FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHIBS (Hydroxyacylglutathione hydrolase OS=Shigella boydii serotype 4 (strain Sb227) GN=gloB PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.975e-28
Identity = 77/214 (35.98%), Postives = 114/214 (53.27%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIT--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTALQMYQSL-KKLSALPDDTLVCCAHEYTLSNMKFALSIFPHDLSINDYYRKVKELRAKNQITLP 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_OCHA4 (Hydroxyacylglutathione hydrolase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=gloB PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.975e-28
Identity = 78/210 (37.14%), Postives = 108/210 (51.43%), Query Frame = 1
Query:   25 KMKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQA 648
            +++I    C  DNY  LI +  +   A +D  +   I  A K+               DH  GNE +K    G+ + G   +  K  G    V++GD+F+ G    V  + TP HT G +SYY+   +    AVFTGDTLF  GCG+ FEG+   M+QSL   L +LP  T VYCGHEYT  N  FALT++P+N  L+++ A     R A
Sbjct:    7 RLEIEQFICRSDNYGVLIHDPQSALTASIDAPDAAAIEAALKRRGWTLDFIFTTHHHLDHVEGNEALKAKY-GVSIIGPKAEETKIPGIDRTVKDGDEFTFGLF-RVKVIATPGHTAGEVSYYLPDAK----AVFTGDTLFALGCGRLFEGTPLTMFQSL-QKLVALPGDTAVYCGHEYTESNARFALTIDPANSALKERAAEIARLRAA 209          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_LEGPH (Hydroxyacylglutathione hydrolase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=gloB PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.975e-28
Identity = 71/192 (36.98%), Postives = 101/192 (52.60%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGA-HVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSN 600
            M I  I    DNY +  I++       VDP E   II  A+               +DH GG + + +  P  KVYG   + +   TH ++ G    +G+ H ++  L  P HT  HISYY    E +   +F GDTLF AGCG+ F+G+ E++++SL +    LP+ T+V+C HEYT +NL FA TVEP N
Sbjct:    1 MTILPISAFSDNYIWTFIDKIAGVLDCVDPGEAAPIIRFAQSNQLTLRTILLTHHHYDHIGGVDSLIKQWPSCKVYGPIDERINNVTHPIKQGQSVQVGSLHFHI--LFNPGHTSTHISYY----EPQQGWLFCGDTLFSAGCGRVFDGTIEELHESL-LLFKKLPRNTKVFCAHEYTFQNLKFAHTVEPCN 185          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_HERAR (Hydroxyacylglutathione hydrolase OS=Herminiimonas arsenicoxydans GN=gloB PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.975e-28
Identity = 76/214 (35.51%), Postives = 110/214 (51.40%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI---GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            + +  +P   DNY ++I +     AAVVDP +   I+ A ++               DH GG  K+ +    + V+    D +   +H +++GD   I     H++VL++  P HT GHI+Y       E   +F GDTLF  GCG+ FEG+  QM  SL   L +LP  T+VYC HEYT+ NL FAL  EP N  L  +    Q +R+A +PT
Sbjct:    2 LSVLTVPAFNDNYLWIIHDGV--HAAVVDPGDATPILAALEEHQLSLVAILLTHHHADHVGGVAKLLQHF-NVPVFAPRKDPIANVSHPLDDGDTVHIPELDLHLSVLAV--PGHTLGHIAYVAA----EQGWLFCGDTLFAGGCGRLFEGTPTQMLTSL-EKLAALPDDTKVYCAHEYTISNLRFALAAEPDNAALAIRFKAEQAKREADIPT 205          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECOSE (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain SE11) GN=gloB PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.975e-28
Identity = 76/214 (35.51%), Postives = 114/214 (53.27%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQS+   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSI-NKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECOLC (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=gloB PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.975e-28
Identity = 77/214 (35.98%), Postives = 113/214 (52.80%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L  LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-KKLSVLPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_LEGPA (Hydroxyacylglutathione hydrolase OS=Legionella pneumophila (strain Paris) GN=gloB PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.192e-28
Identity = 71/192 (36.98%), Postives = 102/192 (53.12%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGA-HVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSN 600
            M I  I    DNY +  I++       VDP E   II  A+               +DH GG + + +  P  KVYG   + +   TH ++ G    +G+ H ++  L  P HT  HISYY    E +   +F GDTLF AGCG+ F+G+ E++++SL +    LP+ T+V+C HEYT++NL FA TVEP N
Sbjct:    1 MTILPISAFSDNYIWTFIDKIAGVLDCVDPGEAGPIIRFAQSNQLTLRTILLTHHHYDHIGGVDLLIKQWPSCKVYGPIDERINNVTHPIKQGQSVQVGSLHFHI--LFNPGHTSTHISYY----EPQQGWLFCGDTLFSAGCGRVFDGTIEELHESL-LLFKKLPRNTKVFCAHEYTLQNLKFAHTVEPCN 185          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECOSM (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.192e-28
Identity = 76/214 (35.51%), Postives = 114/214 (53.27%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ +  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVKKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECOL5 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.192e-28
Identity = 76/214 (35.51%), Postives = 113/214 (52.80%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+  QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAISANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTPSQMYQSL-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECO81 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O81 (strain ED1a) GN=gloB PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.192e-28
Identity = 76/214 (35.51%), Postives = 113/214 (52.80%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+  QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAISANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTPSQMYQSL-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO2_SHIBS3.975e-2835.98Hydroxyacylglutathione hydrolase OS=Shigella boydi... [more]
GLO2_OCHA43.975e-2837.14Hydroxyacylglutathione hydrolase OS=Ochrobactrum a... [more]
GLO2_LEGPH3.975e-2836.98Hydroxyacylglutathione hydrolase OS=Legionella pne... [more]
GLO2_HERAR3.975e-2835.51Hydroxyacylglutathione hydrolase OS=Herminiimonas ... [more]
GLO2_ECOSE3.975e-2835.51Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECOLC3.975e-2835.98Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_LEGPA5.192e-2836.98Hydroxyacylglutathione hydrolase OS=Legionella pne... [more]
GLO2_ECOSM5.192e-2835.51Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECOL55.192e-2835.51Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO815.192e-2835.51Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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