FC920315

Overview
NameFC920315
Unique NameFC920315
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.294e-71
Identity = 132/190 (69.47%), Postives = 148/190 (77.89%), Query Frame = 1
Query:  133 GTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            G   Q  KDY +PPPAP F+ GELK WSF+RA IAEF+AT LFLYITV TV+G  K    C++VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ YM+ QC GAICG G+VK F     Y + GGGAN VA GY KG   GAE+IGTFVLVYTVFSATD KR+ARDSHVP L
Sbjct:   10 GQVHQHGKDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDPCASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGP-YNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATDPKRSARDSHVPIL 198          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 1.632e-70
Identity = 138/196 (70.41%), Postives = 150/196 (76.53%), Query Frame = 1
Query:  133 GTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVS-KSNTK-----CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            G      +DY++PPP P F+  EL  WS YRA IAEF+AT LFLYITVLTV+G   +S+TK     C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RAV YMV QCLGAICG G VK F+ S  Y+R GGGAN +A GY  G GL AEIIGTFVLVYTVFSATD KRNARDSHVP L
Sbjct:    7 GPEGFQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQ-SSYYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVL 201          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 265.388 bits (677), Expect = 2.131e-70
Identity = 134/191 (70.16%), Postives = 151/191 (79.06%), Query Frame = 1
Query:  154 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            KDY +PPPAPL +  EL SWS YRA IAEF+AT LFLYITV TV+G         S ++  C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ Y+V QCLGAICG G+VK F+ S  ++R GGGAN +A GY++G GLGAEIIGTFVLVYTVFSATD KRNARDSHVP L
Sbjct:   19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQ-SAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVL 208          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 4.747e-70
Identity = 134/191 (70.16%), Postives = 149/191 (78.01%), Query Frame = 1
Query:  154 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            KDY +PPPAPL +  EL SWS YRA IAEF+AT LFLYITV TV+G         S ++  C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ Y+V QCLGAICG G+VK F+ S  + R GGGAN +A GY+KG GL AEIIGTFVLVYTVFSATD KRNARDSHVP L
Sbjct:   19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQ-SAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVL 208          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 263.077 bits (671), Expect = 1.058e-69
Identity = 135/185 (72.97%), Postives = 147/185 (79.46%), Query Frame = 1
Query:  154 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            KDY +PPPAPLF+ GEL+ WSFYRA IAEF+AT LFLYITV TV+G  V  S  +C  VG  GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLLLARK+S+ RAV Y+V QCLG I G G+VKG      Y   GGGAN+VA GY+ G  LGAEIIGTFVLVYTVFSATD KRNARDSHVP L
Sbjct:   15 KDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIM-KHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVL 198          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.058e-69
Identity = 136/196 (69.39%), Postives = 149/196 (76.02%), Query Frame = 1
Query:  133 GTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVS-KSNTK-----CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            G      +DY++PPP P F+  EL  WS YRA IAEF+AT LFLY+TVLTV+G   +S+TK     C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RAV YMV QCLGAICG G VK F+ S +Y   GGGAN +A GY  G GL AEIIGTFVLVYTVFSATD KRNARDSHVP L
Sbjct:    7 GPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQ-SSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVL 201          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.381e-69
Identity = 134/196 (68.37%), Postives = 150/196 (76.53%), Query Frame = 1
Query:  139 SAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            +A   KDY +PPPAPL +  EL  WS YRA IAEF+AT LFLYITV TV+G         S  +  C  VG+ GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGL LARK+SL RA+ Y+V QCLGAICG G+VKGF+ S  Y R GGGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KRNARDSHVP L
Sbjct:    9 AAHEGKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQ-SAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVL 203          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.381e-69
Identity = 131/193 (67.88%), Postives = 150/193 (77.72%), Query Frame = 1
Query:  154 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK----------SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            KDY +PPPAPL +  EL SWS YRA IAEF+AT LFLY+TV TV+G             ++  C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ YMV QCLGA+CG G+VK F+ S  ++R GGGAN +A GY++G GLGAEI+GTFVLVYTVFSATD KRNARDSHVP L
Sbjct:   19 KDYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQ-SAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPVL 210          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.077e-69
Identity = 134/193 (69.43%), Postives = 149/193 (77.20%), Query Frame = 1
Query:  148 SDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            S KDY +PPPAPL +  EL  WS YRA IAEF+AT LFLYITV TV+G         S  +  C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ Y++ QCLGAICG G+VKGF+ S  Y R GGGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KR+ARDSHVP L
Sbjct:   17 SAKDYTDPPPAPLIDADELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQ-SAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVL 208          
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.019e-69
Identity = 134/193 (69.43%), Postives = 149/193 (77.20%), Query Frame = 1
Query:  148 SDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPYL 702
            S KDY +PPPAPL +  EL  WS YRA IAEF+AT LFLYITV TV+G         S  +  C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ Y++ QCLGAICG G+VKGF+ S  Y R GGGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KR+ARDSHVP L
Sbjct:   16 SAKDYTDPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQ-SAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVL 207          
The following BLAST results are available for this feature:
BLAST of FC920315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
PIP1_ATRCA4.294e-7169.47Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP22_ARATH1.632e-7070.41Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP21_MAIZE2.131e-7070.16Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP21_ORYSJ4.747e-7070.16Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP26_ORYSJ1.058e-6972.97Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP23_ARATH1.058e-6969.39Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP25_MAIZE1.381e-6968.37Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP22_MAIZE1.381e-6967.88Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP23_MAIZE3.077e-6969.43Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP24_MAIZE4.019e-6969.43Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32006G05EF RVDevelop1 Citrus clementina cDNA clone C32006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920315 ID=FC920315; Name=FC920315; organism=Citrus clementina; type=EST; length=703bp
CATACACAACACAAACACAGCATCTTCTTTGAGAGAATAAGAGAGCGAGA
GAGAGGTTCATCATCGTCAATGGAAGGCAAAGAAGAGGATGTTAAGCTAG
GAGCTAACAAGTTCTCAGAGAGGCAACCCATTGGGACATCAGCTCAATCA
GACAAAGACTACAAGGAGCCACCACCAGCACCTTTGTTTGAGCCTGGTGA
GCTCAAGTCATGGTCTTTTTACAGAGCTGGTATTGCAGAGTTCATGGCTA
CCTTCTTGTTCCTCTACATCACTGTCTTGACTGTCATGGGTGTCTCTAAG
TCTAACACCAAGTGCTCCACTGTCGGTATCCAAGGAATTGCTTGGGCCTT
TGGTGGCATGATCTTTGCCCTTGTTTACTGCACTGCTGGTATCTCAGGAG
GACACATCAACCCAGCAGTGACCTTCGGTCTGCTGCTAGCGAGGAAGCTT
TCCCTGACAAGAGCTGTCTTCTACATGGTCATGCAGTGCCTTGGTGCCAT
CTGTGGTGCTGGTGTTGTCAAGGGATTCGAAGGTTCAAAGAACTACGAGA
GGTTGGGTGGTGGAGCCAATGTTGTTGCTCACGGCTACACCAAGGGTGAT
GGTCTTGGTGCTGAGATTATTGGAACCTTTGTTCTTGTTTACACTGTCTT
CTCTGCCACTGATGCCAAGAGAAACGCCAGAGATTCTCATGTCCCCTATT
TGG
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