FC920309
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920309 vs. ExPASy Swiss-Prot
Match: UBA1_SCHPO (Ubiquitin-activating enzyme E1 1 OS=Schizosaccharomyces pombe GN=ptr3 PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.583e-39 Identity = 84/214 (39.25%), Postives = 122/214 (57.01%), Query Frame = 1 Query: 67 RDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTNNPKMLAEAVDKVMVPDFLLKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPSGFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIP 708 R+ LE + + L EK F++CI WARL+F+ +F+N ++QL+F FP+D+ TSTG PFWS PKR P PL F + H F++AA+ L A +G+ +P + + P F K KI +E TA+ D + + L + GFRL P +FEKDDD+N+H+D I +N+RA NY I D+ K KF+AG+I+P Sbjct: 645 REVLENIRDYLVTEKPLSFEECIMWARLQFDKFFNNNIQQLLFNFPKDSVTSTGQPFWSGPKRAPTPLSFDIHNREHFDFIVAAASLYAFNYGLKS---ETDPAIYERVLAGYNPPPFAPKSGIKIQVNENEEAPETAANKDKQELKSIADSLPPPSSLV--GFRLTPAEFEKDDDSNHHIDFITAASNLRAMNYDITPADRFKTKFVAGKIVP 853
BLAST of FC920309 vs. ExPASy Swiss-Prot
Match: UBA1Y_MOUSE (Ubiquitin-like modifier-activating enzyme 1 Y OS=Mus musculus GN=Ube1ay PE=2 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.673e-36 Identity = 83/222 (37.39%), Postives = 132/222 (59.46%), Query Frame = 1 Query: 61 QARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTNNPKMLAEAVDKVMVPDFLLKKDAKI-LTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPS-----GFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIP 708 Q + LE + L ++ + + DC+TWA + +S+ ++QL+ FP TS+GA FWS PKR PHPL F +P HL +VMAA+ L A+T+G+ + + ++A+ + + VP F K +I +++++ + S ++DD+ LE+ + LP+ GF++ PI FEKDDD+N+HMD I +N+RA NY I D+ K+K IAG+IIP Sbjct: 682 QPLEVLEAIHCSLVLQRPQTWADCVTWAYQHWHTQYSHNIQQLLHNFPPAQLTSSGALFWSGPKRCPHPLTFDINNPLHLDYVMAAANLFAQTYGL---GGSQDCAVVAKLLQSLPVPKFAPKSGIRIHVSEQELQSTSATTIDDS--------HLEELKTALPTPDKLLGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYGISPADRHKSKLIAGKIIP 892
BLAST of FC920309 vs. ExPASy Swiss-Prot
Match: UBA6_MOUSE (Ubiquitin-like modifier-activating enzyme 6 OS=Mus musculus GN=Uba6 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.794e-28 Identity = 75/222 (33.78%), Postives = 119/222 (53.60%), Query Frame = 1 Query: 55 DAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTNNPKMLAEAVDKVMVPDFLLKKDAKIL-TDEKATTLSTASVDDAAVINDLIIKLEQC---RKNLPSGFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIP 708 + Q+ + +V++ L + I+ C+ ARLKFE YF+++ QL+ FP + G+ FW +PKR P P++F +P HL F+ +A+ L A + IP + + L + + +V + +F K K++ TDE A V N + +LE+ K S ++ + FEKDDD N H+D I +N+RA+ YSI D+ K K IAG+IIP Sbjct: 675 NGQSLEGCFQVIKLLSRRP-RIWSQCVELARLKFEKYFNHKALQLLHCFPLETRLKDGSLFWQSPKRPPSPIKFDLNEPLHLSFLQSAAKLYATVYCIPFSEKDLSVNSLMDILSEVKIEEF--KPSNKVVQTDETARKPDHVPVSSEDERN-AVFQLEEALSSNKATKSDLQMTVLSFEKDDDRNGHIDFITAASNLRAKMYSIEPADRFKTKRIAGKIIP 892
BLAST of FC920309 vs. ExPASy Swiss-Prot
Match: UBA7_HUMAN (Ubiquitin-like modifier-activating enzyme 7 OS=Homo sapiens GN=UBA7 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.268e-27 Identity = 77/226 (34.07%), Postives = 123/226 (54.42%), Query Frame = 1 Query: 34 TSMANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIP-IPDWTNNPKMLAEAVDKVMVPDFLLKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPSGFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIP 708 TS+A+ + Q L+ VL L + + + +QDC+ WA ++ F +KQL+ FP + G PFWS PK+ P PL+F + +HL +V+AA+ L A+ G+P DWT ++L L + D + + A+ L AS A + +L + + G LKP+ FEKDDD+N+H+D + A++R +NY IP V++ ++K I G+IIP Sbjct: 638 TSLADMDEPQTLTLLKPVLGVL-RVRPQNWQDCVAWALGHWKLCFHYGIKQLLRHFPPNKVLEDGTPFWSGPKQCPQPLEFDTNQDTHLLYVLAAANLYAQMHGLPGSQDWTALRELL----------KLLPQPDPQQMAPIFASNLELASA-SAEFGPEQQKELNKALEVWSVGPPLKPLMFEKDDDSNFHVDFVVAAASLRCQNYGIPPVNRAQSKRIVGQIIP 851
BLAST of FC920309 vs. ExPASy Swiss-Prot
Match: UBA6_HUMAN (Ubiquitin-like modifier-activating enzyme 6 OS=Homo sapiens GN=UBA6 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.277e-26 Identity = 71/200 (35.50%), Postives = 106/200 (53.00%), Query Frame = 1 Query: 121 FQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTNNPKMLAEAVDKVMVPDFLLKKDAKIL-TDEKATTLSTASVDDAAVINDLIIKLEQC---RKNLPSGFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIP 708 + C+ ARLKFE YF+++ QL+ FP D G+ FW +PKR P P++F +P HL F+ A+ L A + IP + + L + +V + +F K K++ TDE A + N I +LE+ + S ++ + FEKDDD N H+D I +N+RA+ YSI D+ K K IAG+IIP Sbjct: 696 WSQCVELARLKFEKYFNHKALQLLHCFPLDIRLKDGSLFWQSPKRPPSPIKFDLNEPLHLSFLQNAAKLYATVYCIPFAEEDLSADALLNILSEVKIQEF--KPSNKVVQTDETARKPDHVPISSEDERN-AIFQLEKAILSNEATKSDLQMAVLSFEKDDDHNGHIDFITAASNLRAKMYSIEPADRFKTKRIAGKIIP 892 The following BLAST results are available for this feature:
BLAST of FC920309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920309 ID=FC920309; Name=FC920309; organism=Citrus clementina; type=EST; length=708bpback to top |