FC920265
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920265 vs. ExPASy Swiss-Prot
Match: KCAB1_MOUSE (Voltage-gated potassium channel subunit beta-1 OS=Mus musculus GN=Kcnab1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.575e-16 Identity = 65/222 (29.28%), Postives = 106/222 (47.75%), Query Frame = 2 Query: 38 VKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKAL--KGGMRERVELATKFGISYADGKREI-RG-DPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWSRD-VEAEIVPTCRELGIGIVAYSPLGRGFFS 670 +K LG GL VS GLG +G + L+ A SG+ L DT+++Y E++LG + KG R + + TK Y GK E RG + + SL+RL ++ +D+ + +R D+ P+E + + ++ +G Y G S SA I A++V P Q E+ L+ R+ VE ++ ++G+G + +SPL G S Sbjct: 71 MKYRNLGKSGLRVSCLGLGTW---VTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKL---YWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIIS 286
BLAST of FC920265 vs. ExPASy Swiss-Prot
Match: KCAB1_BOVIN (Voltage-gated potassium channel subunit beta-1 OS=Bos taurus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.575e-16 Identity = 65/222 (29.28%), Postives = 106/222 (47.75%), Query Frame = 2 Query: 38 VKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKAL--KGGMRERVELATKFGISYADGKREI-RG-DPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWSRD-VEAEIVPTCRELGIGIVAYSPLGRGFFS 670 +K LG GL VS GLG +G + L+ A SG+ L DT+++Y E++LG + KG R + + TK Y GK E RG + + SL+RL ++ +D+ + +R D+ P+E + + ++ +G Y G S SA I A++V P Q E+ L+ R+ VE ++ ++G+G + +SPL G S Sbjct: 71 MKYRNLGKSGLRVSCLGLGTW---VTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKL---YWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIIS 286
BLAST of FC920265 vs. ExPASy Swiss-Prot
Match: YGHZ_ECOLI (Uncharacterized protein yghZ OS=Escherichia coli (strain K12) GN=yghZ PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15 Identity = 59/216 (27.31%), Postives = 103/216 (47.69%), Query Frame = 2 Query: 56 GSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTN--EILLGKALK---GGMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAV-----HPITAVQLEWSLWSRDVE-AEIVPTCRELGIGIVAYSPLGRGFFS 670 G GL + A LG +G A++ A + GIT D ++ YGP E G+ L+ R+ + ++TK G G G Y A+ + SLKR+ ++ +D++Y HR+D P+E T L V+ GK Y+G+S S ++ + P+ Q ++L +R V+ + ++ T + G+G +A++PL +G + Sbjct: 19 GKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLT 231
BLAST of FC920265 vs. ExPASy Swiss-Prot
Match: KCAB1_RABIT (Voltage-gated potassium channel subunit beta-1 OS=Oryctolagus cuniculus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15 Identity = 64/217 (29.49%), Postives = 104/217 (47.93%), Query Frame = 2 Query: 53 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKAL--KGGMRERVELATKFGISYADGKREI-RG-DPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWSRD-VEAEIVPTCRELGIGIVAYSPLGRGFFS 670 LG GL VS GLG +G + L+ A SG+ L DT+++Y E++LG + KG R + + TK Y GK E RG + + SL+RL ++ +D+ + +R D+ P+E + + ++ +G Y G S SA I A++V P Q E+ L+ R+ VE ++ ++G+G + +SPL G S Sbjct: 94 LGKSGLRVSCLGLGTW---VTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKL---YWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIIS 304
BLAST of FC920265 vs. ExPASy Swiss-Prot
Match: KCAB1_MUSPU (Voltage-gated potassium channel subunit beta-1 OS=Mustela putorius GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15 Identity = 64/217 (29.49%), Postives = 104/217 (47.93%), Query Frame = 2 Query: 53 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKAL--KGGMRERVELATKFGISYADGKREI-RG-DPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWSRD-VEAEIVPTCRELGIGIVAYSPLGRGFFS 670 LG GL VS GLG +G + L+ A SG+ L DT+++Y E++LG + KG R + + TK Y GK E RG + + SL+RL ++ +D+ + +R D+ P+E + + ++ +G Y G S SA I A++V P Q E+ L+ R+ VE ++ ++G+G + +SPL G S Sbjct: 83 LGKSGLRVSCLGLGTW---VTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKL---YWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIIS 293
BLAST of FC920265 vs. ExPASy Swiss-Prot
Match: KCAB1_HUMAN (Voltage-gated potassium channel subunit beta-1 OS=Homo sapiens GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15 Identity = 64/217 (29.49%), Postives = 104/217 (47.93%), Query Frame = 2 Query: 53 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKAL--KGGMRERVELATKFGISYADGKREI-RG-DPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWSRD-VEAEIVPTCRELGIGIVAYSPLGRGFFS 670 LG GL VS GLG +G + L+ A SG+ L DT+++Y E++LG + KG R + + TK Y GK E RG + + SL+RL ++ +D+ + +R D+ P+E + + ++ +G Y G S SA I A++V P Q E+ L+ R+ VE ++ ++G+G + +SPL G S Sbjct: 94 LGKSGLRVSCLGLGTW---VTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKL---YWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIIS 304
BLAST of FC920265 vs. ExPASy Swiss-Prot
Match: KCAB2_XENLA (Voltage-gated potassium channel subunit beta-2 OS=Xenopus laevis GN=kcnab2 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 64/217 (29.49%), Postives = 106/217 (48.85%), Query Frame = 2 Query: 53 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALK--GGMRERVELATKFGISYADGKREI-RG-DPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWSRD-VEAEIVPTCRELGIGIVAYSPLGRGFFS 670 LG GL VS GLG +G + L+ A ++GI L DT+++Y E++LG +K G R + + TK + GK E RG + +ASL+RL +D +D+ + +R D P+E T+ + ++ +G Y G S S+ I A++V P Q E+ ++ R+ VE ++ ++G+G + +SPL G S Sbjct: 42 LGKSGLRVSCLGLGTW---VTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKI---FWGGKAETERGLSRKHIIEGLKASLERLQLDYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVS 252
BLAST of FC920265 vs. ExPASy Swiss-Prot
Match: AAD_PHACH (Aryl-alcohol dehydrogenase [NADP+] OS=Phanerochaete chrysosporium PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.910e-15 Identity = 60/219 (27.40%), Postives = 105/219 (47.95%), Query Frame = 2 Query: 65 GLEVSAQGLGCMGMSAFYGP----PKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISYADGK--REIRGDPAYARAACEA-------SLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAH------AVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRG 661 GL VS LG M + + P + L+ N+G +DT+++Y T+E +G+ ++ G R+++ +ATK+ + Y G EI Y + ++ SL++L ID++Y H D IE + L LV +GK+ Y+G+S+ A + +A+ P + EW++ RD+E +I+P C G+ I ++ L G Sbjct: 25 GLHVSPIQLGAMSIGDKWHPYGMGTMDKEASFKLLDAFYNAGGNFIDTANVYQDETSEEFIGEWMEARGNRDQMVVATKYSLVYKRGASFEEIPQKTQYVGNSLKSMHISVHDSLRKLRTSYIDIFYVHFWDYTCTIEEVMNGLHNLVAQGKVLYLGVSDTPAWVVSKANNYARMAGKTPFVIYEGEWNITMRDMERDIIPMCIHEGMAIAPWNVLCAG 243
BLAST of FC920265 vs. ExPASy Swiss-Prot
Match: KCAB_ORYSJ (Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica GN=KOB1 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15 Identity = 64/213 (30.05%), Postives = 99/213 (46.48%), Query Frame = 2 Query: 53 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALK--GGMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASA-------STIRRAHAVHPITAVQLEWSLWSR-DVEAEIVPTCRELGIGIVAYSPLGRG 661 LG GL VS G +G + AL+ ++G+ D +++Y E ++G+A++ G R V ++TK G + + SLKRLD+D +D+ Y HR D P+E T+ + +++ G Y G SE SA S R V PI Q E++L+SR VE+E +P G+G+ +SPL G Sbjct: 6 LGRSGLRVSQLSYGAW---VTFGNQLDVKEAKALLQACRDAGVNFFDNAEVYANGRAEEIMGQAMRDLGWRRSDVVVSTKLFWG-GQGPNDKGLSRKHIVEGLRGSLKRLDMDYVDVVYCHRPDATTPVEETVRAMNWVIDHGMAFYWGTSEWSAQQITEAWSVANRLDLVGPIVE-QPEYNLFSRHKVESEFLPLYSTYGLGLTTWSPLASG 213
BLAST of FC920265 vs. ExPASy Swiss-Prot
Match: KCAB2_HUMAN (Voltage-gated potassium channel subunit beta-2 OS=Homo sapiens GN=KCNAB2 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15 Identity = 63/217 (29.03%), Postives = 106/217 (48.85%), Query Frame = 2 Query: 53 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALK--GGMRERVELATKFGISYADGKREI-RG-DPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAV------HPITAVQLEWSLWSRD-VEAEIVPTCRELGIGIVAYSPLGRGFFS 670 LG GL VS GLG +G + L+ A ++GI L DT+++Y E++LG +K G R + + TK + GK E RG + +ASL+RL ++ +D+ + +R D P+E T+ + ++ +G Y G S S+ I A++V P Q E+ ++ R+ VE ++ ++G+G + +SPL G S Sbjct: 42 LGKSGLRVSCLGLGTW---VTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKI---FWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVS 252 The following BLAST results are available for this feature:
BLAST of FC920265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920265 ID=FC920265; Name=FC920265; organism=Citrus clementina; type=EST; length=694bpback to top |