FC920307

Overview
NameFC920307
Unique NameFC920307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11134 contig Ccv1_Contig11134:67..801. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP47_ARATH (Serine carboxypeptidase-like 47 OS=Arabidopsis thaliana GN=SCPL47 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.103e-15
Identity = 35/87 (40.23%), Postives = 55/87 (63.22%), Query Frame = 2
Query:  350 FAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPL 610
            F HY+GY ++       +FY+F E+  +  + P+V+WL GGPGCSS +     E GPF I  D  +LY N + W++V+NI+++D P+
Sbjct:   96 FGHYAGYYSLPHSKSAKMFYFFFES-RNKTTDPVVIWLTGGPGCSS-SVAMFYENGPFKISKD-LSLYWNDFGWDKVSNIIYVDQPV 179          

HSP 2 Score: 27.335 bits (59), Expect = 7.103e-15
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGD 663
            PVG GFSY++  SDI  + D
Sbjct:  178 PVGTGFSYTSDESDIRNDED 197          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP15_ARATH (Serine carboxypeptidase-like 15 OS=Arabidopsis thaliana GN=SCPL15 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.964e-15
Identity = 49/158 (31.01%), Postives = 79/158 (50.00%), Query Frame = 2
Query:  224 FLVQILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDG-----KTLYLNPYSWNQVANILFLDSPLVLVFHIQIHPLILRPMAIKGLRRI 682
            F + +L  C++  +  A S+  +          LPG    + F   +GY+ V ++    LFY+F+++  +P+  PL++WL GGPGCSS + G   E GP   K +       TL    YSW +VANI++LD P+   F    +P    P     ++R+
Sbjct:    6 FKLLLLLQCVLVLIQHADSSSIIRY--------LPGFEGPLPFELETGYIGVGQKEEDQLFYYFIKSENNPEEDPLLVWLTGGPGCSSFS-GLVYENGPLAFKVETYNGSVPTLVSTTYSWTKVANIIYLDQPVGTGFSYSRNPFADIPSDTGSVKRV 154          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP13_ARATH (Serine carboxypeptidase-like 13 OS=Arabidopsis thaliana GN=SCPL13 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.964e-15
Identity = 44/113 (38.94%), Postives = 65/113 (57.52%), Query Frame = 2
Query:  323 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIK-----PDGKTLYLNPYSWNQVANILFLDSPLVLVFHIQIHPLI 646
            LPG    + F   +GY+ + EE    LFY+F+++ ++P+  PL+LWL+GGPGCSS+  G   E GP  +K         +L    YSW ++ANI+FLD P+   F     PL+
Sbjct:   29 LPGFEGPLPFELETGYIGIGEEEEVQLFYYFIKSEKNPEEDPLLLWLSGGPGCSSLT-GLLFENGPVALKFEVYNGSVPSLVSTTYSWTKMANIIFLDQPVGSGFSYSRTPLV 140          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP9_ARATH (Serine carboxypeptidase-like 9 OS=Arabidopsis thaliana GN=SCPL9 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.263e-15
Identity = 39/101 (38.61%), Postives = 58/101 (57.43%), Query Frame = 2
Query:  323 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIK-----PDGKTLYLNPYSWNQVANILFLDSPL 610
            LPG    + F   +GY+ + EE     FY+F+++ ++P   PL++WLNGGPGCS ++ G   E GP  +K         +L    YSW + ANI+FLD P+
Sbjct:   28 LPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLS-GLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPV 127          

HSP 2 Score: 23.8682 bits (50), Expect = 9.263e-15
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTN 657
            PVG GFSYS T  + T++
Sbjct:  126 PVGSGFSYSKTPIERTSD 143          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP18_ARATH (Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.358e-14
Identity = 42/119 (35.29%), Postives = 66/119 (55.46%), Query Frame = 2
Query:  314 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDG-----KTLYLNPYSWNQVANILFLDSPLVLVFHIQIHPLILRP 655
            +  LPG    + F   +GY+ V E     LFY+F+++  +P+  PL++WL GGP C++++   A EIGP   K +G      +L    YSW +VA+I+FLD P+   +     PL  +P
Sbjct:   29 ISYLPGFEGLLPFHLETGYIGVGEGEKVQLFYYFIKSENNPEEDPLIIWLTGGPACTALS-ALAFEIGPLTFKTEGYNGGLPSLVSTSYSWTKVASIIFLDQPVGTGYSYSTTPLSYKP 146          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP5_ARATH (Serine carboxypeptidase-like 5 OS=Arabidopsis thaliana GN=SCPL5 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.564e-14
Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 2
Query:  323 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDG-----KTLYLNPYSWNQVANILFLDSPL 610
            LPG   ++ F   +GY+ + EE    LFY+F+++  +P   PL+LWL+GGPGCSSI+ G   E GP  +K D       +L    YSW + ++++FLD P+
Sbjct:   35 LPGFEGSLPFELETGYIGIGEEEEVQLFYYFIKSERNPKEDPLLLWLSGGPGCSSIS-GLLFENGPLAMKLDVYNGTLPSLVPTTYSWTKTSSMIFLDQPV 134          

HSP 2 Score: 23.483 bits (49), Expect = 1.564e-14
Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 1
Query:  604 PVGVGFSYSNT 636
            PVG GFSYS T
Sbjct:  133 PVGTGFSYSRT 143          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP2_ARATH (Serine carboxypeptidase-like 2 OS=Arabidopsis thaliana GN=SCPL2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.031e-14
Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 2
Query:  323 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDG-----KTLYLNPYSWNQVANILFLDSPL 610
            LPG    + F   +GY+ + EE    LFY+F+++  +P   PL+LWL GGPGCSSI+ G   E GP  +K D       +L    YSW + ++++FLD P+
Sbjct:   36 LPGFEGPLPFELETGYIGIGEEEEVQLFYYFIKSERNPKEDPLILWLTGGPGCSSIS-GLLFENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSMIFLDQPV 135          

HSP 2 Score: 23.483 bits (49), Expect = 2.031e-14
Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 1
Query:  604 PVGVGFSYSNT 636
            PVG GFSYS T
Sbjct:  134 PVGTGFSYSRT 144          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: CPS1_PENJA (Carboxypeptidase S1 OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.034e-14
Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 2
Query:  359 YSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPLVLVF 622
            YSGY++V   S   +++WF EA  +P   PL  W NGGPGCSS+  G  +E GP H      T  LN  SWN  AN++++D P+ + F
Sbjct:   17 YSGYLSVG--SNMNMWFWFFEARNNPQQAPLAAWFNGGPGCSSM-IGLFQENGPCHFVNGDSTPSLNENSWNNYANMIYIDQPIGVGF 101          

HSP 2 Score: 22.3274 bits (46), Expect = 2.034e-14
Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITT 654
            P+GVGFSY   + D+T+
Sbjct:   96 PIGVGFSYG--TDDVTS 110          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP19_ARATH (Serine carboxypeptidase-like 19 OS=Arabidopsis thaliana GN=SCPL19 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.317e-14
Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = 2
Query:  212 KGASFLVQILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDG-----KTLYLNPYSWNQVANILFLDSP 607
            +  SF+V  LF+  +F++        +       V  LPG    + F   +GYV++ E     LFY+FV++  +P++ PL++WL GGPGCSSI  G     GP   K D        L L  +SW +VANIL+L++P
Sbjct:    2 RNLSFIV--LFLLTLFFIHHLVDASLL-------VKSLPGFEGPLPFELETGYVSIGESGDVELFYYFVKSERNPENDPLMIWLTGGPGCSSIC-GLLFANGPLAFKGDEYNGTVPPLELTSFSWTKVANILYLEAP 128          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP50_ARATH (Serine carboxypeptidase-like 50 OS=Arabidopsis thaliana GN=SCPL50 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.454e-14
Identity = 39/93 (41.94%), Postives = 57/93 (61.29%), Query Frame = 2
Query:  362 SGYVTVNEESGRALFYWFVEAVED----PDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPLVLVFHI 628
            SGY+ V    G ++FY F EA E     PD+ PL++WL GGPGCSS+  G   E+GP+ +      L  NP +WN++  +LF+D+P+ + F I
Sbjct:   37 SGYLPVKPAPGSSMFYAFYEAQEPTTPLPDT-PLLVWLQGGPGCSSMI-GNFYELGPWRVVSRATDLERNPGAWNRLFGLLFVDNPIGVGFSI 127          

HSP 2 Score: 25.7942 bits (55), Expect = 4.454e-14
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTN 657
            P+GVGFS + +  DI TN
Sbjct:  120 PIGVGFSIAASQQDIPTN 137          
The following BLAST results are available for this feature:
BLAST of FC920307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
SCP47_ARATH7.103e-1540.23Serine carboxypeptidase-like 47 OS=Arabidopsis tha... [more]
SCP15_ARATH7.964e-1531.01Serine carboxypeptidase-like 15 OS=Arabidopsis tha... [more]
SCP13_ARATH7.964e-1538.94Serine carboxypeptidase-like 13 OS=Arabidopsis tha... [more]
SCP9_ARATH9.263e-1538.61Serine carboxypeptidase-like 9 OS=Arabidopsis thal... [more]
SCP18_ARATH1.358e-1435.29Serine carboxypeptidase-like 18 OS=Arabidopsis tha... [more]
SCP5_ARATH1.564e-1439.60Serine carboxypeptidase-like 5 OS=Arabidopsis thal... [more]
SCP2_ARATH2.031e-1439.60Serine carboxypeptidase-like 2 OS=Arabidopsis thal... [more]
CPS1_PENJA2.034e-1443.18Carboxypeptidase S1 OS=Penicillium janthinellum PE... [more]
SCP19_ARATH2.317e-1435.77Serine carboxypeptidase-like 19 OS=Arabidopsis tha... [more]
SCP50_ARATH4.454e-1441.94Serine carboxypeptidase-like 50 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC32006F07EF RVDevelop1 Citrus clementina cDNA clone C32006F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920307 ID=FC920307; Name=FC920307; organism=Citrus clementina; type=EST; length=734bp
GGACATCATTCAAATCATTCATCGAACCCACTATTCTGGACAGAGAAATC
AAAAGGGCTTAAGTTCTGTTCAGCAGATAAACTGAACAAAGAAAAAAAAA
AAATTCCTCAGAACACTATCATTGGCTCCAACGTTTTTGCTTGATTATGT
CTTCTTTATAAGTCGCAGTACCCCAGTACACTAAACCATATAAAAAATGG
CTTATAATCCAAAAGGGGCTTCCTTTCTTGTTCAAATCTTGTTCATTTGC
ATAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGTTGCCCAGCA
AAAACTTGACAGAGTTGGGAAGCTACCTGGGCAAAATTTCAATGTCAACT
TTGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCCGGGAGGGCT
CTCTTTTATTGGTTCGTTGAAGCTGTTGAAGATCCTGATTCCAAGCCTCT
TGTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTGCTTATGGAG
AGGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGGGAAGACCTTA
TACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCTGTTTCTTGA
TTCCCCGTTGGTGTTGGTTTTTCATATTCAAATACATCCTCTGATATTAC
GACCAATGGCGATAAAAGGACTGCGGAGGATTCCCTAAAATTTTACTAAA
GTGTTAGAACGGTTTCACATTTTAAGGAGGGATT
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