FC920312

Overview
NameFC920312
Unique NameFC920312
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920312 vs. ExPASy Swiss-Prot
Match: ANXA2_RAT (Annexin A2 OS=Rattus norvegicus GN=Anxa2 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 61/187 (32.62%), Postives = 95/187 (50.80%), Query Frame = 2
Query:   86 AAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFR-YDGGDVNMMLARTEAKIIRDK-ISDKDYAHEELIRILTTRS 640
            A  DA  +  A +  G +E  I+++L +R+ AQR+ I   Y     ++L  A+   LS   E  +L    TPA+ DA     + K L +    L+EI C+R++++L    + Y   YK  LE+D+   TSG+FRKLLV L    R  DG  ++  L   +A+ + D  +  K     + I I+T RS
Sbjct:   35 AERDALNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRTKKELPSAMKSALSGHLETVMLGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGEFRKLLVALAKGKRAEDGSVIDYELIDQDARELYDAGVKRKGTDVPKWISIMTERS 221          
BLAST of FC920312 vs. ExPASy Swiss-Prot
Match: ANX10_DROME (Annexin-B10 OS=Drosophila melanogaster GN=AnnX PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.190e-16
Identity = 62/207 (29.95%), Postives = 102/207 (49.28%), Query Frame = 2
Query:   86 AAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGD--VNMMLARTEAKIIRDKISDKDYAHEELI-RILTTRSKAQINATLKSLHDAFGNAI 697
            A++DA+ L  A +G+GT+E  II VL  R+  QR+ I+ +Y   +  DL+  L  EL   FE  ++   + P E      + A   + +    L+EI CT+++ ++      Y  RY++ L E +   TSG FR+LL  +V+  R DG D  V++  A+ +A  +      K    EE+  RI++  S  Q+    +      G  I
Sbjct:   17 ASQDAQVLRAAMKGFGTDEQEIIDVLVGRSNQQRQTIKAVYEAEFERDLVDDLKDELGGKFEDVIVGLMMPPVEYLCKQLHAAMAGIGTEEATLVEILCTKTNEEMAQIVAVYEERYQRPLAEQMCSETSGFFRRLLTLIVTGVR-DGLDTPVDVGQAKEQAAQLYSAGEAKLGTDEEVFNRIMSHASFPQLRLVFEEYKVLSGQTI 222          
BLAST of FC920312 vs. ExPASy Swiss-Prot
Match: ANX2B_XENLA (Annexin A2-B OS=Xenopus laevis GN=anxa2-B PE=2 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 3.492e-15
Identity = 53/166 (31.93%), Postives = 88/166 (53.01%), Query Frame = 2
Query:   41 KSTMATLKVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDV 538
            +S + ++K  T    A +DA  +  A +  G +E  II++L +R+  QR+ I   ++    +DL  AL   LS + E  +L    T  + DA     + K L +    L+EI C+R++++L   + AY   +K  LE+D+   TSGDFRKL+V L    R + G++
Sbjct:   22 QSKLGSVKAATHF-DAEKDAAAIETAIKTKGVDELTIINILTNRSNEQRQDIAFAFHRRTKKDLPSALKGALSGNLETVMLGLIKTRPQYDASELKASMKGLGTDEDTLIEIICSRTNKELLDIQNAYRELFKTELEKDIMSDTSGDFRKLMVALAKGRRQEDGNM 186          
BLAST of FC920312 vs. ExPASy Swiss-Prot
Match: ANXA1_RODSP (Annexin A1 OS=Rodentia sp. GN=ANXA1 PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 6.586e-14
Identity = 54/192 (28.12%), Postives = 87/192 (45.31%), Query Frame = 2
Query:   68 PTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLARTEAKIIRDKISDKDYAHEELIRILTTRSK 643
            P+  PS+  D   LHK     G +EA I+ +L  R  AQR  ++ +Y +  GE L + L K L+   +  +L    TPA+ D      A K + +    L+EI  TRS++ +      Y    KK + +     TSG+FR  L+ L    R +   VN  +A T+A+ +      ++     +   + T  K
Sbjct:   40 PSFDPSS--DVAALHKGIMVNGVDEATILDLLTKRYNAQRHHLKAVYIQETGEPLDETLKKALTGHIQELLLAMIKTPAQFDGNELRAAMKAVGTDEETLIEILWTRSNQQIREITSVYREELKKDIAKYQTSDTSGEFRDALLALAKGNRCEDMSVNQDIADTDARALYQAAERRNGTDVNVFNTILTTKK 229          
BLAST of FC920312 vs. ExPASy Swiss-Prot
Match: ANXA9_MOUSE (Annexin A9 OS=Mus musculus GN=Anxa9 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.511e-13
Identity = 53/166 (31.93%), Postives = 81/166 (48.80%), Query Frame = 2
Query:    8 SSFSILQKR*NKSTMATLKVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPL 505
            SS  +  K     T+ TL+      S  +D ++L KA  G G +   I+ VL +R+  QR+LI   + E   +DLLK+L   LS + E+ V+      A+ DA     A K   S+  V +EI  TR++  L A    Y   ++   EED+   T+G  + LL+ L
Sbjct:   18 SSLGLADKTAAWGTLGTLRTFLSF-SVDKDVQRLLKAIAGQGVDYDTIVDVLTNRSREQRQLISRAFQERTKQDLLKSLQAALSGNLEKIVVALLQPAAQFDAQELRTALKTSGSAEDVALEILATRAAPGLQACLAVYKHDFQVEAEEDIRTETNGILQDLLLAL 182          
The following BLAST results are available for this feature:
BLAST of FC920312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ANXA2_RAT4.125e-1632.62Annexin A2 OS=Rattus norvegicus GN=Anxa2 PE=1 SV=2[more]
ANX10_DROME9.190e-1629.95Annexin-B10 OS=Drosophila melanogaster GN=AnnX PE=... [more]
ANX2B_XENLA3.492e-1531.93Annexin A2-B OS=Xenopus laevis GN=anxa2-B PE=2 SV=... [more]
ANXA1_RODSP6.586e-1428.13Annexin A1 OS=Rodentia sp. GN=ANXA1 PE=2 SV=3[more]
ANXA9_MOUSE9.511e-1331.93Annexin A9 OS=Mus musculus GN=Anxa9 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC32006G02EF RVDevelop1 Citrus clementina cDNA clone C32006G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920312 ID=FC920312; Name=FC920312; organism=Citrus clementina; type=EST; length=724bp
GACTGCCTCGTCATTTTCTATTTTACAAAAACGCTGAAACAAATCGACAA
TGGCGACCCTTAAAGTGCCAACCCAGACCCCTTCTGCTGCTGAGGATGCT
GAGCAACTCCACAAAGCCTTCCAAGGATGGGGCACGAATGAGGCCCTCAT
TATATCTGTCTTGGCTCACAGAAATGCAGCTCAGCGCAAGTTGATTCGAG
AAATCTACAACGAAACTTATGGGGAAGACCTTCTTAAAGCACTGGACAAA
GAACTTTCAAGTGACTTTGAGAGATCTGTACTGCTATGGACATTGACTCC
TGCTGAGCGTGATGCTTATTTGGCAAATGAAGCGACAAAGAGATTGACTT
CAAGCAACTGGGTTCTCATGGAAATTGCCTGTACTAGATCTTCAAGAGAC
CTATTTGCTGCAAAGCAGGCCTACCATGCTCGTTACAAGAAATCCCTAGA
GGAAGATGTTGCATATCACACATCTGGGGACTTCCGCAAGCTTTTGGTTC
CTCTTGTGAGCACATTTCGATATGATGGAGGAGATGTGAACATGATGTTG
GCAAGAACTGAGGCTAAGATTATCCGTGACAAGATTTCAGACAAGGATTA
TGCTCATGAGGAGCTTATCAGGATTCTGACTACNAGGAGCAAGGCACAGA
TAAATGCGACCCTCAAATCACTACATGATGCTTTTGGAAATGCCATCACN
AGGATTTGAAGGCTGATCCCATGA
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