FC920262
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL11_HUMAN (ADP-ribosylation factor-like protein 11 OS=Homo sapiens GN=ARL11 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.128e-20 Identity = 50/134 (37.31%), Postives = 83/134 (61.94%), Query Frame = 3 Query: 225 KQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKV-TKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLK 623 K E ++ ++GL +AGKT+L+ + G + +PTVGFN+ + G+V++ LWD+GGQ R+ W+ Y +VYV+D+ D L S +EL ++LN P+++G+P LVL NK + P AL + + + L+ Sbjct: 10 KAEAQVVMMGLDSAGKTTLLYKLK-GHQLVETLPTVGFNVEPLKAPGHVSLTLWDVGGQAPLRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLANKQEAPDALPLLKIRNRLSLE 142
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARF4_BOVIN (ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE=2 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 5.128e-20 Identity = 47/140 (33.57%), Postives = 80/140 (57.14%), Query Frame = 3 Query: 219 FFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGR 638 F K++M + ++GL AGKT+++ + G IPT+GFN+ V N+ +WD+GGQ + R +W Y + +++VVD+ D + + EL +L + L LL+ NK D P A++ +TD++GL+S+ R Sbjct: 13 FGKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAEELQKMLQEDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNR 151
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: SAR1_CRYNE (Small COPII coat GTPase SAR1 OS=Cryptococcus neoformans GN=SAR1 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.697e-20 Identity = 52/144 (36.11%), Postives = 86/144 (59.72%), Query Frame = 3 Query: 207 SAASFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGR 638 ++ + +L +GL NAGKT+L++++ + + PT+ ++ GNV +DLGG + R +W Y V IV++VD+AD + + S++EL LL+ SL+ +P L+LGNKID GA+S++ L E+GL TG+ Sbjct: 12 ASLGLMNKSAKLLFLGLDNAGKTTLLHMLKNDRLAT-LQPTLHPTSEELAIGNVKFTTYDLGGHIQARRLWRDYFPEVDGIVFLVDSADAERFAESKAELDSLLSIESLAQVPFLILGNKIDAYGAVSEEQLRHELGLYQTTGK 154
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL6_BOVIN (ADP-ribosylation factor-like protein 6 OS=Bos taurus GN=ARL6 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.697e-20 Identity = 45/138 (32.61%), Postives = 89/138 (64.49%), Query Frame = 3 Query: 225 KQEMELSLIGLQNAGKTSLVNVVA-TGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLS--GIPLLVLGNKIDKPGALSKQALTDEMGLKSI 629 K+E+ + +GL N+GKT+++N + + S+D++PT+GF+++K +++ ++D+ GQ R+R++WE Y + AI++V+D++D + +++ EL LLN P + IP+L NK+D AL+ ++ + L+ I Sbjct: 15 KKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIQKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDKLRMVVAKEELRTLLNHPDIKHRRIPILFFANKMDLRDALTSVKVSQLLCLEDI 152
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL4D_PONAB (ADP-ribosylation factor-like protein 4D OS=Pongo abelii GN=ARL4D PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.697e-20 Identity = 52/148 (35.14%), Postives = 85/148 (57.43%), Query Frame = 3 Query: 207 SAASFFK--QEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVT-----KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSI 629 +A+SF Q + + +IGL +AGKTSL+ + + + +PT GFN K+ +T ++WD+GGQ + R +W Y R +V+VVDAA+ + L ++ ELH + G+P+LVL NK D+PGALS + + ++ + Sbjct: 11 TASSFLPHFQALHVVVIGLDSAGKTSLLYRLKFKEFVQS-VPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVREL 157
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL4D_HUMAN (ADP-ribosylation factor-like protein 4D OS=Homo sapiens GN=ARL4D PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 6.697e-20 Identity = 52/148 (35.14%), Postives = 85/148 (57.43%), Query Frame = 3 Query: 207 SAASFFK--QEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVT-----KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSI 629 +A+SF Q + + +IGL +AGKTSL+ + + + +PT GFN K+ +T ++WD+GGQ + R +W Y R +V+VVDAA+ + L ++ ELH + G+P+LVL NK D+PGALS + + ++ + Sbjct: 11 TASSFLPHFQALHVVVIGLDSAGKTSLLYRLKFKEFVQS-VPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVREL 157
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL2_MOUSE (ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.697e-20 Identity = 49/135 (36.30%), Postives = 79/135 (58.52%), Query Frame = 3 Query: 225 KQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSI 629 ++E+ L ++GL NAGKT+++ G + + PT+GFN++ + + +WD+GGQ RS W Y + +++VVD+AD + + EL LL + L+G LL+ NK D PGALS A+ + + L SI Sbjct: 14 ERELRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSI 147
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL1_RAT (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus GN=Arl1 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.697e-20 Identity = 51/141 (36.17%), Postives = 80/141 (56.74%), Query Frame = 3 Query: 219 FFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGRE 641 F +EM + ++GL AGKT+++ + G IPT+GFN+ VT N+ ++WDLGGQ R W Y A++YVVD+ D D + IS+SEL +L + L L+V NK D A++ + + +GL ++ R+ Sbjct: 13 FGTREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRK 152
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL1_MOUSE (ADP-ribosylation factor-like protein 1 OS=Mus musculus GN=Arl1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.697e-20 Identity = 51/141 (36.17%), Postives = 80/141 (56.74%), Query Frame = 3 Query: 219 FFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGRE 641 F +EM + ++GL AGKT+++ + G IPT+GFN+ VT N+ ++WDLGGQ R W Y A++YVVD+ D D + IS+SEL +L + L L+V NK D A++ + + +GL ++ R+ Sbjct: 13 FGTREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRK 152
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.746e-20 Identity = 47/133 (35.34%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 222 FKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGL 620 +K+ +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD + L S+ EL L+ +++ +P+L+LGNKID+P A+S++ L + GL Sbjct: 22 YKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGL 153 The following BLAST results are available for this feature:
BLAST of FC920262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920262 ID=FC920262; Name=FC920262; organism=Citrus clementina; type=EST; length=654bpback to top |