FC920285
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_PINTA (60S ribosomal protein L10 OS=Pinus taeda GN=RPL10 PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 6.485e-88 Identity = 160/209 (76.56%), Postives = 173/209 (82.78%), Query Frame = 3 Query: 60 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGFHQV*PQ*LFEVQVREPYCARWCYAKLLGCHGPLASR 686 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRI+DVG KK+ VDEFPFCVHL SWEKENVSSEALEA RIACNKYM KFAGKD FHLRVRVHPFHVLR NKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVR +D++S HAQEALRRAKFKFPGR+K +K GF + + + KLLGC GPL++R Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGAKKRLVDEFPFCVHLVSWEKENVSSEALEAGRIACNKYMVKFAGKDGFHLRVRVHPFHVLRSNKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRSRDNHSNHAQEALRRAKFKFPGREKIIVNRKWGFTKYTRADYLKWKTENRIVPDGVNPKLLGCRGPLSNR 209
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_MAIZE (60S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=2 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.597e-86 Identity = 160/209 (76.56%), Postives = 170/209 (81.34%), Query Frame = 3 Query: 60 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGFHQV*PQ*LFEVQVREPYCARWCYAKLLGCHGPLASR 686 MGRRPARCYRQIKNKP PKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHL SWE+ENVSSEALEAARI CNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD+N+ HA EALRRAKFKFP RQK +K GF + + + AKLL HG L R Sbjct: 1 MGRRPARCYRQIKNKPCPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWERENVSSEALEAARIVCNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPARQKIIESRKWGFTKFSRADYLKYKSEGRIVPDGVNAKLLANHGRLEKR 209
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_CAEEL (60S ribosomal protein L10 OS=Caenorhabditis elegans GN=rpl-10 PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 5.071e-75 Identity = 127/173 (73.41%), Postives = 139/173 (80.35%), Query Frame = 3 Query: 60 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGF 578 MGRRPARCYR IKNKPYPKSRFCRGVPD KIRI+D+G K+ VD FP CVH+ S E+E++SSEALEAARI NKYM K GKD FHLRVR HPFHV RINKMLSCAGADRLQTGMRGA+GKPQG ARV IG +L S+R K+ N HA EA RRAKFKFPGRQ +K GF Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHLSSEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGKPQGLVARVDIGDILFSMRIKEGNVKHAIEAFRRAKFKFPGRQIIVSSRKWGF 173 HSP 2 Score: 43.1282 bits (100), Expect = 5.071e-75 Identity = 18/31 (58.06%), Postives = 23/31 (74.19%), Query Frame = 1 Query: 553 IIVSRKWGFTKFSRSDYLRFKSENRIVPDGV 645 I+ SRKWGFTK+ R DY R ++E R+ DGV Sbjct: 165 IVSSRKWGFTKWDREDYERMRAEGRLRSDGV 195
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10L_MACFA (60S ribosomal protein L10-like OS=Macaca fascicularis GN=RPL10L PE=2 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 3.454e-73 Identity = 136/206 (66.02%), Postives = 154/206 (74.76%), Query Frame = 3 Query: 60 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGFHQV*PQ*LFEVQVREPYCARWCYAKLLGCHGPL 677 MGRRPARCYR KNKPYPKSRFCRGVPD KIRI+D+G KK VDEFP C H+ S E E +SSEALEAARI NKYM K G+D FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQK H +K GF + ++ ++ C K + HGPL Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGRDGFHMRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAKKRLIPDGCGVKYVPSHGPL 206
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_RAT (60S ribosomal protein L10 OS=Rattus norvegicus GN=Rpl10 PE=1 SV=3) HSP 1 Score: 271.552 bits (693), Expect = 2.924e-72 Identity = 136/206 (66.02%), Postives = 152/206 (73.79%), Query Frame = 3 Query: 60 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGFHQV*PQ*LFEVQVREPYCARWCYAKLLGCHGPL 677 MGRRPARCYR KNKPYPKSRFCRGVPD KIRI+D+G KK VDEFP C H+ S E E +SSEALEAARI NKYM K GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQK H +K GF + ++ + C K + GPL Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPL 206
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_PAPAN (60S ribosomal protein L10 OS=Papio anubis GN=RPL10 PE=3 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 2.924e-72 Identity = 136/206 (66.02%), Postives = 152/206 (73.79%), Query Frame = 3 Query: 60 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGFHQV*PQ*LFEVQVREPYCARWCYAKLLGCHGPL 677 MGRRPARCYR KNKPYPKSRFCRGVPD KIRI+D+G KK VDEFP C H+ S E E +SSEALEAARI NKYM K GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQK H +K GF + ++ + C K + GPL Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPL 206
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_MOUSE (60S ribosomal protein L10 OS=Mus musculus GN=Rpl10 PE=2 SV=3) HSP 1 Score: 271.552 bits (693), Expect = 2.924e-72 Identity = 136/206 (66.02%), Postives = 152/206 (73.79%), Query Frame = 3 Query: 60 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGFHQV*PQ*LFEVQVREPYCARWCYAKLLGCHGPL 677 MGRRPARCYR KNKPYPKSRFCRGVPD KIRI+D+G KK VDEFP C H+ S E E +SSEALEAARI NKYM K GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQK H +K GF + ++ + C K + GPL Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPL 206
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_HUMAN (60S ribosomal protein L10 OS=Homo sapiens GN=RPL10 PE=1 SV=4) HSP 1 Score: 271.552 bits (693), Expect = 2.924e-72 Identity = 136/206 (66.02%), Postives = 152/206 (73.79%), Query Frame = 3 Query: 60 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGFHQV*PQ*LFEVQVREPYCARWCYAKLLGCHGPL 677 MGRRPARCYR KNKPYPKSRFCRGVPD KIRI+D+G KK VDEFP C H+ S E E +SSEALEAARI NKYM K GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQK H +K GF + ++ + C K + GPL Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPL 206
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_SHEEP (60S ribosomal protein L10 OS=Ovis aries GN=RPL10 PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 4.988e-72 Identity = 136/206 (66.02%), Postives = 151/206 (73.30%), Query Frame = 3 Query: 60 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGFHQV*PQ*LFEVQVREPYCARWCYAKLLGCHGPL 677 MGRRPARCYR KNKPYPKSRFCRGVPD KIRI+D+G KK VDEFP C H+ S E E +SSEALEAARI NKYM K GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQK H +K GF + + + C K + GPL Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFENMVAEKRLIPDGCGVKYIPNRGPL 206
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_PIG (60S ribosomal protein L10 OS=Sus scrofa GN=RPL10 PE=2 SV=3) HSP 1 Score: 270.781 bits (691), Expect = 4.988e-72 Identity = 136/206 (66.02%), Postives = 151/206 (73.30%), Query Frame = 3 Query: 60 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGFHQV*PQ*LFEVQVREPYCARWCYAKLLGCHGPL 677 MGRRPARCYR KNKPYPKSRFCRGVPD KIRI+D+G KK VDEFP C H+ S E E +SSEALEAARI NKYM K GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K N H EALRRAKFKFPGRQK H +K GF + + + C K + GPL Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFENMVAEKRLIPDGCGVKYIPNRGPL 206 The following BLAST results are available for this feature:
BLAST of FC920285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920285 ID=FC920285; Name=FC920285; organism=Citrus clementina; type=EST; length=700bpback to top |