FC920308

Overview
NameFC920308
Unique NameFC920308
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length427
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_STAAB (Pyruvate kinase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=pyk PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.747e-21
Identity = 58/138 (42.03%), Postives = 81/138 (58.70%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            SHE H+  ++ +R        + A++LDTKGPEIRT  +KDG  I+L++G E+ +S +  ++G      ++Y+ L  DVQ GS IL  DG I   V + +     VKC   NS  L  +K VNLPGV V LP +TEKD
Sbjct:   39 SHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGI-IELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKKGVNLPGVRVSLPGITEKD 174          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_STAA8 (Pyruvate kinase OS=Staphylococcus aureus (strain NCTC 8325) GN=pyk PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.747e-21
Identity = 58/138 (42.03%), Postives = 81/138 (58.70%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            SHE H+  ++ +R        + A++LDTKGPEIRT  +KDG  I+L++G E+ +S +  ++G      ++Y+ L  DVQ GS IL  DG I   V + +     VKC   NS  L  +K VNLPGV V LP +TEKD
Sbjct:   39 SHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGI-IELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKKGVNLPGVRVSLPGITEKD 174          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_STAA3 (Pyruvate kinase OS=Staphylococcus aureus (strain USA300) GN=pyk PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.747e-21
Identity = 58/138 (42.03%), Postives = 81/138 (58.70%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            SHE H+  ++ +R        + A++LDTKGPEIRT  +KDG  I+L++G E+ +S +  ++G      ++Y+ L  DVQ GS IL  DG I   V + +     VKC   NS  L  +K VNLPGV V LP +TEKD
Sbjct:   39 SHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGI-IELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKKGVNLPGVRVSLPGITEKD 174          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_BACPY (Pyruvate kinase OS=Bacillus psychrophilus GN=pyk PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.747e-21
Identity = 57/138 (41.30%), Postives = 81/138 (58.70%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            +H  H+  ++++R      G +  ++LDTKGPEIRT  + +GK ++L  GQ+I IS    ++G+ ++  +SY KL  DV  GSVIL  DG I   V   +V  GL+     NS  L   K VN+PGV V LP +TEKD
Sbjct:   39 NHAEHKARIDSIRKVAREKGKVVGILLDTKGPEIRTHSMMNGK-LELVTGQKIDISMTQ-VEGNNDVFSVSYDKLIEDVNEGSVILLDDGLIQLEVTGKDVARGLIHTLIINSGSLSNNKGVNIPGVSVQLPGMTEKD 174          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_BACST (Pyruvate kinase OS=Bacillus stearothermophilus GN=pyk PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 8.347e-21
Identity = 58/138 (42.03%), Postives = 81/138 (58.70%), Query Frame = 2
Query:    5 HEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDR 418
            HE H   + N+R A   TG   A++LDTKGPEIRT  +++G  I+LK+G ++ IS    + G    I ++Y  L  DV  G+ IL  DG IS  V   + +AG +     N  +L  +K VN+PGV V+LP +TEKDR
Sbjct:   41 HEEHGRRIANIREAAKRTGRTVAILLDTKGPEIRTHNMENGA-IELKEGSKLVISMSEVL-GTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVLKNKKGVNVPGVKVNLPGITEKDR 176          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_STAES (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pyk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.090e-20
Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            SHE H+  ++ +R           ++LDTKGPEIRT  +KDG  I L++G+E+ +S +  ++G      ++Y+ L  DV  GS IL  DG +   V E N   G VKC   N+  L  +K VNLPGV V+LP +T+KD
Sbjct:   39 SHEEHKARIDTIRKVAKRLNKTIGLLLDTKGPEIRTHNMKDGL-IVLEKGKEVIVSMN-EVEGTPEKFSVTYENLINDVNIGSYILLDDGLVELQVKEINKDKGEVKCDILNTGELKNKKGVNLPGVKVNLPGITDKD 174          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_STAEQ (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pyk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.090e-20
Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            SHE H+  ++ +R           ++LDTKGPEIRT  +KDG  I L++G+E+ +S +  ++G      ++Y+ L  DV  GS IL  DG +   V E N   G VKC   N+  L  +K VNLPGV V+LP +T+KD
Sbjct:   39 SHEEHKARIDTIRKVAKRLNKTIGLLLDTKGPEIRTHNMKDGL-IVLEKGKEVIVSMN-EVEGTPEKFSVTYENLINDVNIGSYILLDDGLVELQVKEINKDKGEVKCDILNTGELKNKKGVNLPGVKVNLPGITDKD 174          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_AGABI (Pyruvate kinase OS=Agaricus bisporus GN=pkiA PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.090e-20
Identity = 58/143 (40.56%), Postives = 79/143 (55.24%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNT--GILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDR 418
            +HEYHQ  ++N R  + N   G   A+ LDTKGPEIRTG  +DG    +K G E  ++TD  Y+   D  ++ + Y  LA    PG +I   DG IS  +L  ++    +  R  N+  L  RK VNLP   VDLP L+EKD+
Sbjct:   70 THEYHQSVIDNTRQMIKNDPHGRPVAIALDTKGPEIRTGQTRDGNDYPIKAGDEFIVTTDPKYSDICDNKVLFVDYANLASVTAPGKLIYIDDGIISLLIL--SIDGMNLHVRALNNGTLSSRKGVNLPKTDVDLPPLSEKDK 210          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK2_CANGA (Pyruvate kinase 2 OS=Candida glabrata GN=PYK2 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.090e-20
Identity = 58/143 (40.56%), Postives = 80/143 (55.94%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA-MVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDRK 421
            S+EYHQ  ++N R +  V  G   A+ LDTKGPEIRTG   D     +    E+  +TD  Y    D+ ++ + YK +   +QPG VI   DG +SF VLE  V    +K +  N+  +   K VNLPG  VDLP L+EKD++
Sbjct:   57 SYEYHQSVIDNARKSEQVYPGRPLAIALDTKGPEIRTGTNVDDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVIQPGKVIYVDDGVLSFEVLEV-VDDKTLKVKSLNAGKISSHKGVNLPGTDVDLPALSEKDKE 198          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_YARLI (Pyruvate kinase OS=Yarrowia lipolytica GN=PYK1 PE=3 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 1.860e-20
Identity = 56/142 (39.44%), Postives = 78/142 (54.93%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVN-TGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDR 418
            S+EYHQ  + N R +     G   A+ LDTKGPEIRTG  KD K   +K G  +  ST+  Y  + D+ ++ + Y  +   +  G +I   DG +SF VLE  +    +K    N+  +  RK VNLPG  VDLP L+EKD+
Sbjct:   67 SYEYHQSVIENARESEQQFQGRPLAIALDTKGPEIRTGVTKDDKDWDVKAGHVMLFSTNPKYKDQCDDKIMYIDYTNIVKQIDIGKIIFVDDGVLSFKVLE-KIDGETLKVETLNNGKISSRKGVNLPGTDVDLPALSEKDK 207          
The following BLAST results are available for this feature:
BLAST of FC920308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
KPYK_STAAB3.747e-2142.03Pyruvate kinase OS=Staphylococcus aureus (strain b... [more]
KPYK_STAA83.747e-2142.03Pyruvate kinase OS=Staphylococcus aureus (strain N... [more]
KPYK_STAA33.747e-2142.03Pyruvate kinase OS=Staphylococcus aureus (strain U... [more]
KPYK_BACPY3.747e-2141.30Pyruvate kinase OS=Bacillus psychrophilus GN=pyk P... [more]
KPYK_BACST8.347e-2142.03Pyruvate kinase OS=Bacillus stearothermophilus GN=... [more]
KPYK_STAES1.090e-2040.58Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_STAEQ1.090e-2040.58Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_AGABI1.090e-2040.56Pyruvate kinase OS=Agaricus bisporus GN=pkiA PE=2 ... [more]
KPYK2_CANGA1.090e-2040.56Pyruvate kinase 2 OS=Candida glabrata GN=PYK2 PE=3... [more]
KPYK_YARLI1.860e-2039.44Pyruvate kinase OS=Yarrowia lipolytica GN=PYK1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32006F09EF RVDevelop1 Citrus clementina cDNA clone C32006F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920308 ID=FC920308; Name=FC920308; organism=Citrus clementina; type=EST; length=427bp
ATCTCATGAGTATCACCAGGAAACGCTTAATAATCTCAGAACTGCCATGG
TCAATACTGGGATTCTCTGCGCTGTTATGCTTGACACAAAGGGTCCAGAG
ATTCGAACTGGGTTCTTGAAAGATGGAAAGCCTATTCAGCTGAAACAAGG
TCAGGAAATTACCATATCTACTGATTACACCATAAAGGGTGACGAGAACA
TGATTTGCATGAGCTACAAAAAGTTGGCAGTGGATGTCCAGCCAGGGAGT
GTGATACTTTGTTCAGACGGCACAATCTCATTCACTGTTCTAGAATGTAA
TGTGAAAGCTGGTTTGGTTAAATGCCGCTGTGAGAACTCTGCTATGCTTG
GTGAAAGGAAAAATGTTAATCTCCCAGGGGTTATTGTGGATCTCCCCACC
TTGACAGAGAAAGACAGGAAGATATCT
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