FC920308

Overview
NameFC920308
Unique NameFC920308
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length427
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7687 contig Ccv1_Contig7687:1..427. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYR_CANFA (Pyruvate kinase isozyme R (Fragment) OS=Canis familiaris GN=PKLR PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.741e-18
Identity = 56/148 (37.84%), Postives = 82/148 (55.41%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGIL------CAVMLDTKGPEIRTGFLKDGKP--IQLKQGQEITISTDYTIK--GDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            SHEYH +++ N+R A+ +           A+ LDTKGPEIRTG LK G    ++L +G  + ++ D   +  GD + + + Y  +   V  G  I   DG IS  V + + K   ++ + EN  +LG RK VNLPG  VDLP L+E+D
Sbjct:   68 SHEYHAQSIANIREAVESFATSPLGYRPVAIALDTKGPEIRTGVLKGGPETEVELVKGSWVLVTVDPAFRTLGDAHTVWVDYPNIVKVVPVGGRIFIDDGLISLQVKKIDRKG--LETQVENGGLLGSRKGVNLPGAEVDLPGLSEQD 213          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_CLOAB (Pyruvate kinase OS=Clostridium acetobutylicum GN=pyk PE=3 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 3.878e-18
Identity = 49/116 (42.24%), Postives = 68/116 (58.62%), Query Frame = 2
Query:   71 AVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDR 418
            A+ LDTKGPEIRTG     K ++L++G + TI     I GD     +SYK L  DV+PG+ IL  DG +  TV    ++   V C   N+ ++G  K VN+P V + LP +TEKD+
Sbjct:   62 AICLDTKGPEIRTGDFNPSK-LELQKGSKFTIVCGEEIVGDATKCSISYKDLYKDVKPGNTILIDDGLVGLTVEA--IEGTNVICTVANTGLVGSHKGVNVPNVSIQLPAMTEKDK 174          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_BACLI (Pyruvate kinase OS=Bacillus licheniformis GN=pyk PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.614e-18
Identity = 53/136 (38.97%), Postives = 75/136 (55.15%), Query Frame = 2
Query:    8 EYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            E H   + N+R A    G    ++LDTKGPEIRT  +++G  I+L  G ++ +S D  I G  + I ++Y  L  DV  GS IL  DG +   V + N     +  +  NS  L  +K VN+PGV V+LP +TEKD
Sbjct:   41 EEHGARIKNIREAAGKLGKDIGILLDTKGPEIRTHTMENGS-IELAAGSQLIVSMDEVI-GTPDKISVTYDGLIHDVSVGSTILLDDGLVGLEVTDINKDKREIVTKVMNSGTLKNKKGVNVPGVSVNLPGITEKD 174          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_KLULA (Pyruvate kinase OS=Kluyveromyces lactis GN=PYK1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.638e-18
Identity = 52/142 (36.62%), Postives = 77/142 (54.23%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAM-VNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDR 418
            S+EYHQ  ++N R +  +  G   A+ LDTKGPEIRTG   +     +    E+  +TD  Y    D+  + + YK +   ++ G +I   DG +SF VLE  +    +K +  N+  +   K VNLPG  VDLP L+EKD+
Sbjct:   57 SYEYHQSVIDNARKSEELYQGRPLAIALDTKGPEIRTGTTTNDVDYPIPPNHEMIFTTDDKYAKACDDKTMYVDYKNITKVIEAGRIIYVDDGVLSFEVLEV-IDDNTLKVKSLNAGKICSHKGVNLPGTDVDLPALSEKDK 197          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_SACKL (Pyruvate kinase OS=Saccharomyces kluyveri GN=PYK1 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.128e-17
Identity = 53/142 (37.32%), Postives = 77/142 (54.23%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAM-VNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDR 418
            S+EYHQ  ++N R +  +  G   A+ LDTKGPEIRTG   +     +    E+  S D  Y    D+ ++ + YK +   ++ G +I   DG +SF VLE  V    +K +  N+  +   K VNLPG  VDLP L+EKD+
Sbjct:   57 SYEYHQSVIDNARKSEELYPGRPLAIALDTKGPEIRTGTTTNEVDYPIPPNHEMIFSIDDKYAKACDDKVMYIDYKNITKVIEKGKIIYVDDGVLSFEVLEV-VDEQTLKVKSLNAGKICSHKGVNLPGTDVDLPALSEKDK 197          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_CLOPE (Pyruvate kinase OS=Clostridium perfringens GN=pykF PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.128e-17
Identity = 51/138 (36.96%), Postives = 73/138 (52.90%), Query Frame = 2
Query:    5 HEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDR 418
            H  H+E +  ++          A++LD KGP+IRT   K+G+  +LK G E T S    I GD     +SYK+L  D++PG  IL  DG + F V E  V+   + C       + + K VN+P V + LP +TEKDR
Sbjct:   40 HASHKEKIELIKRLRKEEKSATAILLDIKGPKIRTYNFKNGEA-ELKNGDEFTFSCGDEILGDNTKCSISYKELYEDIKPGGSILVDDGLLEFKVKE--VRGTDIICEVIEGGTIKDHKGVNVPNVPIKLPAVTEKDR 174          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_TRYBO (Pyruvate kinase OS=Trypanoplasma borreli GN=PYK PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.473e-17
Identity = 49/140 (35.00%), Postives = 77/140 (55.00%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTI--KGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            ++EYHQ+T++N+R A    GI   + LDTKGPEIRTG    G  + ++  + + ++TD T   KG      + Y  +   V  G  I   DG +   V++ + K   ++C  +N+  +  RK +NLP   VDLP ++EKD
Sbjct:   60 TYEYHQKTIDNVRKAASELGIHVGIALDTKGPEIRTGLFPAG-DVVIEAHKTVILTTDETFKEKGTAEKFYVDYMNITKVVPVGGHIFVDDGLLDLIVVKISGKD--IECVAQNTHTISNRKGINLPNADVDLPAVSEKD 196          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK1_YEAST (Pyruvate kinase 1 OS=Saccharomyces cerevisiae GN=PYK1 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.924e-17
Identity = 52/143 (36.36%), Postives = 78/143 (54.55%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAM-VNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDRK 421
            S+EYH+  ++N R +  +  G   A+ LDTKGPEIRTG   +     +    E+  +TD  Y    D+ ++ + YK +   +  G +I   DG +SF VLE  V    +K +  N+  +   K VNLPG  VDLP L+EKD++
Sbjct:   56 SYEYHKSVIDNARKSEELYPGRPLAIALDTKGPEIRTGTTTNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQVLEV-VDDKTLKVKALNAGKICSHKGVNLPGTDVDLPALSEKDKE 197          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_SACCA (Pyruvate kinase OS=Saccharomyces castellii GN=PYK1 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.283e-17
Identity = 53/142 (37.32%), Postives = 74/142 (52.11%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAM-VNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDR 418
            S+EYHQ  + N R +  +  G   A+ LDTKGPEIRTG         +    E+  STD  Y    D+ ++ + Y  +   +  G +I   DG +SF VLE  V    +K +  N+  +   K VNLPG  VDLP L+EKD+
Sbjct:   57 SYEYHQSVIENARKSEELYPGRPLAIALDTKGPEIRTGTTTGEVDYPIPPNHEMIFSTDEKYAKACDDKVMFVDYANITKVISKGKIIYVDDGVLSFEVLEV-VDGKTLKVKSLNAGKICSHKGVNLPGTDVDLPALSEKDK 197          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYR_RAT (Pyruvate kinase isozymes R/L OS=Rattus norvegicus GN=Pklr PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 5.599e-17
Identity = 55/148 (37.16%), Postives = 80/148 (54.05%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGIL------CAVMLDTKGPEIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            SHEYH E++ N+R A  +           A+ LDTKGPEIRTG L+ G    +++ +G ++ ++ D  +  +GD   + + Y  +   V  G  I   DG IS  V +   + GLV    E+  +LG RK VNLP   VDLP L+E+D
Sbjct:  123 SHEYHAESIANIREATESFATSPLSYRPVAIALDTKGPEIRTGVLQGGPESEVEIVKGSQVLVTVDPKFQTRGDAKTVWVDYHNITRVVAVGGRIYIDDGLISLVVQKIGPE-GLVT-EVEHGGILGSRKGVNLPNTEVDLPGLSEQD 268          
The following BLAST results are available for this feature:
BLAST of FC920308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
KPYR_CANFA1.741e-1837.84Pyruvate kinase isozyme R (Fragment) OS=Canis fami... [more]
KPYK_CLOAB3.878e-1842.24Pyruvate kinase OS=Clostridium acetobutylicum GN=p... [more]
KPYK_BACLI6.614e-1838.97Pyruvate kinase OS=Bacillus licheniformis GN=pyk P... [more]
KPYK_KLULA8.638e-1836.62Pyruvate kinase OS=Kluyveromyces lactis GN=PYK1 PE... [more]
KPYK_SACKL1.128e-1737.32Pyruvate kinase OS=Saccharomyces kluyveri GN=PYK1 ... [more]
KPYK_CLOPE1.128e-1736.96Pyruvate kinase OS=Clostridium perfringens GN=pykF... [more]
KPYK_TRYBO1.473e-1735.00Pyruvate kinase OS=Trypanoplasma borreli GN=PYK PE... [more]
KPYK1_YEAST1.924e-1736.36Pyruvate kinase 1 OS=Saccharomyces cerevisiae GN=P... [more]
KPYK_SACCA3.283e-1737.32Pyruvate kinase OS=Saccharomyces castellii GN=PYK1... [more]
KPYR_RAT5.599e-1737.16Pyruvate kinase isozymes R/L OS=Rattus norvegicus ... [more]

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Properties
Property NameValue
Genbank descriptionC32006F09EF RVDevelop1 Citrus clementina cDNA clone C32006F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920308 ID=FC920308; Name=FC920308; organism=Citrus clementina; type=EST; length=427bp
ATCTCATGAGTATCACCAGGAAACGCTTAATAATCTCAGAACTGCCATGG
TCAATACTGGGATTCTCTGCGCTGTTATGCTTGACACAAAGGGTCCAGAG
ATTCGAACTGGGTTCTTGAAAGATGGAAAGCCTATTCAGCTGAAACAAGG
TCAGGAAATTACCATATCTACTGATTACACCATAAAGGGTGACGAGAACA
TGATTTGCATGAGCTACAAAAAGTTGGCAGTGGATGTCCAGCCAGGGAGT
GTGATACTTTGTTCAGACGGCACAATCTCATTCACTGTTCTAGAATGTAA
TGTGAAAGCTGGTTTGGTTAAATGCCGCTGTGAGAACTCTGCTATGCTTG
GTGAAAGGAAAAATGTTAATCTCCCAGGGGTTATTGTGGATCTCCCCACC
TTGACAGAGAAAGACAGGAAGATATCT
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