FC920308

Overview
NameFC920308
Unique NameFC920308
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length427
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7687 contig Ccv1_Contig7687:1..427. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_XENLA (Pyruvate kinase muscle isozyme OS=Xenopus laevis GN=pkm PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.429e-20
Identity = 61/148 (41.22%), Postives = 80/148 (54.05%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGIL------CAVMLDTKGPEIRTGFLKDG--KPIQLKQGQEITISTDYTIKG--DENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            +HEYH  T+ N+R A  +           AV LDTKGPEIRTG +K      ++LK+G  + I+ D   +   DEN++ + YK L   V+PGS I   DG IS  V E  +         EN  MLG +K VNLPG  VDLP ++ KD
Sbjct:   76 THEYHAGTIKNVREATESLASNPIHYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATMRITLDDAFQENCDENVLWVDYKNLTKVVKPGSKIYVDDGLISLLVKE--IGPDFCVTEIENGGMLGSKKGVNLPGAAVDLPAVSSKD 221          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_NEUCR (Pyruvate kinase OS=Neurospora crassa GN=pyk-1 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.429e-20
Identity = 58/143 (40.56%), Postives = 82/143 (57.34%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA-MVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGD---ENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDR 418
            S+EYHQ  ++N R A  V+ G   A+ LDTKGPEIRTG  K+ + I +  G  + I+TD   K +   E+M  + Y  +   + PG +I   DG ++F VLE  V    +K +  N+  +  RK VNLP   VDLP L+EKD+
Sbjct:   69 SYEYHQSVIDNARQAEKVHPGRPIAIALDTKGPEIRTGNTKNDEDIPISAGTILNITTDEKYKDECTIEHMY-VDYVNITKVIAPGRIIYVDDGVLAFEVLEI-VDDKTIKVKARNNGYISSRKGVNLPNTDVDLPALSEKDK 209          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_DEBHA (Pyruvate kinase OS=Debaryomyces hansenii GN=PYK1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.172e-20
Identity = 56/142 (39.44%), Postives = 80/142 (56.34%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAM-VNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDR 418
            S+EYHQ  ++N + +  +  G   A+ LDTKGPEIRTG   D K   +    E+  +TD  Y  K D+ ++ + YK +   ++ G +I   DG +SF VL+  V    +K R  NS  +   K VNLPG  VDLP L+EKD+
Sbjct:   60 SYEYHQSVIDNAKQSEEIYKGRPLAIALDTKGPEIRTGTTIDDKDYPILPNHEMIFTTDEAYAKKCDDKVMFIDYKNITKVIEAGKIIYIDDGVVSFEVLQI-VDDKTLKVRSVNSGKICSHKGVNLPGTDVDLPALSEKDK 200          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_CHICK (Pyruvate kinase muscle isozyme OS=Gallus gallus GN=PKM2 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 3.172e-20
Identity = 60/148 (40.54%), Postives = 81/148 (54.73%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVN------TGILCAVMLDTKGPEIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            +HEYH+ T+ N+R A  +      T    A+ LDTKGPEIRTG +K      ++LK+G  + ++ D  +    DEN++ + YK L   +  GS I   DG IS  V E       V    EN  MLG +K VNLPG  VDLP ++EKD
Sbjct:   79 THEYHEGTIKNVREATESFASDPITYRPVAIALDTKGPEIRTGLIKGSGTAEVELKKGAALKVTLDNAFMENCDENVLWVDYKNLIKVIDVGSKIYVDDGLISLLVKEKG--KDFVMTEVENGGMLGSKKGVNLPGAAVDLPAVSEKD 224          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_BACSU (Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 4.143e-20
Identity = 55/138 (39.86%), Postives = 82/138 (59.42%), Query Frame = 2
Query:    8 EYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDRK 421
            E H   + N+R A    G    ++LDTKGPEIRT  +++G  I+L+ G+E+ IS D  + G  + I ++Y+ L  DV+ GS IL  DG I   VL+ +     +K +  N+  L  +K VN+PGV V+LP +TEKD +
Sbjct:   41 EEHGARIKNIREASKKLGKNVGILLDTKGPEIRTHTMENGG-IELETGKELIISMDEVV-GTTDKISVTYEGLVHDVEQGSTILLDDGLIGLEVLDVDAAKREIKTKVLNNGTLKNKKGVNVPGVSVNLPGITEKDAR 176          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_TRIRE (Pyruvate kinase OS=Trichoderma reesei GN=pki1 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.205e-19
Identity = 55/142 (38.73%), Postives = 77/142 (54.23%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMV-NTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDR 418
            S+EYHQ  ++N+R ++  + G   A+ LDTKGPEIRTG       I +  G  +  +TD  Y    D   + + YK +   +QPG VI   DG ++F VL        V+ R  N+  +  RK VNLP   VDLP L+EKD+
Sbjct:   79 SYEYHQSVIDNVRASVAAHPGRPVAIALDTKGPEIRTGNTAGDVDIPISAGTVMNFTTDEKYATACDTQNMYVDYKNITKVIQPGRVIYVDDGVLAFDVLSIKDDQ-TVEVRARNNGFISSRKGVNLPNTDVDLPALSEKDK 219          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_STAS1 (Pyruvate kinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=pyk PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.574e-19
Identity = 54/134 (40.30%), Postives = 77/134 (57.46%), Query Frame = 2
Query:   14 HQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            H+  ++ +R      G   A++LDTKGPEIRT  +KDG  I+L++G E+T+S    ++G      ++Y+ L  DV+ GS IL  DG I   V   +   G V C   N+  L  +K VNLPGV V LP +T+KD
Sbjct:   43 HKARIDTIRKVSKRLGKTVAILLDTKGPEIRTHNMKDGL-IELEKGSEVTVSMT-EVEGTPEKFSVTYENLINDVEEGSYILLDDGLIELQVKSIDKANGEVLCDVLNTGELKNKKGVNLPGVKVSLPGITDKD 174          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_LACDE (Pyruvate kinase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=pyk PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 2.056e-19
Identity = 51/138 (36.96%), Postives = 76/138 (55.07%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            +HE H   +N +R     TG L  + LDTKG EIRT   + GK   +  G EI +S D T  G+++MI ++Y  L  D   G  +L  DG +  T+   + +   + C  +N+ ++G +K VN PGV + LP +TEKD
Sbjct:   39 NHEEHLARMNMVREVEKKTGKLLGIALDTKGAEIRTTDQEGGK-FTINTGDEIRVSMDATKAGNKDMIHVTYPGLFDDTHVGGTVLIDDGAVGLTIKAKDEEKRELVCEAQNTGVIGSKKGVNAPGVEIRLPGITEKD 175          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_ASHGO (Pyruvate kinase OS=Ashbya gossypii GN=PYK1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.020e-18
Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAM-VNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDR 418
            S+EYHQ  ++N R +  +  G   A+ LDTKGPEIRTG   D     +    E+  +TD  Y    D+ ++ + YK +   ++ G VI   DG +SF VLE  V    +K +  N+  +   K VNLPG  VDLP L+EKD+
Sbjct:   57 SYEYHQSVIDNARKSEELYPGRPLAIALDTKGPEIRTGTTVDNVDYPIPPNHEMIFTTDDQYAKSCDDKVMFVDYKNITKVIEKGRVIYVDDGVLSFEVLEV-VDDKTLKVKSLNAGKICSHKGVNLPGTDVDLPALSEKDK 197          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYR_HUMAN (Pyruvate kinase isozymes R/L OS=Homo sapiens GN=PKLR PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.333e-18
Identity = 58/148 (39.19%), Postives = 84/148 (56.76%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGIL------CAVMLDTKGPEIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            SHEYH E++ N+R A+ +           A+ LDTKGPEIRTG L+ G    ++L +G ++ ++ D  +  +G+ N + + Y  +   V  G  I   DG IS  V +   + GLV  + EN  +LG RK VNLPG  VDLP L+E+D
Sbjct:  123 SHEYHAESIANVREAVESFAGSPLSYRPVAIALDTKGPEIRTGILQGGPESEVELVKGSQVLVTVDPAFRTRGNANTVWVDYPNIVRVVPVGGRIYIDDGLISLVVQKIGPE-GLVT-QVENGGVLGSRKGVNLPGAQVDLPGLSEQD 268          
The following BLAST results are available for this feature:
BLAST of FC920308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
KPYK_XENLA2.429e-2041.22Pyruvate kinase muscle isozyme OS=Xenopus laevis G... [more]
KPYK_NEUCR2.429e-2040.56Pyruvate kinase OS=Neurospora crassa GN=pyk-1 PE=3... [more]
KPYK_DEBHA3.172e-2039.44Pyruvate kinase OS=Debaryomyces hansenii GN=PYK1 P... [more]
KPYK_CHICK3.172e-2040.54Pyruvate kinase muscle isozyme OS=Gallus gallus GN... [more]
KPYK_BACSU4.143e-2039.86Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 S... [more]
KPYK_TRIRE1.205e-1938.73Pyruvate kinase OS=Trichoderma reesei GN=pki1 PE=3... [more]
KPYK_STAS11.574e-1940.30Pyruvate kinase OS=Staphylococcus saprophyticus su... [more]
KPYK_LACDE2.056e-1936.96Pyruvate kinase OS=Lactobacillus delbrueckii subsp... [more]
KPYK_ASHGO1.020e-1838.73Pyruvate kinase OS=Ashbya gossypii GN=PYK1 PE=3 SV... [more]
KPYR_HUMAN1.333e-1839.19Pyruvate kinase isozymes R/L OS=Homo sapiens GN=PK... [more]

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Properties
Property NameValue
Genbank descriptionC32006F09EF RVDevelop1 Citrus clementina cDNA clone C32006F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920308 ID=FC920308; Name=FC920308; organism=Citrus clementina; type=EST; length=427bp
ATCTCATGAGTATCACCAGGAAACGCTTAATAATCTCAGAACTGCCATGG
TCAATACTGGGATTCTCTGCGCTGTTATGCTTGACACAAAGGGTCCAGAG
ATTCGAACTGGGTTCTTGAAAGATGGAAAGCCTATTCAGCTGAAACAAGG
TCAGGAAATTACCATATCTACTGATTACACCATAAAGGGTGACGAGAACA
TGATTTGCATGAGCTACAAAAAGTTGGCAGTGGATGTCCAGCCAGGGAGT
GTGATACTTTGTTCAGACGGCACAATCTCATTCACTGTTCTAGAATGTAA
TGTGAAAGCTGGTTTGGTTAAATGCCGCTGTGAGAACTCTGCTATGCTTG
GTGAAAGGAAAAATGTTAATCTCCCAGGGGTTATTGTGGATCTCCCCACC
TTGACAGAGAAAGACAGGAAGATATCT
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