FC920315

Overview
NameFC920315
Unique NameFC920315
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 351.673 bits (901), Expect = 2.261e-96
Identity = 173/206 (83.98%), Postives = 189/206 (91.75%), Query Frame = 1
Query:   88 DVKLGANKFSERQPIGTSAQSD-KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            DV +GANKF ERQPIGT+AQ++ KDYKEPPPAP FEPGELKSWSFYRAGIAEF+ATFLFLY+TVLTVMGV ++   C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FY+VMQCLGAICGAGVVKGF+    Y+  GGGANVVAHGYTKG GLGAEI+GTFVLVYTVFSATDAKR+ARDSHVP L
Sbjct:    7 DVNVGANKFPERQPIGTAAQTESKDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGL-YQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPIL 211          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 350.517 bits (898), Expect = 5.037e-96
Identity = 173/208 (83.17%), Postives = 186/208 (89.42%), Query Frame = 1
Query:   88 DVKLGANKFSERQPIGTSAQSD---KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            DV LGANKF ERQP+G +AQS    KDY+EPPPAPLFEP EL SWSFYRAGIAEF+ATFLFLYITVLTVMGV + ++KC TVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FYMVMQ LGAICGAGVVKGFEG + +  L GGAN VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVP L
Sbjct:    7 DVSLGANKFPERQPLGIAAQSQDEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPIL 214          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 5.569e-95
Identity = 173/207 (83.57%), Postives = 189/207 (91.30%), Query Frame = 1
Query:   88 DVKLGANKFSERQPIGTSAQS--DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            DV+LGAN++SERQPIGT+AQ   +KDYKEPPPAPLFE  EL SWSFYRAGIAEF+ATFLFLYI++LTVMGVSKS++KC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FYMVMQCLGAICGAGVVKGF+    Y   GGGAN V  GYTKGDGLGAEI+GTFVLVYTVFSATDAKR+ARDSHVP L
Sbjct:    7 DVRLGANRYSERQPIGTAAQGTEEKDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGL-YMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPIL 212          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 338.961 bits (868), Expect = 1.517e-92
Identity = 169/207 (81.64%), Postives = 186/207 (89.86%), Query Frame = 1
Query:   88 DVKLGANKFSERQPIGTSAQS--DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            DV+LGAN+++ERQPIGT+AQ   +KDY+EPP AP+FE  EL SWSFYRAGIAEF+ATFLFLYI++LTVMGV+KS +KC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRAVFYM MQCLGAICGAGVVKGF+    Y   GGGAN V  GYTKGDGLGAEI+GTFVLVYTVFSATDAKRNARDSHVP L
Sbjct:    7 DVRLGANRYTERQPIGTAAQGAEEKDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVNKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGL-YMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPIL 212          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 2.587e-92
Identity = 167/206 (81.07%), Postives = 183/206 (88.83%), Query Frame = 1
Query:   88 DVKLGANKFSERQPIGTSAQS-DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            DV++G ++F ERQPIGT+A    +DY EPP APLFE  EL SWSFYRAGIAEF+ATFLFLY+TVLTVMGVSKS +KC TVGIQGIAWAFGGMIFALVYCTAG+SGGHINPAVTFGLLLARKLSLTRAV+Y+VMQCLGA+CGAGVVK F GS  YE  GGGAN V+ GYTKGDGLGAE++GTFVLVYTVFSATDAKR ARDSHVP L
Sbjct:   14 DVRVGVDRFPERQPIGTAADDLGRDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAF-GSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPAL 218          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 4.412e-92
Identity = 171/207 (82.61%), Postives = 184/207 (88.89%), Query Frame = 1
Query:   88 DVKLGANKFSERQPIGTSAQS--DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            DV+LGANKFSER  IGT+AQ   DKDYKEPPPAPLFEPGELKSWSFYR GIAEF+ATFLFLYI++LTVMGVSKS +KC+TVGIQGIAW+FGGMI ALVYCTAGIS GHINPAVTFGL LARKLSLTRAVFY++MQCLGAICG GVVKGF+    Y   GG  NVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR ARDSHVP L
Sbjct:    7 DVRLGANKFSERHAIGTAAQGTDDKDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTAGIS-GHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGL-YMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVPIL 211          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.743e-72
Identity = 136/192 (70.83%), Postives = 149/192 (77.60%), Query Frame = 1
Query:  148 SDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKS-------NTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            S KDY +PPPAPL +P EL  WS YRA IAEF+AT LFLYITVLT++G  +        NT+C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL L RK+SL RA+ YM+ QC GAICGAG+ KGF+ S  Y R GGG N V+ GY KG  LGAEIIGTFVLVYTVFSATD KRNARDSHVP L
Sbjct:   15 SAKDYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQKS-FYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVL 205          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 2.277e-72
Identity = 135/183 (73.77%), Postives = 148/183 (80.87%), Query Frame = 1
Query:  154 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            KDY +PPPAPL + GELKSWSFYRA IAEF+AT LFLY+TV TV+G  K    C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ YM+ QCLGAICG G VK F  +  Y  LGGGAN VA GY+KG  LGAEIIGTFVLVYTVFSATD KR+ARDSH+P L
Sbjct:   15 KDYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTP-YNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVL 196          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.476e-71
Identity = 137/193 (70.98%), Postives = 153/193 (79.27%), Query Frame = 1
Query:  148 SDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            S KDY +PPPAPL +  EL  WS YRA IAEF+AT LFLYITV TV+G        V+ ++  CS VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RAV Y++ QCLGAICG G+VKGF+ S  Y R GGGAN ++ GY+KG GLGAEIIGTFVLVYTVFSATD KRNARDSH+P L
Sbjct:   16 SAKDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQ-SSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVL 207          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.517e-71
Identity = 135/191 (70.68%), Postives = 149/191 (78.01%), Query Frame = 1
Query:  130 IGTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            +    +  KDY +PPPAPL +  ELK WSFYRA IAEF+AT LFLY+TV TV+G       C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RAV YMV QCLGAICG G+VK F  +  Y+RLGGGAN VA GY+ G  LGAEIIGTFVLVYTVFSATD KR+ARDSHVP L
Sbjct:    5 VSEEGRHGKDYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQTGPCGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTP-YKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVL 194          
The following BLAST results are available for this feature:
BLAST of FC920315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
PIP15_ARATH2.261e-9683.98Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP2_PEA5.037e-9683.17Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP15_MAIZE5.569e-9583.57Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP13_ORYSJ1.517e-9281.64Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP16_MAIZE2.587e-9281.07Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP11_MAIZE4.412e-9282.61Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP27_MAIZE1.743e-7270.83Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP27_ARATH2.277e-7273.77Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP22_ORYSJ1.476e-7170.98Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP28_ARATH2.517e-7170.68Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC32006G05EF RVDevelop1 Citrus clementina cDNA clone C32006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920315 ID=FC920315; Name=FC920315; organism=Citrus clementina; type=EST; length=703bp
CATACACAACACAAACACAGCATCTTCTTTGAGAGAATAAGAGAGCGAGA
GAGAGGTTCATCATCGTCAATGGAAGGCAAAGAAGAGGATGTTAAGCTAG
GAGCTAACAAGTTCTCAGAGAGGCAACCCATTGGGACATCAGCTCAATCA
GACAAAGACTACAAGGAGCCACCACCAGCACCTTTGTTTGAGCCTGGTGA
GCTCAAGTCATGGTCTTTTTACAGAGCTGGTATTGCAGAGTTCATGGCTA
CCTTCTTGTTCCTCTACATCACTGTCTTGACTGTCATGGGTGTCTCTAAG
TCTAACACCAAGTGCTCCACTGTCGGTATCCAAGGAATTGCTTGGGCCTT
TGGTGGCATGATCTTTGCCCTTGTTTACTGCACTGCTGGTATCTCAGGAG
GACACATCAACCCAGCAGTGACCTTCGGTCTGCTGCTAGCGAGGAAGCTT
TCCCTGACAAGAGCTGTCTTCTACATGGTCATGCAGTGCCTTGGTGCCAT
CTGTGGTGCTGGTGTTGTCAAGGGATTCGAAGGTTCAAAGAACTACGAGA
GGTTGGGTGGTGGAGCCAATGTTGTTGCTCACGGCTACACCAAGGGTGAT
GGTCTTGGTGCTGAGATTATTGGAACCTTTGTTCTTGTTTACACTGTCTT
CTCTGCCACTGATGCCAAGAGAAACGCCAGAGATTCTCATGTCCCCTATT
TGG
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