FC920307

Overview
NameFC920307
Unique NameFC920307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11134 contig Ccv1_Contig11134:67..801. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP32_ARATH (Serine carboxypeptidase-like 32 OS=Arabidopsis thaliana GN=SCPL32 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.056e-39
Identity = 69/123 (56.10%), Postives = 85/123 (69.11%), Query Frame = 2
Query:  239 LFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            L++C +F    AF +    +   D V   PGQ   V+F HY+GYVTVN  SGRALFYWF EA+  P+ KPLVLWLNGGPGCSS+ YG  +EIGPF +   G +L  NPY+WN+ ANILFL+SP
Sbjct:   11 LYLCTLF----AFVSSDSPEAMRDLVTNFPGQP-KVSFRHYAGYVTVNIISGRALFYWFFEAMTHPNVKPLVLWLNGGPGCSSVGYGATQEIGPFLVDNKGNSLKFNPYAWNKEANILFLESP 128          

HSP 2 Score: 40.817 bits (94), Expect = 5.056e-39
Identity = 20/30 (66.67%), Postives = 20/30 (66.67%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            P GVGFSYSNTSSD    GD  TA DS  F
Sbjct:  128 PAGVGFSYSNTSSDYRKLGDDFTARDSYTF 157          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 6.590e-39
Identity = 63/100 (63.00%), Postives = 76/100 (76.00%), Query Frame = 2
Query:  308 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            DR+ +LPGQ   V+F  YSGY+TV+E +GR+LFY   EA ED    PLVLWLNGGPGCSS+AYG +EE+G F +KP G  L LN Y WN+VAN+LFLDSP
Sbjct:    9 DRIARLPGQPA-VDFDMYSGYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSP 107          

HSP 2 Score: 48.521 bits (114), Expect = 6.590e-39
Identity = 22/30 (73.33%), Postives = 24/30 (80.00%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            P GVGFSY+NTSSDI T+GD RTA DS  F
Sbjct:  107 PAGVGFSYTNTSSDIYTSGDNRTAHDSYAF 136          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: CBP23_HORVU (Serine carboxypeptidase II-3 OS=Hordeum vulgare GN=CXP;2-3 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.190e-38
Identity = 64/106 (60.38%), Postives = 79/106 (74.53%), Query Frame = 2
Query:  296 QQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAV--EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            +++ DRV  LPG    V+FA Y+GYVTV+  +GRALFY+  EAV      +KPL+LWLNGGPGCSS+ YG  EE+GPF +  DGKTLY NPYSWN  AN+LFL+SP
Sbjct:   80 RKEADRVEALPGHPRGVDFAQYAGYVTVDAAAGRALFYYLAEAVGGNGDKTKPLLLWLNGGPGCSSLGYGAMEELGPFRVMSDGKTLYSNPYSWNHAANVLFLESP 185          

HSP 2 Score: 40.817 bits (94), Expect = 4.190e-38
Identity = 17/30 (56.67%), Postives = 23/30 (76.67%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            P GVG+SYSNT++D   +GD  TAED+ +F
Sbjct:  185 PAGVGYSYSNTTADYGRSGDNGTAEDAYQF 214          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP40_ARATH (Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 5.461e-38
Identity = 62/103 (60.19%), Postives = 79/103 (76.70%), Query Frame = 2
Query:  299 QKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            +K D + +LPGQ   V+F  Y GYVTVNE +GR+ FY+FVEA +  DS PL+LWLNGGPGCSS+AYG  +E+GPF +  DGKTL+ N Y+WN  AN+LFL+SP
Sbjct:   77 RKRDLIRRLPGQP-PVSFDQYGGYVTVNESAGRSFFYYFVEASKSKDSSPLLLWLNGGPGCSSLAYGALQELGPFRVHSDGKTLFRNRYAWNNAANVLFLESP 178          

HSP 2 Score: 41.2022 bits (95), Expect = 5.461e-38
Identity = 17/30 (56.67%), Postives = 23/30 (76.67%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            P GVGFSY+NT+SD+  +GD+ TA D+  F
Sbjct:  178 PAGVGFSYTNTTSDLEKHGDRNTAADNYIF 207          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 9.274e-38
Identity = 61/100 (61.00%), Postives = 75/100 (75.00%), Query Frame = 2
Query:  308 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            DR+ +LPGQ   V+F  YSGY+TV+E +GR+LFY   EA E+    PLVLWLNGGPGCSS+AYG +EE+G F + P G  L LN Y WN+VAN+LFLDSP
Sbjct:   41 DRIVRLPGQP-EVDFDMYSGYITVDEAAGRSLFYLLQEAPEEAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVMPRGAGLVLNEYRWNKVANVLFLDSP 139          

HSP 2 Score: 48.521 bits (114), Expect = 9.274e-38
Identity = 22/30 (73.33%), Postives = 24/30 (80.00%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            P GVGFSY+NTSSDI T+GD RTA DS  F
Sbjct:  139 PAGVGFSYTNTSSDIYTSGDNRTAHDSYAF 168          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.049e-37
Identity = 67/105 (63.81%), Postives = 82/105 (78.10%), Query Frame = 2
Query:  296 QQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPL 610
            Q++ D +  LPGQ  +V+F  Y GYVTVNE +GR+L+Y+FVEA +   S PLVLWLNGGPGCSS+ YG  +E+GPF I  DGKTLY NPYSWN VANILFL+SP+
Sbjct:   74 QKERDLIENLPGQP-SVSFRQYGGYVTVNESAGRSLYYYFVEATKTKKSLPLVLWLNGGPGCSSL-YGAFQELGPFRIYGDGKTLYTNPYSWNNVANILFLESPV 176          

HSP 2 Score: 37.7354 bits (86), Expect = 2.049e-37
Identity = 19/42 (45.24%), Postives = 25/42 (59.52%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKFY*SVRTVSHFKE 729
            PVG GFSY+NT SD+   GD + A D  K+   V+ +  F E
Sbjct:  175 PVGTGFSYTNTESDLENPGDMKAAAD--KYIFLVKWLERFPE 214          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.672e-37
Identity = 62/105 (59.05%), Postives = 80/105 (76.19%), Query Frame = 2
Query:  308 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPLVLVF 622
            D V  LPGQ  +V+F HY+GYV V+E +GRA+FYWF EA++ P  KPLVLWLNGGPGCSS+ YG  +EIGPF +  +G  L  NPY+WN+ AN+LFL+SP+ + F
Sbjct:   49 DLVTGLPGQP-DVSFRHYAGYVPVDESNGRAMFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTNGNGLNFNPYAWNKEANMLFLESPVGVGF 152          

HSP 2 Score: 41.2022 bits (95), Expect = 2.672e-37
Identity = 20/30 (66.67%), Postives = 21/30 (70.00%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            PVGVGFSYSNTSSD    GD  TA D+  F
Sbjct:  147 PVGVGFSYSNTSSDYQKLGDDFTARDAYTF 176          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP53_ARATH (Putative serine carboxypeptidase-like 53 OS=Arabidopsis thaliana GN=SCPL53 PE=5 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.693e-37
Identity = 65/104 (62.50%), Postives = 80/104 (76.92%), Query Frame = 2
Query:  296 QQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            Q++ D +  LPGQ  +VNF  Y GYVTVNE +GR+L+Y+FVEA    +S PLVLWLNGGPGCSS+ YG  +E+GPF +  D KTLY NPYSWN VAN+LFL+SP
Sbjct:   74 QKERDLIENLPGQP-SVNFKQYGGYVTVNESAGRSLYYYFVEATNTKNSSPLVLWLNGGPGCSSL-YGAFQELGPFRVHSDNKTLYTNPYSWNNVANMLFLESP 175          

HSP 2 Score: 37.7354 bits (86), Expect = 2.693e-37
Identity = 18/42 (42.86%), Postives = 26/42 (61.90%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKFY*SVRTVSHFKE 729
            P G GFSY+NT++D+   GD +TA D+  F   V+ +  F E
Sbjct:  175 PAGTGFSYTNTTTDMENPGDMKTAADNYVFL--VKWLERFPE 214          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP33_ARATH (Serine carboxypeptidase-like 33 OS=Arabidopsis thaliana GN=SCPL33 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.378e-36
Identity = 64/130 (49.23%), Postives = 86/130 (66.15%), Query Frame = 2
Query:  236 ILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAV-EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPLVLVF 622
            +L I ++  L        +  Q  D+V  LP Q  N   +H+SGYV VN+E+ R+LF+WF EA+ E P ++PLVLWLNGGPGCSSI YG A E+GPF +  +G +L  N YSW Q AN+LFL+SP+ + F
Sbjct:    7 LLIISLLILLSLLHQDYHIEAQNSDKVVNLPEQPLNPKISHFSGYVNVNQENTRSLFFWFFEALSESPSTRPLVLWLNGGPGCSSIGYGAASELGPFRVVENGTSLSFNQYSWVQEANMLFLESPVGVGF 136          

HSP 2 Score: 38.1206 bits (87), Expect = 6.378e-36
Identity = 17/30 (56.67%), Postives = 21/30 (70.00%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            PVGVGFSY+N+SSD+    D   AED+  F
Sbjct:  131 PVGVGFSYTNSSSDLENLNDAFVAEDAYNF 160          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: HNLS_SORBI (P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicolor PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 6.877e-35
Identity = 62/110 (56.36%), Postives = 80/110 (72.73%), Query Frame = 2
Query:  296 QQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEA-VEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPLVLVF 622
            QQ+ DR+  LPGQ   V F  Y GYVT+++ +GRAL+YWF EA   DP + PLVLWLNGGPGCSSI  G  +E+GPF +  +G++L LN Y+WN+ ANILF +SP  +VF
Sbjct:   59 QQEDDRIPGLPGQPNGVAFGMYGGYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGPFRVHTNGESLLLNEYAWNKAANILFAESPAGVVF 168          

HSP 2 Score: 35.039 bits (79), Expect = 6.877e-35
Identity = 17/30 (56.67%), Postives = 22/30 (73.33%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            P GV FSYSNTSSD++  GD + A+D+  F
Sbjct:  163 PAGVVFSYSNTSSDLSM-GDDKMAQDTYTF 191          
The following BLAST results are available for this feature:
BLAST of FC920307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
SCP32_ARATH5.056e-3956.10Serine carboxypeptidase-like 32 OS=Arabidopsis tha... [more]
CBP2_WHEAT6.590e-3963.00Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
CBP23_HORVU4.190e-3860.38Serine carboxypeptidase II-3 OS=Hordeum vulgare GN... [more]
SCP40_ARATH5.461e-3860.19Serine carboxypeptidase-like 40 OS=Arabidopsis tha... [more]
CBP2_HORVU9.274e-3861.00Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]
SCP39_ARATH2.049e-3763.81Serine carboxypeptidase-like 39 OS=Arabidopsis tha... [more]
SCP31_ARATH2.672e-3759.05Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]
SCP53_ARATH2.693e-3762.50Putative serine carboxypeptidase-like 53 OS=Arabid... [more]
SCP33_ARATH6.378e-3649.23Serine carboxypeptidase-like 33 OS=Arabidopsis tha... [more]
HNLS_SORBI6.877e-3556.36P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicol... [more]

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Properties
Property NameValue
Genbank descriptionC32006F07EF RVDevelop1 Citrus clementina cDNA clone C32006F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920307 ID=FC920307; Name=FC920307; organism=Citrus clementina; type=EST; length=734bp
GGACATCATTCAAATCATTCATCGAACCCACTATTCTGGACAGAGAAATC
AAAAGGGCTTAAGTTCTGTTCAGCAGATAAACTGAACAAAGAAAAAAAAA
AAATTCCTCAGAACACTATCATTGGCTCCAACGTTTTTGCTTGATTATGT
CTTCTTTATAAGTCGCAGTACCCCAGTACACTAAACCATATAAAAAATGG
CTTATAATCCAAAAGGGGCTTCCTTTCTTGTTCAAATCTTGTTCATTTGC
ATAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGTTGCCCAGCA
AAAACTTGACAGAGTTGGGAAGCTACCTGGGCAAAATTTCAATGTCAACT
TTGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCCGGGAGGGCT
CTCTTTTATTGGTTCGTTGAAGCTGTTGAAGATCCTGATTCCAAGCCTCT
TGTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTGCTTATGGAG
AGGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGGGAAGACCTTA
TACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCTGTTTCTTGA
TTCCCCGTTGGTGTTGGTTTTTCATATTCAAATACATCCTCTGATATTAC
GACCAATGGCGATAAAAGGACTGCGGAGGATTCCCTAAAATTTTACTAAA
GTGTTAGAACGGTTTCACATTTTAAGGAGGGATT
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