FC920308

Overview
NameFC920308
Unique NameFC920308
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length427
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7687 contig Ccv1_Contig7687:1..427. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTI (Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.054e-23
Identity = 55/136 (40.44%), Postives = 80/136 (58.82%), Query Frame = 2
Query:   14 HQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDRK 421
            H + + NLR  M  TG   A++LDTKGPEIRT  L+ G  + LK GQ  T +TD ++ G+  ++ ++Y+    D+  G+ +L  DG I   V    ++   V C+  N+  LGE K VNLPGV + LP L EKD++
Sbjct:   43 HGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGLIGMEVTA--IEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQ 176          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK1_TRYBB (Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=PYK1 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.347e-23
Identity = 59/142 (41.55%), Postives = 80/142 (56.34%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDRK 421
            SHEYHQ T+NN+R A    G+   + LDTKGPEIRTG  KDG+ +    G  + ++TD  Y   G +    + Y +L   V+PG  I   DG ++  V+       L KC   N   L +R+ +NLPG  VDLP ++EKDRK
Sbjct:   57 SHEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGE-VSFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTNAVRPGGSIYVDDGVMTLRVVSKEDDRTL-KCHVNNHHRLTDRRGINLPGCEVDLPAVSEKDRK 196          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_EMENI (Pyruvate kinase OS=Emericella nidulans GN=pkiA PE=3 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 1.521e-22
Identity = 61/141 (43.26%), Postives = 80/141 (56.74%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA-MVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            S+EYHQ  +++ R A     G   A+ LDTKGPEIRTG     K I +K G E+ ISTD  Y    D+  + + YK +   +  G +I   DG +SF VLE  V    ++ RC N+  +  RK VNLPG  VDLP L+EKD
Sbjct:   70 SYEYHQSVIDHAREAEKQQAGRPVAIALDTKGPEIRTGNTVGDKDIPIKAGHEMNISTDEQYATASDDQNMYVDYKNITKVISAGKLIYVDDGILSFEVLEV-VDDKTLRVRCLNNGNISSRKGVNLPGTDVDLPALSEKD 209          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK2_TRYBB (Pyruvate kinase 2 OS=Trypanosoma brucei brucei GN=PYK2 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.987e-22
Identity = 59/142 (41.55%), Postives = 78/142 (54.93%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDRK 421
            SHEYHQ T+NN+R A    G+   + LDTKGPEIRTG  KDG+ +    G  + ++TD  Y   G +    + Y +L   V  G  I   DG ++  VL       L KC   N   L +R+ +NLPG  VDLP ++EKDRK
Sbjct:   57 SHEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGE-VTFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTKAVPVGGSIYVDDGVMTLRVLSKEDDRTL-KCHVNNHHRLTDRRGINLPGCEVDLPAVSEKDRK 196          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_SCHPO (Pyruvate kinase OS=Schizosaccharomyces pombe GN=pyk1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.595e-22
Identity = 57/142 (40.14%), Postives = 81/142 (57.04%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGIL-CAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDR 418
            S+EYHQ  ++N R A     +   A+ LDTKGPEIRTG    G    +  G E+  +TD  Y  K ++ ++ + YK +   +QPG +I   DG +SFTV+E  V    +K R  N+  +  +K VNLP   VDLP L+EKD+
Sbjct:   63 SYEYHQSVIDNARKASATNPLFPLAIALDTKGPEIRTGLTVGGTDYPISSGHEMIFTTDDAYAEKCNDKVMYIDYKNITKVIQPGRIIYVDDGILSFTVIE-KVDDKNLKVRVNNNGKISSKKGVNLPKTDVDLPALSEKDK 203          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYM_PONAB (Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2 PE=2 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 3.389e-22
Identity = 65/148 (43.92%), Postives = 85/148 (57.43%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA---MVNTGIL---CAVMLDTKGPEIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            +HEYH ET+ N+RTA     +  IL    AV LDTKGPEIRTG +K      ++LK+G  + I+ D  Y  K DEN++ + YK +   V+ GS I   DG IS  V +    A  +    EN   LG +K VNLPG  VDLP ++EKD
Sbjct:   80 THEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKG--ADFLLTEVENGGSLGSKKGVNLPGAAVDLPAVSEKD 225          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYM_HUMAN (Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=PKM2 PE=1 SV=4)

HSP 1 Score: 103.605 bits (257), Expect = 3.389e-22
Identity = 65/148 (43.92%), Postives = 85/148 (57.43%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA---MVNTGIL---CAVMLDTKGPEIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            +HEYH ET+ N+RTA     +  IL    AV LDTKGPEIRTG +K      ++LK+G  + I+ D  Y  K DEN++ + YK +   V+ GS I   DG IS  V +    A  +    EN   LG +K VNLPG  VDLP ++EKD
Sbjct:   80 THEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKG--ADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKD 225          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYM_RAT (Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicus GN=Pkm2 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 7.550e-22
Identity = 65/148 (43.92%), Postives = 84/148 (56.76%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA---MVNTGIL---CAVMLDTKGPEIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            +HEYH ET+ N+R A     +  IL    AV LDTKGPEIRTG +K      ++LK+G  + I+ D  Y  K DEN++ + YK +   V+ GS I   DG IS  V E    A  +    EN   LG +K VNLPG  VDLP ++EKD
Sbjct:   80 THEYHAETIKNVRAATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKEKG--ADYLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKD 225          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYM_MOUSE (Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=Pkm2 PE=1 SV=4)

HSP 1 Score: 102.449 bits (254), Expect = 7.550e-22
Identity = 65/148 (43.92%), Postives = 84/148 (56.76%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA---MVNTGIL---CAVMLDTKGPEIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            +HEYH ET+ N+R A     +  IL    AV LDTKGPEIRTG +K      ++LK+G  + I+ D  Y  K DEN++ + YK +   V+ GS I   DG IS  V E    A  +    EN   LG +K VNLPG  VDLP ++EKD
Sbjct:   80 THEYHAETIKNVREATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKEKG--ADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKD 225          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_DROME (Pyruvate kinase OS=Drosophila melanogaster GN=PyK PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.861e-22
Identity = 61/149 (40.94%), Postives = 86/149 (57.72%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILC------AVMLDTKGPEIRTGFLKDG--KPIQLKQGQEITIST--DYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDR 418
            SHEYH  T+ N+R A+ N           A+ LDTKGPEIRTG +       I+LK+G++I ++T  ++  KG   ++ + Y+ +   V+PG+ +   DG IS  V E  V    + C  EN   LG RK VNLPGV VDLP ++EKD+
Sbjct:   83 SHEYHAATVANVRQAVKNYSAKLGYEHPVAIALDTKGPEIRTGLIGGSGTAEIELKKGEKIKLTTNKEFLEKGSLEIVYVDYENIVNVVKPGNRVFVDDGLISLIVRE--VGKDSLTCEVENGGSLGSRKGVNLPGVPVDLPAVSEKDK 229          
The following BLAST results are available for this feature:
BLAST of FC920308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
KPYK1_SALTI1.054e-2340.44Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3... [more]
KPYK1_TRYBB2.347e-2341.55Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=... [more]
KPYK_EMENI1.521e-2243.26Pyruvate kinase OS=Emericella nidulans GN=pkiA PE=... [more]
KPYK2_TRYBB1.987e-2241.55Pyruvate kinase 2 OS=Trypanosoma brucei brucei GN=... [more]
KPYK_SCHPO2.595e-2240.14Pyruvate kinase OS=Schizosaccharomyces pombe GN=py... [more]
KPYM_PONAB3.389e-2243.92Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2... [more]
KPYM_HUMAN3.389e-2243.92Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=... [more]
KPYM_RAT7.550e-2243.92Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicu... [more]
KPYM_MOUSE7.550e-2243.92Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=... [more]
KPYK_DROME9.861e-2240.94Pyruvate kinase OS=Drosophila melanogaster GN=PyK ... [more]

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Properties
Property NameValue
Genbank descriptionC32006F09EF RVDevelop1 Citrus clementina cDNA clone C32006F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920308 ID=FC920308; Name=FC920308; organism=Citrus clementina; type=EST; length=427bp
ATCTCATGAGTATCACCAGGAAACGCTTAATAATCTCAGAACTGCCATGG
TCAATACTGGGATTCTCTGCGCTGTTATGCTTGACACAAAGGGTCCAGAG
ATTCGAACTGGGTTCTTGAAAGATGGAAAGCCTATTCAGCTGAAACAAGG
TCAGGAAATTACCATATCTACTGATTACACCATAAAGGGTGACGAGAACA
TGATTTGCATGAGCTACAAAAAGTTGGCAGTGGATGTCCAGCCAGGGAGT
GTGATACTTTGTTCAGACGGCACAATCTCATTCACTGTTCTAGAATGTAA
TGTGAAAGCTGGTTTGGTTAAATGCCGCTGTGAGAACTCTGCTATGCTTG
GTGAAAGGAAAAATGTTAATCTCCCAGGGGTTATTGTGGATCTCCCCACC
TTGACAGAGAAAGACAGGAAGATATCT
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