FC920307

Overview
NameFC920307
Unique NameFC920307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11134 contig Ccv1_Contig11134:67..801. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP36_ARATH (Serine carboxypeptidase-like 36 OS=Arabidopsis thaliana GN=SCPL36 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.819e-28
Identity = 56/112 (50.00%), Postives = 78/112 (69.64%), Query Frame = 2
Query:  308 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPLVLVFHIQIHPL 643
            D + +LPGQ  +V F  Y GYV VN+ +GR L+Y+FVE ++  ++ PLV+W NGGPGCSS+  G  +E+GPF +  DGKTL+ NPYSWN  AN+LFL++P+   F     P+
Sbjct:   62 DLIQQLPGQPSDVTFKQYGGYVAVNKPAGRFLYYYFVETIKPGNTTPLVIWFNGGPGCSSLG-GAFKELGPFRVHSDGKTLFRNPYSWNNEANVLFLETPVGTGFSYSNSPI 172          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: NF314_NAEFO (Virulence-related protein Nf314 OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 4.015e-28
Identity = 51/103 (49.51%), Postives = 70/103 (67.96%), Query Frame = 2
Query:  314 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPLVLVF 622
            V +LPG + N+    Y+GY+  N   GR LFYWF E++ +P   PLV+W NGGPGCSS+  GEA E G F +  DG T+  NPYSWN+V+NIL+++ P+ + F
Sbjct:   16 VTQLPGLSGNIGVKSYTGYLLANATRGRYLFYWFFESMRNPSQDPLVMWTNGGPGCSSLG-GEASEHGLFLVNADGATITRNPYSWNRVSNILYIEQPVGVGF 117          

HSP 2 Score: 32.3426 bits (72), Expect = 4.015e-28
Identity = 14/26 (53.85%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAED 681
            PVGVGFSYSN++ D     D + A D
Sbjct:  112 PVGVGFSYSNSTDDYQNLNDVQAASD 137          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.500e-27
Identity = 52/108 (48.15%), Postives = 75/108 (69.44%), Query Frame = 2
Query:  314 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKT-----LYLNPYSWNQVANILFLDSPLVLVF 622
            + KLPG        HYSGYVT+++E G+ L+Y+F+E+ ++P   P+VLWLNGGPGCSS+  G   E GPF+ +   K      L+LNPYSW++V+NI++LDSP+ + F
Sbjct:   35 ITKLPGFEGTFPSKHYSGYVTIDKEHGKNLWYYFIESEKNPSKDPVVLWLNGGPGCSSMD-GFVYEHGPFNFELPKKNNSLPLLHLNPYSWSKVSNIIYLDSPVGVGF 141          

HSP 2 Score: 37.3502 bits (85), Expect = 1.500e-27
Identity = 20/30 (66.67%), Postives = 21/30 (70.00%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            PVGVGFSYSN  SD  T GD +TA DS  F
Sbjct:  136 PVGVGFSYSNNKSDYIT-GDIKTAVDSHAF 164          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: YPP3_CAEEL (Uncharacterized serine carboxypeptidase F32A5.3 OS=Caenorhabditis elegans GN=F32A5.3 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.017e-25
Identity = 56/117 (47.86%), Postives = 74/117 (63.25%), Query Frame = 2
Query:  263 LGSAFSTDPVAQQ-KLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPL 610
            LG AF    V  Q + D +  LPG  F  NF  YSGYV  N      + Y   E+  +PD+ PL++W NGGPGCSS+  G  EE+GPF++  DG+TLY NPY+WN  AN+L+L+SP+
Sbjct:    6 LGVAFLVVTVLSQGEKDLIQNLPGLLFKANFKSYSGYVDANANGTWKMHYMLTESRSNPDTDPLLVWFNGGPGCSSLG-GLFEELGPFYVNFDGQTLYENPYAWNAKANVLYLESPI 121          

HSP 2 Score: 23.483 bits (49), Expect = 1.017e-25
Identity = 9/24 (37.50%), Postives = 14/24 (58.33%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTA 675
            P+GVG+SY  T+       D ++A
Sbjct:  120 PIGVGYSYDTTTPGYFQANDDQSA 143          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: CBP1_ORYSJ (Serine carboxypeptidase 1 OS=Oryza sativa subsp. japonica GN=CBP1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.019e-25
Identity = 52/103 (50.49%), Postives = 69/103 (66.99%), Query Frame = 2
Query:  314 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKT-----LYLNPYSWNQVANILFLDSP 607
            V  +PG +  +   HY+GYVTV E+ GR LFY+ VE+  DP   PLVLWLNGGPGCSS   G   E GPF+ +  G       L+LNPYSW++V+++++LDSP
Sbjct:   43 VKSVPGFDGALPSKHYAGYVTVEEQHGRNLFYYLVESERDPAKDPLVLWLNGGPGCSSFD-GFVYEHGPFNFESGGSAKSLPKLHLNPYSWSKVSSVIYLDSP 144          

HSP 2 Score: 32.7278 bits (73), Expect = 1.019e-25
Identity = 17/30 (56.67%), Postives = 19/30 (63.33%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            P GVG SYS  +SD  T GD +TA DS  F
Sbjct:  144 PAGVGLSYSKNTSDYNT-GDLKTAADSHTF 172          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: YSS2_CAEEL (Uncharacterized serine carboxypeptidase K10B2.2 OS=Caenorhabditis elegans GN=K10B2.2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.020e-25
Identity = 58/126 (46.03%), Postives = 78/126 (61.90%), Query Frame = 2
Query:  230 VQILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            +++L I  IF    +F    +A    D+V  LPG  F  +F HYSGY+    +  + L YW  E+   P   PLVLWLNGGPGCSS+  G  EE+GPFH+K  G ++Y N Y+WN+ AN+LFL+SP
Sbjct:    1 MKLLSILFIFVSSYSFC---LAAPATDKVNDLPGLTFTPDFFHYSGYLRAWTD--KYLHYWLTESSRAPTQDPLVLWLNGGPGCSSLD-GLIEELGPFHVKDFGNSIYYNEYAWNKFANVLFLESP 120          

HSP 2 Score: 23.0978 bits (48), Expect = 1.020e-25
Identity = 10/21 (47.62%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDK 666
            P GVG+SYS T+ ++T + D+
Sbjct:  120 PAGVGYSYS-TNFNLTVSDDE 139          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.326e-25
Identity = 49/106 (46.23%), Postives = 71/106 (66.98%), Query Frame = 2
Query:  314 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKT---LYLNPYSWNQVANILFLDSPLVLVF 622
            +  LPG N      HY+GYV +++   + L+Y+FVE+  +    P+VLWLNGGPGCSS+  G   E GPF+ +P  K    L+LNPYSW++V+NI++LDSP+ + F
Sbjct:   30 ITNLPGFNGTFPSKHYAGYVAIDKHRNKNLWYYFVESERNASVDPVVLWLNGGPGCSSMD-GFVYEHGPFNFEPKKKNSHLLHLNPYSWSKVSNIIYLDSPVGVGF 134          

HSP 2 Score: 36.965 bits (84), Expect = 1.326e-25
Identity = 18/30 (60.00%), Postives = 23/30 (76.67%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            PVGVGFSYSN ++D TT+ D +TA D+  F
Sbjct:  129 PVGVGFSYSNDNADYTTD-DTKTASDTHTF 157          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: PPGB_HUMAN (Lysosomal protective protein OS=Homo sapiens GN=CTSA PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 1.422e-24
Identity = 56/128 (43.75%), Postives = 82/128 (64.06%), Query Frame = 2
Query:  224 FLVQILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            FL+ +L + ++     ++++   A    D + +LPG     +F  YSGY+       + L YWFVE+ +DP++ P+VLWLNGGPGCSS+  G   E GPF ++PDG TL  NPYSWN +AN+L+L+SP
Sbjct:   10 FLLLLLLLLLV-----SWASRGEAAPDQDEIQRLPGLAKQPSFRQYSGYL--KGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLD-GLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESP 129          

HSP 2 Score: 21.9422 bits (45), Expect = 1.422e-24
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 1
Query:  604 PVGVGFSYSN 633
            P GVGFSYS+
Sbjct:  129 PAGVGFSYSD 138          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: PPGB_BOVIN (Lysosomal protective protein OS=Bos taurus GN=CTSA PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.422e-24
Identity = 54/100 (54.00%), Postives = 67/100 (67.00%), Query Frame = 2
Query:  308 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            D +  LPG     +F  YSGY+       + L YWFVE+ +DP S P+VLWLNGGPGCSS+  G   E GPF I+PDG TL  NPYSWN +AN+L+L+SP
Sbjct:   32 DEIRFLPGLAKQPSFRQYSGYL--KGSGSKRLHYWFVESQKDPKSSPVVLWLNGGPGCSSLD-GLLTEHGPFLIQPDGVTLEYNPYSWNLIANVLYLESP 128          

HSP 2 Score: 23.8682 bits (50), Expect = 1.422e-24
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTN 657
            P GVGFSYS+  S  T +
Sbjct:  128 PAGVGFSYSDDKSYATND 145          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 101.679 bits (252), Expect = 3.131e-24
Identity = 55/124 (44.35%), Postives = 75/124 (60.48%), Query Frame = 2
Query:  251 IIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKT-----LYLNPYSWNQVANILFLDSP 607
            ++  L  A S    A  +   V  LPG +  +   HY+GYVTV+E  GR LFY+ VE+  DP   P+VLWLNGGPGCSS   G   E GPF+ +  G       L+LNPY+W++V+ +++LDSP
Sbjct:   16 LLLLLALALSGGGGAAPQGAEVTGLPGFDGALPSKHYAGYVTVDEGHGRNLFYYVVESERDPGKDPVVLWLNGGPGCSSFD-GFVYEHGPFNFESGGSVKSLPKLHLNPYAWSKVSTMIYLDSP 138          

HSP 2 Score: 31.187 bits (69), Expect = 3.131e-24
Identity = 17/30 (56.67%), Postives = 18/30 (60.00%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            P GVG SYS   SD  T GD +TA DS  F
Sbjct:  138 PAGVGLSYSKNVSDYET-GDLKTATDSHTF 166          
The following BLAST results are available for this feature:
BLAST of FC920307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
SCP36_ARATH2.819e-2850.00Serine carboxypeptidase-like 36 OS=Arabidopsis tha... [more]
NF314_NAEFO4.015e-2849.51Virulence-related protein Nf314 OS=Naegleria fowle... [more]
SCP20_ARATH1.500e-2748.15Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
YPP3_CAEEL1.017e-2547.86Uncharacterized serine carboxypeptidase F32A5.3 OS... [more]
CBP1_ORYSJ1.019e-2550.49Serine carboxypeptidase 1 OS=Oryza sativa subsp. j... [more]
YSS2_CAEEL1.020e-2546.03Uncharacterized serine carboxypeptidase K10B2.2 OS... [more]
SCP21_ARATH1.326e-2546.23Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
PPGB_HUMAN1.422e-2443.75Lysosomal protective protein OS=Homo sapiens GN=CT... [more]
PPGB_BOVIN1.422e-2454.00Lysosomal protective protein OS=Bos taurus GN=CTSA... [more]
CBP1_HORVU3.131e-2444.35Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]

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Properties
Property NameValue
Genbank descriptionC32006F07EF RVDevelop1 Citrus clementina cDNA clone C32006F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920307 ID=FC920307; Name=FC920307; organism=Citrus clementina; type=EST; length=734bp
GGACATCATTCAAATCATTCATCGAACCCACTATTCTGGACAGAGAAATC
AAAAGGGCTTAAGTTCTGTTCAGCAGATAAACTGAACAAAGAAAAAAAAA
AAATTCCTCAGAACACTATCATTGGCTCCAACGTTTTTGCTTGATTATGT
CTTCTTTATAAGTCGCAGTACCCCAGTACACTAAACCATATAAAAAATGG
CTTATAATCCAAAAGGGGCTTCCTTTCTTGTTCAAATCTTGTTCATTTGC
ATAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGTTGCCCAGCA
AAAACTTGACAGAGTTGGGAAGCTACCTGGGCAAAATTTCAATGTCAACT
TTGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCCGGGAGGGCT
CTCTTTTATTGGTTCGTTGAAGCTGTTGAAGATCCTGATTCCAAGCCTCT
TGTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTGCTTATGGAG
AGGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGGGAAGACCTTA
TACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCTGTTTCTTGA
TTCCCCGTTGGTGTTGGTTTTTCATATTCAAATACATCCTCTGATATTAC
GACCAATGGCGATAAAAGGACTGCGGAGGATTCCCTAAAATTTTACTAAA
GTGTTAGAACGGTTTCACATTTTAAGGAGGGATT
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