FC920257

Overview
NameFC920257
Unique NameFC920257
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length502
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10304 contig Ccv1_Contig10304:67..568. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA1_BACC2 (Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus cereus (strain G9842) GN=hemL1 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 3.688e-31
Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 2 
Query:  164 AFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            AF  A++LMPGGVNSPVRAFKSVG  P+  +  KGS ++DIDGNEYIDYV SWGP I G  +D+V+ AL    ++GTSFGAP  +EN LA++VI  VPS E+   VNSGT+A
Sbjct:   10 AFEEAQDLMPGGVNSPVRAFKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKSVAERGTSFGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEA 121
[Close]
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA2_BACHK (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus thuringiensis subsp. konkukian GN=hemL2 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.817e-31
Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 2 
Query:  164 AFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            AF  A++LMPGGVNSPVRAFKSVG  P+  +  KGS ++DIDGNEYIDYV SWGP I G  +D+V+ AL    ++GTSFGAP  +EN LA++VI  VPS E+   VNSGT+A
Sbjct:   10 AFEEAQDLMPGGVNSPVRAFKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEA 121
[Close]
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA2_BACCZ (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus cereus (strain ZK / E33L) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.817e-31
Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 2 
Query:  164 AFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            AF  A++LMPGGVNSPVRAFKSVG  P+  +  KGS ++DIDGNEYIDYV SWGP I G  +D+V+ AL    ++GTSFGAP  +EN LA++VI  VPS E+   VNSGT+A
Sbjct:   10 AFEEAQDLMPGGVNSPVRAFKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEA 121
[Close]
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA2_BACCQ (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus cereus (strain Q1) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.817e-31
Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 2 
Query:  164 AFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            AF  A++LMPGGVNSPVRAFKSVG  P+  +  KGS ++DIDGNEYIDYV SWGP I G  +D+V+ AL    ++GTSFGAP  +EN LA++VI  VPS E+   VNSGT+A
Sbjct:   10 AFEEAQDLMPGGVNSPVRAFKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEA 121
[Close]
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA2_BACC7 (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus cereus (strain AH187) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.817e-31
Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 2 
Query:  164 AFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            AF  A++LMPGGVNSPVRAFKSVG  P+  +  KGS ++DIDGNEYIDYV SWGP I G  +D+V+ AL    ++GTSFGAP  +EN LA++VI  VPS E+   VNSGT+A
Sbjct:   10 AFEEAQDLMPGGVNSPVRAFKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEA 121
[Close]
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA2_BACC3 (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus cereus (strain 03BB102) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.817e-31
Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 2 
Query:  164 AFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            AF  A++LMPGGVNSPVRAFKSVG  P+  +  KGS ++DIDGNEYIDYV SWGP I G  +D+V+ AL    ++GTSFGAP  +EN LA++VI  VPS E+   VNSGT+A
Sbjct:   10 AFEEAQDLMPGGVNSPVRAFKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEA 121
[Close]
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA2_BACC0 (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus cereus (strain AH820) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.817e-31
Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 2 
Query:  164 AFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            AF  A++LMPGGVNSPVRAFKSVG  P+  +  KGS ++DIDGNEYIDYV SWGP I G  +D+V+ AL    ++GTSFGAP  +EN LA++VI  VPS E+   VNSGT+A
Sbjct:   10 AFEEAQDLMPGGVNSPVRAFKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEA 121
[Close]
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA2_BACAN (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus anthracis GN=hemL2 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.817e-31
Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 2 
Query:  164 AFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            AF  A++LMPGGVNSPVRAFKSVG  P+  +  KGS ++DIDGNEYIDYV SWGP I G  +D+V+ AL    ++GTSFGAP  +EN LA++VI  VPS E+   VNSGT+A
Sbjct:   10 AFEEAQDLMPGGVNSPVRAFKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEA 121
[Close]
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA2_BACAH (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus thuringiensis (strain Al Hakam) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.817e-31
Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 2 
Query:  164 AFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            AF  A++LMPGGVNSPVRAFKSVG  P+  +  KGS ++DIDGNEYIDYV SWGP I G  +D+V+ AL    ++GTSFGAP  +EN LA++VI  VPS E+   VNSGT+A
Sbjct:   10 AFEEAQDLMPGGVNSPVRAFKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEA 121
[Close]
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA2_BACAC (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.817e-31
Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 2 
Query:  164 AFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            AF  A++LMPGGVNSPVRAFKSVG  P+  +  KGS ++DIDGNEYIDYV SWGP I G  +D+V+ AL    ++GTSFGAP  +EN LA++VI  VPS E+   VNSGT+A
Sbjct:   10 AFEEAQDLMPGGVNSPVRAFKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEA 121
The following BLAST results are available for this feature:
BLAST of FC920257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA1_BACC23.688e-3160.71Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Baci... [more]
GSA2_BACHK4.817e-3160.71Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]
GSA2_BACCZ4.817e-3160.71Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]
GSA2_BACCQ4.817e-3160.71Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]
GSA2_BACC74.817e-3160.71Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]
GSA2_BACC34.817e-3160.71Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]
GSA2_BACC04.817e-3160.71Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]
GSA2_BACAN4.817e-3160.71Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]
GSA2_BACAH4.817e-3160.71Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]
GSA2_BACAC4.817e-3160.71Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionC32006A03EF RVDevelop1 Citrus clementina cDNA clone C32006A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920257 ID=FC920257; Name=FC920257; organism=Citrus clementina; type=EST; length=502bp
GGCAGCTACAATTACAGGGGTAGGAGTTGGGTTAGGGTTTTCATGTTCAT
CAAAGCTCACCAAGAGAATTTCTTCTTCTACTGGATCCTCTCGCTGTAGT
GTTAAAATGTCGGTCTCTGTTGAGGAGCAGAAGAAAAATATCACTTTAAA
AAACTCTGAAGAAGCTTTCAATGTCGCCAAGGAATTGATGCCTGGAGGTG
TAAATTCACCTGTACGTGCCTTCAAATCTGTTGGTGGTCAACCTATTGAG
TTTGATTCCGTCAAGGGCTCACACATGTGGGATATCGATGGCAACGAGTA
CATTGACTATGTAGGTTCTTGGGGGCCGGCAATTATTGGTCAGCCAGATG
ATCAGGTACTAGCAGCCTTGGGTGAAACAATGAAGAAAGGAACCAGCTTT
GGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAGAAATGGTAATCTCAGC
TGTTCCAAGCAGAGAAATGCGTTGTTTTGTTAACTCAGGCACACAAGCAT
GC
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