FC920307

Overview
NameFC920307
Unique NameFC920307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11134 contig Ccv1_Contig11134:67..801. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP16_ARATH (Serine carboxypeptidase-like 16 OS=Arabidopsis thaliana GN=SCPL16 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.229e-15
Identity = 47/125 (37.60%), Postives = 67/125 (53.60%), Query Frame = 2
Query:  323 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDG-----KTLYLNPYSWNQVANILFLDSPLVLVFHIQIHPLILRPMAIKGLRRI 682
            LPG    + F   +GY+ V EE    +FY+F+++  +P + PL+LWL+GGPGCSS   G   E GP   K +       TL    YSW +VANI++LD P+   F    +PL   P      +R+
Sbjct:   30 LPGFEGPLPFELETGYIGVGEEDEDQMFYYFIKSESNPKTDPLLLWLSGGPGCSSFT-GLIYENGPLGFKVEAYNGSIPTLVSTTYSWTKVANIIYLDQPVGTGFSYSRNPLADIPSDTGSAKRV 153          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: YBY9_YEAST (Putative serine carboxypeptidase YBR139W OS=Saccharomyces cerevisiae GN=YBR139W PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.475e-15
Identity = 41/88 (46.59%), Postives = 57/88 (64.77%), Query Frame = 2
Query:  359 YSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPLVLVF 622
            +SGY+   +   +  FYWF E+  DP + P++LWLNGGPGCSS   G   E+GP  I  D K ++ NPYSWN  A+++FL+ PL + F
Sbjct:   94 WSGYMDYKDS--KHFFYWFFESRNDPANDPIILWLNGGPGCSSFT-GLLFELGPSSIGADMKPIH-NPYSWNNNASMIFLEQPLGVGF 177          

HSP 2 Score: 20.7866 bits (42), Expect = 1.475e-15
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 1
Query:  604 PVGVGFSYSN 633
            P+GVGFSY +
Sbjct:  172 PLGVGFSYGD 181          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP11_ARATH (Serine carboxypeptidase-like 11 OS=Arabidopsis thaliana GN=SCPL11 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.605e-15
Identity = 48/125 (38.40%), Postives = 68/125 (54.40%), Query Frame = 2
Query:  323 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPD-----GKTLYLNPYSWNQVANILFLDSPLVLVFHIQIHPLILRPMAIKGLRRI 682
            LPG    + F   +GY+ + EE    LFY+F+++  +P   PL+LWL+GGPGCSSI  G   + GP  +K +       +L    YSW + ANI+FLD P+   F     PLI  P     ++RI
Sbjct:   28 LPGFEGPLPFELETGYIGIGEEEEVQLFYYFIKSERNPKEDPLLLWLSGGPGCSSIT-GLLFQNGPLALKSEVYNGSVPSLVSTTYSWTKTANIIFLDQPVGAGFSYSRAPLIDTPTDTGEVKRI 151          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP14_ARATH (Serine carboxypeptidase-like 14 OS=Arabidopsis thaliana GN=SCPL14 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.096e-15
Identity = 44/116 (37.93%), Postives = 64/116 (55.17%), Query Frame = 2
Query:  323 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDG-----KTLYLNPYSWNQVANILFLDSPLVLVFHIQIHPLILRP 655
            LPG    + F   +GY+ V +E    +FY+F+++  +P+  PL++WL+GGPGCSS   G   E GP   K +       TL    YSW +VANI++LD P+   F    +P   RP
Sbjct:   30 LPGFEGPLPFELETGYIGVGDEDEDQMFYYFIKSESNPEEDPLLVWLSGGPGCSSFT-GLVYENGPLGFKVEAYNGSIPTLVSTTYSWTKVANIIYLDQPVGAGFSYSRNPFADRP 144          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: VCP_AEDAE (Vitellogenic carboxypeptidase OS=Aedes aegypti GN=VCP PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 2.496e-15
Identity = 34/84 (40.48%), Postives = 58/84 (69.05%), Query Frame = 2
Query:  359 YSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPL 610
            YSG++TV+ +    LF+W+V A  + +  P+++WL GGPG SS+ +G  EE GPFHI  + K++    YSW+Q  +++++D+P+
Sbjct:   77 YSGFMTVDAKHNSNLFFWYVPAKNNREQAPILVWLQGGPGASSL-FGMFEENGPFHIHRN-KSVKQREYSWHQNHHMIYIDNPV 158          

HSP 2 Score: 26.5646 bits (57), Expect = 2.496e-15
Identity = 11/30 (36.67%), Postives = 20/30 (66.67%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            PVG GFS++++    +TN ++   E+ +KF
Sbjct:  157 PVGTGFSFTDSDEGYSTN-EEHVGENLMKF 185          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP8_ARATH (Serine carboxypeptidase-like 8 OS=Arabidopsis thaliana GN=SCPL8 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.501e-15
Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = 2
Query:  323 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIK-----PDGKTLYLNPYSWNQVANILFLDSPL 610
            LPG    + F   +GY+ + E+     FY+F+++  +P   PL++WLNGGPGCS +  G   E GP  +K         +L+   YSW ++ANI+FLD P+
Sbjct:   26 LPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLG-GIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPV 125          

HSP 2 Score: 25.409 bits (54), Expect = 2.501e-15
Identity = 17/29 (58.62%), Postives = 17/29 (58.62%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGD----KRTAE 678
            PVG GFSYS T  D T  GD    KRT E
Sbjct:  124 PVGSGFSYSKTPIDKT--GDISEVKRTHE 150          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP12_ARATH (Serine carboxypeptidase-like 12 OS=Arabidopsis thaliana GN=SCPL12 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.737e-15
Identity = 47/116 (40.52%), Postives = 63/116 (54.31%), Query Frame = 2
Query:  323 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKP-----DGKTLYLNPYSWNQVANILFLDSPLVLVFHIQIHPLILRP 655
            LPG    + F   +GY+ + EE    LFY+F+++  +P   PL+LWL+GGPGCSSI  G   E GP  +K         +L    YSW + ANI+FLD P+   F     PLI  P
Sbjct:   28 LPGFEGPLPFELETGYIGIGEEEDVQLFYYFIKSERNPKEDPLLLWLSGGPGCSSIT-GLLFENGPLALKSKVYNGSVPSLVSTTYSWTKTANIIFLDQPIGAGFSYSRIPLIDTP 142          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP7_ARATH (Serine carboxypeptidase-like 7 OS=Arabidopsis thaliana GN=SCPL7 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.669e-15
Identity = 47/128 (36.72%), Postives = 72/128 (56.25%), Query Frame = 2
Query:  314 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDG-----KTLYLNPYSWNQVANILFLDSPLVLVFHIQIHPLILRPMAIKGLRRI 682
            V  LPG +  + F   +GY+ V EE    LFY+F+++  +P   PL+LWL+GGPGCSSI+ G   E GP ++K +       +L    YSW +V++I++LD P+   F      L+ +P      +RI
Sbjct:   29 VKSLPGFDGPLPFELETGYIGVGEEEEVQLFYYFIKSERNPQEDPLLLWLSGGPGCSSIS-GLLYENGPVNVKIEVYNGTLPSLVSTTYSWTKVSSIIYLDQPVGTGFSYSRTKLVNKPSDSGEAKRI 155          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP1_ARATH (Serine carboxypeptidase-like 1 OS=Arabidopsis thaliana GN=SCPL1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.485e-15
Identity = 42/104 (40.38%), Postives = 60/104 (57.69%), Query Frame = 2
Query:  314 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDG-----KTLYLNPYSWNQVANILFLDSPL 610
            V  LPG    + F   +GY+ V EE    LFY+F+++  +P   PL+LWL GGPGCS+I+ G   E GP  +K D       +L    YSW + ++I+FLD P+
Sbjct:   33 VKSLPGFEGQLPFELETGYIGVGEEEEVQLFYYFIKSERNPKEDPLILWLTGGPGCSAIS-GLLFENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSIIFLDQPV 135          

HSP 2 Score: 23.483 bits (49), Expect = 5.485e-15
Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 1
Query:  604 PVGVGFSYSNT 636
            PVG GFSYS T
Sbjct:  134 PVGTGFSYSRT 144          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCPB_NANOT (Carboxypeptidase S1 homolog B OS=Nannizzia otae (strain CBS 113480) GN=SCPB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.098e-15
Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 2
Query:  404 FYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPL 610
            F+WF EA +DP++ PL +W+NGGPG SS+ +G   E GP  + PD  +  LNP+SWN   N+L+LD P+
Sbjct:   85 FFWFFEARKDPENAPLSIWMNGGPGSSSM-FGMMTENGPCFVNPDSNSTRLNPHSWNNEVNMLYLDQPV 152          
The following BLAST results are available for this feature:
BLAST of FC920307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
SCP16_ARATH1.229e-1537.60Serine carboxypeptidase-like 16 OS=Arabidopsis tha... [more]
YBY9_YEAST1.475e-1546.59Putative serine carboxypeptidase YBR139W OS=Saccha... [more]
SCP11_ARATH1.605e-1538.40Serine carboxypeptidase-like 11 OS=Arabidopsis tha... [more]
SCP14_ARATH2.096e-1537.93Serine carboxypeptidase-like 14 OS=Arabidopsis tha... [more]
VCP_AEDAE2.496e-1540.48Vitellogenic carboxypeptidase OS=Aedes aegypti GN=... [more]
SCP8_ARATH2.501e-1537.62Serine carboxypeptidase-like 8 OS=Arabidopsis thal... [more]
SCP12_ARATH2.737e-1540.52Serine carboxypeptidase-like 12 OS=Arabidopsis tha... [more]
SCP7_ARATH4.669e-1536.72Serine carboxypeptidase-like 7 OS=Arabidopsis thal... [more]
SCP1_ARATH5.485e-1540.38Serine carboxypeptidase-like 1 OS=Arabidopsis thal... [more]
SCPB_NANOT6.098e-1549.28Carboxypeptidase S1 homolog B OS=Nannizzia otae (s... [more]

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Properties
Property NameValue
Genbank descriptionC32006F07EF RVDevelop1 Citrus clementina cDNA clone C32006F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920307 ID=FC920307; Name=FC920307; organism=Citrus clementina; type=EST; length=734bp
GGACATCATTCAAATCATTCATCGAACCCACTATTCTGGACAGAGAAATC
AAAAGGGCTTAAGTTCTGTTCAGCAGATAAACTGAACAAAGAAAAAAAAA
AAATTCCTCAGAACACTATCATTGGCTCCAACGTTTTTGCTTGATTATGT
CTTCTTTATAAGTCGCAGTACCCCAGTACACTAAACCATATAAAAAATGG
CTTATAATCCAAAAGGGGCTTCCTTTCTTGTTCAAATCTTGTTCATTTGC
ATAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGTTGCCCAGCA
AAAACTTGACAGAGTTGGGAAGCTACCTGGGCAAAATTTCAATGTCAACT
TTGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCCGGGAGGGCT
CTCTTTTATTGGTTCGTTGAAGCTGTTGAAGATCCTGATTCCAAGCCTCT
TGTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTGCTTATGGAG
AGGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGGGAAGACCTTA
TACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCTGTTTCTTGA
TTCCCCGTTGGTGTTGGTTTTTCATATTCAAATACATCCTCTGATATTAC
GACCAATGGCGATAAAAGGACTGCGGAGGATTCCCTAAAATTTTACTAAA
GTGTTAGAACGGTTTCACATTTTAAGGAGGGATT
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