FC920289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920289 vs. ExPASy Swiss-Prot
Match: SERC_LACH4 (Phosphoserine aminotransferase OS=Lactobacillus helveticus (strain DPC 4571) GN=serC PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.140e-24 Identity = 51/107 (47.66%), Postives = 76/107 (71.03%), Query Frame = 1 Query: 256 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEA 576 V+NFAAGPA LP+ V+ + Q EL + +GSGMS++E+SHR + F II+ A+ D++ L+++P Y +LF QGG T QFAAVP+NL T + + + +G W+ +A EA Sbjct: 3 VYNFAAGPATLPDPVIKQIQEELPSLQGSGMSILEISHRSQMFDKIIDTAKQDIKDLMHVPDNYHILFFQGGGTGQFAAVPMNLATKHKRIALLDSGHWATRAGDEA 109
BLAST of FC920289 vs. ExPASy Swiss-Prot
Match: SERC_LACPL (Phosphoserine aminotransferase OS=Lactobacillus plantarum GN=serC PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.808e-23 Identity = 51/109 (46.79%), Postives = 75/109 (68.81%), Query Frame = 1 Query: 256 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQK 582 ++NF+AGPA LP+ V+ + Q+EL ++R SGMS++E+SHR F +++ AE DLR L+ IP Y VLF QGG T QF A PLNL P+ + + +G W+ +A EA++ Sbjct: 3 IYNFSAGPAVLPQPVITQIQAELPSFRDSGMSILEISHRSDLFAQVLQDAEQDLRDLMAIPDNYHVLFFQGGGTLQFTAAPLNL-APHHRIGLLDSGHWAQRAADEAKR 110
BLAST of FC920289 vs. ExPASy Swiss-Prot
Match: SERC_DESOH (Phosphoserine aminotransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=serC PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.272e-22 Identity = 51/109 (46.79%), Postives = 72/109 (66.06%), Query Frame = 1 Query: 253 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQ 579 R++NF GPA LP VL + Q+ ++ G+GMS+ E+SHR K F +II A + ++ LL I ++ VLF+QGGA+ QFA VP+NL DY+ TG+WS KA KE + Sbjct: 4 RIYNFNPGPAALPLSVLEEIQATFLDFAGTGMSITEVSHRSKPFDAIINDAVTRVKRLLGIGDDFKVLFVQGGASMQFAMVPMNLLPDGKSADYVNTGTWSTKAIKETK 112
BLAST of FC920289 vs. ExPASy Swiss-Prot
Match: SERC_CAMLR (Phosphoserine aminotransferase OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=serC PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.633e-22 Identity = 52/122 (42.62%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 253 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKF-CNPQVICSGK 615 RV NF+AGP+NLP++VL +AQ LY++ G G S+ME+SHRGK F+ + +A + L + +Y VL +QGGA+ QFA +P+NL ++ TG W+ KA KEA+ N +++ S + Sbjct: 2 RVMNFSAGPSNLPDEVLKEAQEHLYDYHGKGFSIMEVSHRGKVFEEVHFEAIKMAKELYGVNDDYEVLLMQGGASLQFAMIPMNLYM-GGVCEFANTGVWTKKAIKEAEILGVNTKIVASSQ 122
BLAST of FC920289 vs. ExPASy Swiss-Prot
Match: SERC_BACFR (Phosphoserine aminotransferase OS=Bacteroides fragilis GN=serC PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.280e-21 Identity = 49/108 (45.37%), Postives = 75/108 (69.44%), Query Frame = 1 Query: 262 NFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKF 585 NF+AGP+ LP +V+ + + ++ GSG+SV+E+SHRGK+F++++++A + + +LNIP+ YSVLFL GGA+ QF VP N Y+ TG W+ KA KEA+ F Sbjct: 5 NFSAGPSILPREVIEETAKAILDFNGSGLSVLEVSHRGKDFQAVMDEAVALFKEILNIPEGYSVLFLGGGASMQFCMVPYNFL--EKKAAYLNTGVWAKKAMKEAKGF 110
BLAST of FC920289 vs. ExPASy Swiss-Prot
Match: SERC_BACFN (Phosphoserine aminotransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=serC PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.280e-21 Identity = 49/108 (45.37%), Postives = 75/108 (69.44%), Query Frame = 1 Query: 262 NFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKF 585 NF+AGP+ LP +V+ + + ++ GSG+SV+E+SHRGK+F++++++A + + +LNIP+ YSVLFL GGA+ QF VP N Y+ TG W+ KA KEA+ F Sbjct: 5 NFSAGPSILPREVIEETAKAILDFNGSGLSVLEVSHRGKDFQAVMDEAVALFKEILNIPEGYSVLFLGGGASMQFCMVPYNFL--EKKAAYLNTGVWAKKAMKEAKGF 110
BLAST of FC920289 vs. ExPASy Swiss-Prot
Match: SERC_CAMJD (Phosphoserine aminotransferase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=serC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.284e-21 Identity = 50/109 (45.87%), Postives = 72/109 (66.06%), Query Frame = 1 Query: 253 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQ 579 R NF+AGP+ LP ++L +AQ E +++G G S+ME+SHR K F+ + A+ + L + +Y VLFLQGGA+ QFA +P+NL N +Y+ TG W+ KA KEAQ Sbjct: 2 RKINFSAGPSTLPLEILEQAQKEFCDYQGKGYSIMEISHRTKVFEEVHFGAQEKAKKLYGLNDDYEVLFLQGGASLQFAMIPMNLAL-NGVCEYVNTGVWTKKAIKEAQ 109
BLAST of FC920289 vs. ExPASy Swiss-Prot
Match: SERC_LACF3 (Phosphoserine aminotransferase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=serC PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.596e-21 Identity = 52/109 (47.71%), Postives = 72/109 (66.06%), Query Frame = 1 Query: 259 FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI-PQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQK 582 +NFAAGPA LP VL + Q EL +++GS +S++E+SHR F+ I ++A+ L L+ + EY+ LFLQGG T QF VPLNL + V Y TG WS +A +EA+K Sbjct: 4 YNFAAGPATLPRPVLEQVQRELLDYQGSQVSILEISHRSPVFREIYQQAKERLLQLMGLSADEYTPLFLQGGGTLQFTMVPLNLARDHHRVAYADTGHWSARAIEEAKK 112
BLAST of FC920289 vs. ExPASy Swiss-Prot
Match: SERC_CAMJJ (Phosphoserine aminotransferase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=serC PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.596e-21 Identity = 51/109 (46.79%), Postives = 72/109 (66.06%), Query Frame = 1 Query: 253 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQ 579 R NF+AGP+ LP ++L +AQ EL +++G G S+ME+SHR K F+ + A+ + L + +Y VLFLQGGA+ QFA +P+NL N +Y TG W+ KA KEAQ Sbjct: 2 RKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYGLNDDYEVLFLQGGASLQFAMIPMNLAL-NGVCEYANTGVWTKKAIKEAQ 109
BLAST of FC920289 vs. ExPASy Swiss-Prot
Match: SERC_CAMJE (Phosphoserine aminotransferase OS=Campylobacter jejuni GN=serC PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.596e-21 Identity = 51/109 (46.79%), Postives = 72/109 (66.06%), Query Frame = 1 Query: 253 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQ 579 R NF+AGP+ LP ++L +AQ EL +++G G S+ME+SHR K F+ + A+ + L + +Y VLFLQGGA+ QFA +P+NL N +Y TG W+ KA KEAQ Sbjct: 2 RKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLAL-NGVCEYANTGVWTKKAIKEAQ 109 The following BLAST results are available for this feature:
BLAST of FC920289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 255
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920289 ID=FC920289; Name=FC920289; organism=Citrus clementina; type=EST; length=628bpback to top |