FC920285
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_PYRCJ (50S ribosomal protein L10e OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.517e-31 Identity = 73/161 (45.34%), Postives = 94/161 (58.39%), Query Frame = 3 Query: 60 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFP 539 M RPARCYR+IK PY + + G P +I +D+G F L + E+ + +ALEAAR +KY+ K+ G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQV+ V K + H +EALRRA K P Sbjct: 1 MPARPARCYRRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARAAFTMVAKLVAEERGQIRMQALEAARQISSKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVIFYVEFKPEHLAHVKEALRRAASKLP 161
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_PYRAR (50S ribosomal protein L10e OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl10e PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.616e-30 Identity = 71/158 (44.94%), Postives = 91/158 (57.59%), Query Frame = 3 Query: 69 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFP 539 RPARCYR+IK PY + + G P +I +D+G FP L E+ + +ALEAAR +KY+ K+ G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQ+L K + H +EA RRA K P Sbjct: 4 RPARCYRRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARATFPMVAKLIVEERGQIRMQALEAARQMASKYLTKYVGDANYYLRLNVIPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQILFYAEFKPEHLAHIKEAFRRAASKLP 161
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_THENV (50S ribosomal protein L10e OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl10e PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.723e-30 Identity = 70/158 (44.30%), Postives = 91/158 (57.59%), Query Frame = 3 Query: 69 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFP 539 RPARCY++IK PY + + G P +I +D+G FP L E+ + +ALEAAR KY++K+ G ++LR+ P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQV+ K + H +EALRRA K P Sbjct: 4 RPARCYKRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARAAFPLVAKLVVQERGQIRMQALEAARQMAYKYLSKYVGDANYYLRLEAVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEAGQVIFYAEFKPEHVAHMKEALRRASTKLP 161
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_METJA (50S ribosomal protein L10e OS=Methanocaldococcus jannaschii GN=rpl10e PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.169e-30 Identity = 69/157 (43.95%), Postives = 93/157 (59.24%), Query Frame = 3 Query: 69 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFP 539 RP RCYR + PY + + +GVP PK+ + +G EFP V+L + + ALEAAR+A NKY+ K G+ + ++RV+P +LR +KM + AGADR+ GMR AFGKP GT ARV GQ +L+V A+EALRRA K P Sbjct: 5 RPNRCYRDVDKPPYTRKEYVKGVPQPKVVHFIMGNLSA---EFPVKVNLVATRPIQIRHNALEAARVAANKYLTKMCGRMGYKFQIRVYPHQILREHKMATGAGADRISDGMRLAFGKPIGTAARVKEGQAILTVWVNPDKFPAAKEALRRAAMKLP 158
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_META3 (50S ribosomal protein L10e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl10e PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.374e-29 Identity = 72/164 (43.90%), Postives = 96/164 (58.54%), Query Frame = 3 Query: 60 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQK 551 M RP++CYR+I Y + ++ R VP PK+ Y G KG D FP VHL + + ALE+ARI NKY G+ + ++RV+P VLR NKM S AGADR+ GMR +FGK GT ARV GQ ++++ N +HA+EALRR K P + K Sbjct: 1 MALRPSKCYREINKPAYTRKKYIRAVPQPKVVHYVNG--NKGGD-FPVEVHLVVKDDIQIRHNALESARIVGNKYTQNKCGRLGYKFQIRVYPHQVLRENKMASGAGADRISDGMRLSFGKAVGTAARVRKGQKIITISTTPENVIHAKEALRRCNMKMPVKCK 161
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_PYRAE (50S ribosomal protein L10e OS=Pyrobaculum aerophilum GN=rpl10e PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29 Identity = 71/158 (44.94%), Postives = 91/158 (57.59%), Query Frame = 3 Query: 69 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGV-DEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFP 539 RPARCY++IK PY + + G P +I +D+G F L E+ + +ALEAAR +KY+ K+ G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQVL K + H +EALRRA K P Sbjct: 4 RPARCYKRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARTAFTMTAKLVVEERGQIRMQALEAARQMASKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVLFYAEFKPEHLPHIKEALRRAASKLP 161
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_PYRIL (50S ribosomal protein L10e OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl10e PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29 Identity = 70/158 (44.30%), Postives = 92/158 (58.23%), Query Frame = 3 Query: 69 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFP 539 RPARCYR+IK PY + + G P +I +D+G+ F L E+ + +ALEAAR KY++K+ G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQV+ + + H +EALRRA K P Sbjct: 4 RPARCYRRIKGPPYTREEYIHGAPMIQIPKFDMGVTSAAARAAFSMVAKLVVEERGQIRMQALEAARQMAYKYLSKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVIFYAEFRPEHIAHIKEALRRAASKLP 161
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_ARCFU (50S ribosomal protein L10e OS=Archaeoglobus fulgidus GN=rpl10e PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.222e-29 Identity = 67/160 (41.88%), Postives = 100/160 (62.50%), Query Frame = 3 Query: 60 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFP 539 M R+PAR +R+++ +PY ++ + G P ++R++D+G K +FP + L + E + ALEAAR+ NKY+++ AG + L++R+ P H+LR +KM AGADR+ GMR AFGKP G ARV G ++SV K + A+EALRRA K P Sbjct: 1 MARKPARMWRRLE-RPYTRTEYIDGAPGTRVRMFDMGNKSA---DFPVMLTLVAKEAVQIRENALEAARVVANKYVSRRAGASNYKLKLRIFPHHILREHKMAVGAGADRISQGMRAAFGKPVGRAARVKPGTKIMSVWVKPEHFEIAKEALRRAAMKMP 156
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_CALMQ (50S ribosomal protein L10e OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl10e PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.888e-27 Identity = 69/161 (42.86%), Postives = 96/161 (59.63%), Query Frame = 3 Query: 60 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKK-KGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFP 539 M RPARCY++IK +PY + ++ G P +I +++G K K + F L E + ALEAAR KY++K F+L++ +P HV+R NKML+ AGADRLQ GMR AFG P G ++ G+VL+ V +D N HA+EAL RA+ K P Sbjct: 1 MPLRPARCYKRIK-RPYTRLKYIHGAPYVQIPRFEMGATKAKDRERFTSVAVLRVLEGGQIRVNALEAARQMAYKYLSKVLTDQNFYLKIIKYPHHVIRENKMLAMAGADRLQEGMRLAFGVPTGRAIQIEPGEVLMIVEVEDRNITHAKEALNRARAKLP 160
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_THEAC (50S ribosomal protein L10e OS=Thermoplasma acidophilum GN=rpl10e PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 6.384e-27 Identity = 67/160 (41.88%), Postives = 96/160 (60.00%), Query Frame = 3 Query: 60 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFP 539 M +PAR Y +I Y + F GVP PKI + G +KK +FP + L + E + ALEAAR++ N+ M + AG D F+L+V +P HVLR +KM + AGADR+ +GMR AFG+P GT ARV V++ R ++++ + ALR+A K P Sbjct: 1 MVTKPARMYSRITGPAYTRKEFMGGVPYPKITTFVQGNQKK---DFPIEMRLVAEEPCQIRHTALEAARVSVNRRMTEAAGLDYFYLKVVPYPHHVLREHKMATGAGADRISSGMRAAFGRPVGTAARVYPDDVIMIARTDEAHAKELKTALRKAAIKLP 157 The following BLAST results are available for this feature:
BLAST of FC920285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920285 ID=FC920285; Name=FC920285; organism=Citrus clementina; type=EST; length=700bpback to top |