.330e-2835.98Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_VIBSL3.044e-2837.24Hydroxyacylglutathione hydrolase OS=Vibrio splendi... [more]
GLO2_SHIDS3.044e-2837.44Hydroxyacylglutathione hydrolase OS=Shigella dysen... [more]
GLO2_RHOP23.044e-2837.02Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]
GLO2_LEGPL3.044e-2836.46Hydroxyacylglutathione hydrolase OS=Legionella pne... [more]
GLO2_LEGPC3.044e-2836.98Hydroxyacylglutathione hydrolase OS=Legionella pne... [more]
GLO2_SHIFL3.975e-2835.98Hydroxyacylglutathione hydrolase OS=Shigella flexn... [more]
GLO2_SHIF83.975e-2835.98Hydroxyacylglutathione hydrolase OS=Shigella flexn... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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