FC920312

Overview
NameFC920312
Unique NameFC920312
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15382 contig Ccv1_Contig15382:10..733. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920312 vs. ExPASy Swiss-Prot
Match: ANXA4_HUMAN (Annexin A4 OS=Homo sapiens GN=ANXA4 PE=1 SV=4)

HSP 1 Score: 102.064 bits (253), Expect = 3.261e-21
Identity = 67/190 (35.26%), Postives = 109/190 (57.37%), Query Frame = 2
Query:   83 SAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAE-RDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLARTEAKIIRDKISDKDYAHEEL--IRILTTRSK 643
            +A EDA+ L KA +G GT+E  IISVLA+RN AQR+ IR  Y  T G DL+  L  ELS +FE+ V++  +TP    D      A K   +    L+EI  +R+  ++    Q Y  +Y +SLE+D+   TS  F+++LV L +  R +G  ++  L R +A+ + +   +K +  +E+  + +L +R++
Sbjct:   15 NAMEDAQTLRKAMKGLGTDEDAIISVLAYRNTAQRQEIRTAYKSTIGRDLIDDLKSELSGNFEQ-VIVGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRTPEEIRRISQTYQQQYGRSLEDDIRSDTSFMFQRVLVSLSAGGRDEGNYLDDALVRQDAQDLYE-AGEKKWGTDEVKFLTVLCSRNR 202          
BLAST of FC920312 vs. ExPASy Swiss-Prot
Match: ANXA3_BOVIN (Annexin A3 OS=Bos taurus GN=ANXA3 PE=2 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 3.261e-21
Identity = 67/191 (35.08%), Postives = 105/191 (54.97%), Query Frame = 2
Query:   95 DAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLARTEAKIIRDKISDKDYAHEE--LIRILTTRSKAQINAT 661
            DAE + KA +G GT+E  +IS+L  R  AQR LI + Y    G++L   L  +LS  F+  ++     PA  DA    ++ K + ++   L+EI  TR+S+ +     AY+  YKKSL ++++  TSGDFRK L+ L +  R +   V+  LAR +A+I+ +   +K +  +E     IL  RS  Q+  T
Sbjct:   23 DAEAIRKAIRGIGTDEKTLISILTERTNAQRLLIAKEYQALCGKELKDDLKGDLSGHFKHLMVALVTPPAVFDAKQLKKSMKGMGTNEDALIEILTTRTSKQMQEIGHAYYTAYKKSLGDEISSETSGDFRKALLILANGRRDESLKVDEQLARKDAQILYN-AGEKRWGTDEDAFTNILCLRSFPQLKLT 212          
BLAST of FC920312 vs. ExPASy Swiss-Prot
Match: ANXA4_CANFA (Annexin A4 OS=Canis familiaris GN=ANXA4 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.619e-20
Identity = 69/195 (35.38%), Postives = 108/195 (55.38%), Query Frame = 2
Query:   68 PTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAE-RDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLARTEAKIIRDKISDKDYAHEEL--IRILTTRSK 643
            P    SA EDA+ L KA +G GT+E  IISVLA RN +QR+ IR  Y  T G DL+  L  ELS +FER V++  +TP    D      A K   +    L+EI  +R+  +L    Q Y  +Y +SLE+ +   TS  F+++LV L +  R +G  ++  L R +A+ + +   +K +  +E+  + +L +R++
Sbjct:   10 PASGFSATEDAQTLRKAMKGLGTDEDAIISVLAPRNTSQRQEIRTAYKSTIGRDLMDDLKSELSGNFER-VIVGMITPTVLYDVQELRRAMKGSGTDEGCLIEILASRTPEELRCINQTYQLQYGRSLEDVIRSDTSFMFQRVLVSLSAGGRDEGNFLDDALMRQDAQDLYE-AGEKKWGTDEVKFLTVLCSRNR 202          
BLAST of FC920312 vs. ExPASy Swiss-Prot
Match: ANXA8_RABIT (Annexin A8 OS=Oryctolagus cuniculus GN=ANXA8 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.114e-20
Identity = 70/186 (37.63%), Postives = 100/186 (53.76%), Query Frame = 2
Query:   95 DAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYD-GGDVNMMLARTEAKII---RDKISDKDYAHEELIRILTTRS 640
            DAE L+KA +G GTNE  II VL  R++AQR+ I + +   +G DL + L  ELS  FER ++     P   +A   ++A K L +   V++EI  +R+   L    +AY   Y  SLEED+   TSG   ++LV L+   R D  G V+  LA  +A+ +    +KI   D    + I IL TRS
Sbjct:   26 DAETLYKAMKGIGTNEQAIIDVLTRRSSAQRQQIAKSFKAQFGSDLTETLKSELSGKFERLIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLQEIMKAYEEDYGSSLEEDIQADTSGYLERILVCLLQGSRDDVTGFVDPGLALQDAQDLYAAGEKICGTD--EMKFITILCTRS 209          
BLAST of FC920312 vs. ExPASy Swiss-Prot
Match: ANXA4_BOVIN (Annexin A4 OS=Bos taurus GN=ANXA4 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.114e-20
Identity = 66/190 (34.74%), Postives = 110/190 (57.89%), Query Frame = 2
Query:   83 SAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAE-RDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLARTEAKIIRDKISDKDYAHEEL--IRILTTRSK 643
            +AAEDA+ L KA +G GT+E  II+VLA+R+ AQR+ IR  Y  T G DL+  L  ELS +FE+ V+L  +TP    D     +A K   +    L+EI  +R+  ++    Q Y  +Y +SLE+D+   TS  F+++LV L +  R +   ++  L R +A+ + +   +K +  +E+  + +L +R++
Sbjct:   15 NAAEDAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDDLKSELSGNFEQ-VILGMMTPTVLYDVQELRKAMKGAGTDEGCLIEILASRTPEEIRRINQTYQLQYGRSLEDDIRSDTSFMFQRVLVSLSAGGRDESNYLDDALMRQDAQDLYE-AGEKKWGTDEVKFLTVLCSRNR 202          
BLAST of FC920312 vs. ExPASy Swiss-Prot
Match: ANXA8_BOVIN (Annexin A8 OS=Bos taurus GN=ANXA8 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.150e-20
Identity = 68/190 (35.79%), Postives = 101/190 (53.16%), Query Frame = 2
Query:   95 DAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYD-GGDVNMMLARTEAKII---RDKISDKDYAHEELIRILTTRSKAQI 652
            DAE L+KA +G GTNE  II VL  R+ AQR+ I + +   +G+DL++ L  ELS  FER ++     P   +A    +A K + +   V++EI  +R+   L    +AY   Y  +LEED+   TSG   ++LV L+   R D  G V+  LA  +A+ +    +KI   D    + I IL TRS   +
Sbjct:   26 DAETLYKAMKGIGTNEQAIIDVLTKRSNAQRQQIAKSFKAQFGKDLIETLKSELSGKFERLIIALMYPPYRYEAKELYDAMKGIGTKEGVIIEILASRTKNQLQEIMKAYEEDYGSNLEEDIKADTSGYLERILVCLLQGSRDDLSGYVDPGLALQDAQDLYAAGEKICGTD--EMKFITILCTRSATHL 213          
BLAST of FC920312 vs. ExPASy Swiss-Prot
Match: ANX12_HYDAT (Annexin-B12 OS=Hydra attenuata GN=ANXB12 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.150e-20
Identity = 66/197 (33.50%), Postives = 103/197 (52.28%), Query Frame = 2
Query:   68 PTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLARTEAKIIRDKISDKDYAHEELIR-ILTTRSKAQIN 655
            P  + ++ EDAE L KA +G GT+E  I  +LA R+ AQR+ I+  Y   +G+ L   L  ELS ++E + L     P E  A   + A K L +    L++I CT+S+  + A K A+   YK+ LE+++   TSG+F++LLV ++   R +   VN   A  +A  I      +    E     +L TRS  Q++
Sbjct:    9 PHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDENALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLH 205          

HSP 2 Score: 74.7146 bits (182), Expect = 5.576e-13
Identity = 51/150 (34.00%), Postives = 81/150 (54.00%), Query Frame = 2
Query:   68 PTQTPSAAEDAEQLHKAFQGW-GTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLA---NEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPL 505
            P     AAEDA  +++A +G  GT+E+   +VLA R+  Q   I   Y++   + +L+A++ E S D +  +L    +   R AY A   + A K L +S+  L+ I  +RS  DL   K+ + A Y KSL E +A   SGD++ LL+ +
Sbjct:  164 PVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQI 313          
BLAST of FC920312 vs. ExPASy Swiss-Prot
Match: ANXA1_CAVCU (Annexin A1 OS=Cavia cutleri GN=ANXA1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.033e-20
Identity = 70/200 (35.00%), Postives = 102/200 (51.00%), Query Frame = 2
Query:   68 PTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLARTEAKII-----RDKISDKDYAHEELIRILTTRSKAQI 652
            P  +  A+ D   LHKA    G +EA II +L  RN AQR+ I+  Y +  G+ L +AL K L+   E  VL    TPA+ DA     A K L +    L+EI  +R +R++    + Y    K+ L +D+   TSGDF+K L+ L    R +   VN  LA ++A+ +     R K +D +      I ILTTRS + +
Sbjct:   38 PYPSFDASSDVAALHKAITVKGVDEATIIDILTKRNNAQRQQIKAAYLQEKGKPLDEALKKALTGHLEEVVLALLKTPAQLDADELRAAMKGLGTDEDTLIEILVSRKNREIKEINRVYRDELKRDLAKDITSDTSGDFQKALLSLAKGDRCEDLSVNDDLADSDARALYEAGERRKGTDVNV----FITILTTRSYSHL 233          
BLAST of FC920312 vs. ExPASy Swiss-Prot
Match: ANXB9_DROME (Annexin-B9 OS=Drosophila melanogaster GN=AnnIX PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.049e-19
Identity = 71/214 (33.18%), Postives = 102/214 (47.66%), Query Frame = 2
Query:   68 PTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAER-DAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLARTEAKIIRDKISDKDYAHEELIR-ILTTRSKAQINATLKSLHDAFGNAITR 703
            P       EDA  L KA +G+GT+E  II +LA R   QR  I E +  +YG+DL+  L  EL   FE  V+L  +TP  +  A   ++A   L +    ++EI CT S+  +    Q Y   + KSLE D+   TSG F++L V LV   R +   V+   A  +A+ + D    +    E     IL TRS  Q+        +  GN I +
Sbjct:   17 PADPFDPVEDAAILRKAMKGFGTDEKAIIEILARRGIVQRLEIAEAFKTSYGKDLISDLKSELGGKFE-DVILALMTPLPQFYAQELHDAISGLGTDEEAIIEILCTLSNYGIKTIAQFYEQSFGKSLESDLKGDTSGHFKRLCVSLVQGNRDENQGVDEAAAIADAQALHDAGEGQWGTDESTFNSILITRSYQQLRQIFLEYENLSGNDIEK 229          
BLAST of FC920312 vs. ExPASy Swiss-Prot
Match: ANXA8_RAT (Annexin A8 OS=Rattus norvegicus GN=Anxa8 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19
Identity = 68/190 (35.79%), Postives = 100/190 (52.63%), Query Frame = 2
Query:   95 DAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYD-GGDVNMMLARTEAKIIR---DKISDKDYAHEELIRILTTRSKAQI 652
            DAE L+KA +G GTNE  II VL  R+  QR+ I + +   +G+DL + L  ELS  FER ++     P   +A   ++A K L +   V++EI  +R+   L    +AY   Y  +LEED+   TSG   ++LV L+   R D  G V+  LA  +A+ +    +KI   D    + I IL TRS   +
Sbjct:   26 DAETLYKAMKGIGTNEQAIIDVLTKRSNVQRQQIAKSFKAQFGKDLTETLKSELSGKFERLIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEEDYGSTLEEDIQGDTSGYLERILVCLLQGCRDDVSGFVDPGLALQDAQDLHAAGEKILGTD--EMKFITILCTRSATHL 213          
The following BLAST results are available for this feature:
BLAST of FC920312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ANXA4_HUMAN3.261e-2135.26Annexin A4 OS=Homo sapiens GN=ANXA4 PE=1 SV=4[more]
ANXA3_BOVIN3.261e-2135.08Annexin A3 OS=Bos taurus GN=ANXA3 PE=2 SV=3[more]
ANXA4_CANFA1.619e-2035.38Annexin A4 OS=Canis familiaris GN=ANXA4 PE=1 SV=2[more]
ANXA8_RABIT2.114e-2037.63Annexin A8 OS=Oryctolagus cuniculus GN=ANXA8 PE=2 ... [more]
ANXA4_BOVIN2.114e-2034.74Annexin A4 OS=Bos taurus GN=ANXA4 PE=1 SV=2[more]
ANXA8_BOVIN6.150e-2035.79Annexin A8 OS=Bos taurus GN=ANXA8 PE=2 SV=1[more]
ANX12_HYDAT6.150e-2033.50Annexin-B12 OS=Hydra attenuata GN=ANXB12 PE=1 SV=1[more]
ANXA1_CAVCU8.033e-2035.00Annexin A1 OS=Cavia cutleri GN=ANXA1 PE=1 SV=1[more]
ANXB9_DROME1.049e-1933.18Annexin-B9 OS=Drosophila melanogaster GN=AnnIX PE=... [more]
ANXA8_RAT1.370e-1935.79Annexin A8 OS=Rattus norvegicus GN=Anxa8 PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32006G02EF RVDevelop1 Citrus clementina cDNA clone C32006G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920312 ID=FC920312; Name=FC920312; organism=Citrus clementina; type=EST; length=724bp
GACTGCCTCGTCATTTTCTATTTTACAAAAACGCTGAAACAAATCGACAA
TGGCGACCCTTAAAGTGCCAACCCAGACCCCTTCTGCTGCTGAGGATGCT
GAGCAACTCCACAAAGCCTTCCAAGGATGGGGCACGAATGAGGCCCTCAT
TATATCTGTCTTGGCTCACAGAAATGCAGCTCAGCGCAAGTTGATTCGAG
AAATCTACAACGAAACTTATGGGGAAGACCTTCTTAAAGCACTGGACAAA
GAACTTTCAAGTGACTTTGAGAGATCTGTACTGCTATGGACATTGACTCC
TGCTGAGCGTGATGCTTATTTGGCAAATGAAGCGACAAAGAGATTGACTT
CAAGCAACTGGGTTCTCATGGAAATTGCCTGTACTAGATCTTCAAGAGAC
CTATTTGCTGCAAAGCAGGCCTACCATGCTCGTTACAAGAAATCCCTAGA
GGAAGATGTTGCATATCACACATCTGGGGACTTCCGCAAGCTTTTGGTTC
CTCTTGTGAGCACATTTCGATATGATGGAGGAGATGTGAACATGATGTTG
GCAAGAACTGAGGCTAAGATTATCCGTGACAAGATTTCAGACAAGGATTA
TGCTCATGAGGAGCTTATCAGGATTCTGACTACNAGGAGCAAGGCACAGA
TAAATGCGACCCTCAAATCACTACATGATGCTTTTGGAAATGCCATCACN
AGGATTTGAAGGCTGATCCCATGA
back to top