FC920307

Overview
NameFC920307
Unique NameFC920307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11134 contig Ccv1_Contig11134:67..801. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP30_ARATH (Putative serine carboxypeptidase-like 30 OS=Arabidopsis thaliana GN=SCPL30 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 1.520e-34
Identity = 61/108 (56.48%), Postives = 80/108 (74.07%), Query Frame = 2
Query:  299 QKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPLVLVF 622
            ++ D V  LPGQ  +V+F HY+GYV V++ +GRALFYWF EA++ P  KPLVLWLNGGPGCSS+ YG  +EIGPF    + K L  NPY+WN+  N+LFL+SP+ + F
Sbjct:   40 KEADLVTNLPGQP-DVSFKHYAGYVPVDKSNGRALFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPFLADTNEKGLIFNPYAWNKEVNMLFLESPVGVGF 146          

HSP 2 Score: 35.4242 bits (80), Expect = 1.520e-34
Identity = 17/30 (56.67%), Postives = 19/30 (63.33%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            PVGVGFSYSNTSSD     D    +D+  F
Sbjct:  141 PVGVGFSYSNTSSDYLNLDDHFAKKDAYTF 170          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP43_ARATH (Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana GN=SCPL43 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.785e-33
Identity = 57/100 (57.00%), Postives = 77/100 (77.00%), Query Frame = 2
Query:  308 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            D V +LPGQ  NV F  ++GYV V+ E+GR+LFY++VEAV++PD+KPL LWLNGGPGCSS+  G   E+GPF+   DG+ L LN  SWN+ +N+LF++SP
Sbjct:   30 DLVARLPGQP-NVGFRQFAGYVDVDSENGRSLFYYYVEAVKEPDTKPLTLWLNGGPGCSSVGGGAFTELGPFYPTGDGRGLRLNSMSWNKASNLLFVESP 128          

HSP 2 Score: 36.965 bits (84), Expect = 2.785e-33
Identity = 19/30 (63.33%), Postives = 20/30 (66.67%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            P GVG+SYSN SSD  T GDK T  D L F
Sbjct:  128 PAGVGWSYSNRSSDYNT-GDKSTVNDMLVF 156          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.146e-33
Identity = 59/106 (55.66%), Postives = 77/106 (72.64%), Query Frame = 2
Query:  308 DRVGKLPGQNFNVNFAHYSGYVTVN-EESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPLVLVF 622
            D V  LPGQ   VNF HY+GYV +  E+  +ALFYWF EA ++   +PLVLWLNGGPGCSSIAYG A+E+GPF +  +G  L  N +SWN+ AN+LFL++P+ + F
Sbjct:   38 DLVTGLPGQP-PVNFKHYAGYVNLGPEQKQKALFYWFFEAQQNSSRRPLVLWLNGGPGCSSIAYGAAQELGPFLVHDNGGKLTYNHFSWNKEANMLFLEAPVGVGF 142          

HSP 2 Score: 41.2022 bits (95), Expect = 6.146e-33
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            PVGVGFSY+N S D+   GD+ TA DSL F
Sbjct:  137 PVGVGFSYTNNSMDLQKLGDEVTASDSLAF 166          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP42_ARATH (Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana GN=SCPL42 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.624e-32
Identity = 56/100 (56.00%), Postives = 75/100 (75.00%), Query Frame = 2
Query:  308 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            D V +LPGQ   V F  Y+GYV V+ ++GR+LFY++VEAV+ PDSKPL LWLNGGPGCSSI  G   E+GPF+   DG+ L +N  SWN+ +++LF++SP
Sbjct:   31 DLVVRLPGQP-TVGFKQYAGYVDVDVKAGRSLFYYYVEAVKQPDSKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDGRGLRVNSMSWNKASHLLFVESP 129          

HSP 2 Score: 38.5058 bits (88), Expect = 8.624e-32
Identity = 20/30 (66.67%), Postives = 21/30 (70.00%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            P GVG+SYSN SSD  T GDK TA D L F
Sbjct:  129 PAGVGWSYSNKSSDYNT-GDKSTANDMLVF 157          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP44_ARATH (Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana GN=SCPL44 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.123e-31
Identity = 56/100 (56.00%), Postives = 72/100 (72.00%), Query Frame = 2
Query:  308 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            D V KLPGQ   V F  ++GYV ++ ++GR+LFY+FVEA + P SKPL LWLNGGPGCSSI  G   E+GPF+   D + L  NP SWN+ +N+LF+DSP
Sbjct:   36 DLVTKLPGQP-EVAFRQFAGYVDIDVKAGRSLFYYFVEAEKQPHSKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDARGLRRNPKSWNKASNLLFVDSP 134          

HSP 2 Score: 40.4318 bits (93), Expect = 1.123e-31
Identity = 20/30 (66.67%), Postives = 24/30 (80.00%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            P GVG+SYSNT+SD TT GD+ TA+D L F
Sbjct:  134 PAGVGWSYSNTTSDYTT-GDESTAKDMLVF 162          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP38_ARATH (Serine carboxypeptidase-like 38 OS=Arabidopsis thaliana GN=SCPL38 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.086e-31
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 2
Query:  260 YLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPLVLVFHIQIHP 640
            +  S    + ++ ++ D + KLPGQ   ++F  Y GYV VNE + R L+Y+FVEA++   S PLVLW NGGPGCSS+ +G  EE+GPF +  DGKTLY NPYSWN  AN+LF + P+ + F     P
Sbjct:   46 HFNSVSRENVLSLKEKDLIEKLPGQPSGISFRQYGGYVAVNEPATRFLYYYFVEAIKPSKSTPLVLWFNGGPGCSSVGFGAFEELGPFRVHSDGKTLYRNPYSWNNEANMLFFEGPISVGFSYSSTP 172          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP45_ARATH (Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.207e-31
Identity = 65/129 (50.39%), Postives = 83/129 (64.34%), Query Frame = 2
Query:  236 ILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPLVLVF 622
            I F  IIF+   + +         DRV +LPGQ   V F  YSGYVTV+++  RALFY+F EA  +P SKPLVLWLNGGPGCSS+  G   E GPF  +P G  L  N +SWNQ AN+L+L++P+ + F
Sbjct:    9 ISFALIIFH---SLTVSSSVLSHSDRVTRLPGQP-RVGFQQYSGYVTVDDKKQRALFYYFAEAETNPSSKPLVLWLNGGPGCSSLGVGAFSENGPF--RPKGPILVKNQHSWNQEANMLYLETPVGVGF 131          

HSP 2 Score: 35.039 bits (79), Expect = 4.207e-31
Identity = 18/30 (60.00%), Postives = 19/30 (63.33%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            PVGVGFSYS  SS      DK TA D+L F
Sbjct:  126 PVGVGFSYSTQSSHYEGVNDKITARDNLVF 155          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP46_ARATH (Serine carboxypeptidase-like 46 OS=Arabidopsis thaliana GN=SCPL46 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.575e-30
Identity = 58/107 (54.21%), Postives = 74/107 (69.16%), Query Frame = 2
Query:  302 KLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPLVLVF 622
            + DR+ +LPGQ   V F  YSGYVT++E+  RALFY+  EA   P SKPLVLWLNGGPGCSS+  G   E GPF  +P G  L  N +SWNQ AN+L+L++P+ + F
Sbjct:   30 RADRITRLPGQP-RVGFQQYSGYVTIDEKKQRALFYYLAEAETKPISKPLVLWLNGGPGCSSLGVGAFSENGPF--RPKGSILVRNQHSWNQEANMLYLETPVGVGF 133          

HSP 2 Score: 36.965 bits (84), Expect = 1.575e-30
Identity = 18/30 (60.00%), Postives = 21/30 (70.00%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            PVGVGFSY+N SS      DK TA+D+L F
Sbjct:  128 PVGVGFSYANESSSYEGVNDKITAKDNLVF 157          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP41_ARATH (Serine carboxypeptidase-like 41 OS=Arabidopsis thaliana GN=SCPL41 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.337e-29
Identity = 54/100 (54.00%), Postives = 72/100 (72.00%), Query Frame = 2
Query:  308 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            D V +LPGQ   V F  Y+GYV ++  +GR+LFY+FVEA + PD+KPL LWLNGGPGCSS+  G   E+GPF+    G+ L +N  SWN+ +N+LF+DSP
Sbjct:   27 DLVVRLPGQP-KVVFRQYAGYVDLDLNAGRSLFYYFVEAEKHPDTKPLTLWLNGGPGCSSVGGGAFTELGPFYPTGYGRGLRINSMSWNKASNLLFVDSP 125          

HSP 2 Score: 34.6538 bits (78), Expect = 6.337e-29
Identity = 18/30 (60.00%), Postives = 19/30 (63.33%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            P GVG+SYSN SSD    GDK  A D L F
Sbjct:  125 PAGVGWSYSNRSSDYNA-GDKSAASDMLVF 153          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP37_ARATH (Serine carboxypeptidase-like 37 OS=Arabidopsis thaliana GN=SCPL37 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.266e-28
Identity = 60/127 (47.24%), Postives = 82/127 (64.57%), Query Frame = 2
Query:  290 VAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPLVLVFHIQIHPLILRPMAIKG 670
            ++ ++ D + KLPGQ   V+F  Y GYV VNE S R L+Y+FVEA++   S PLV+W NGGP CSS+  G   E+GPF +   G+ L+ NPYSWN  AN+LFL+SP+   F    +P+ L  +  KG
Sbjct:   57 LSPKEKDLIKKLPGQPSGVSFRQYGGYVPVNEPSSRFLYYYFVEAIKPNTSTPLVIWFNGGPACSSLG-GAFLELGPFRVHSGGRKLFRNPYSWNNEANVLFLESPVTTGFSYSSNPIDLEELGEKG 182          
The following BLAST results are available for this feature:
BLAST of FC920307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
SCP30_ARATH1.520e-3456.48Putative serine carboxypeptidase-like 30 OS=Arabid... [more]
SCP43_ARATH2.785e-3357.00Serine carboxypeptidase-like 43 OS=Arabidopsis tha... [more]
SCP35_ARATH6.146e-3355.66Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
SCP42_ARATH8.624e-3256.00Serine carboxypeptidase-like 42 OS=Arabidopsis tha... [more]
SCP44_ARATH1.123e-3156.00Serine carboxypeptidase-like 44 OS=Arabidopsis tha... [more]
SCP38_ARATH2.086e-3148.03Serine carboxypeptidase-like 38 OS=Arabidopsis tha... [more]
SCP45_ARATH4.207e-3150.39Serine carboxypeptidase-like 45 OS=Arabidopsis tha... [more]
SCP46_ARATH1.575e-3054.21Serine carboxypeptidase-like 46 OS=Arabidopsis tha... [more]
SCP41_ARATH6.337e-2954.00Serine carboxypeptidase-like 41 OS=Arabidopsis tha... [more]
SCP37_ARATH1.266e-2847.24Serine carboxypeptidase-like 37 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC32006F07EF RVDevelop1 Citrus clementina cDNA clone C32006F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920307 ID=FC920307; Name=FC920307; organism=Citrus clementina; type=EST; length=734bp
GGACATCATTCAAATCATTCATCGAACCCACTATTCTGGACAGAGAAATC
AAAAGGGCTTAAGTTCTGTTCAGCAGATAAACTGAACAAAGAAAAAAAAA
AAATTCCTCAGAACACTATCATTGGCTCCAACGTTTTTGCTTGATTATGT
CTTCTTTATAAGTCGCAGTACCCCAGTACACTAAACCATATAAAAAATGG
CTTATAATCCAAAAGGGGCTTCCTTTCTTGTTCAAATCTTGTTCATTTGC
ATAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGTTGCCCAGCA
AAAACTTGACAGAGTTGGGAAGCTACCTGGGCAAAATTTCAATGTCAACT
TTGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCCGGGAGGGCT
CTCTTTTATTGGTTCGTTGAAGCTGTTGAAGATCCTGATTCCAAGCCTCT
TGTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTGCTTATGGAG
AGGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGGGAAGACCTTA
TACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCTGTTTCTTGA
TTCCCCGTTGGTGTTGGTTTTTCATATTCAAATACATCCTCTGATATTAC
GACCAATGGCGATAAAAGGACTGCGGAGGATTCCCTAAAATTTTACTAAA
GTGTTAGAACGGTTTCACATTTTAAGGAGGGATT
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