FC920315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 59/173 (34.10%), Postives = 91/173 (52.60%), Query Frame = 1 Query: 196 GELKSWSFYRAGIAEFMATFLFLYITVLTVM--GVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAH---GYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVP 696 G+ S + +A +AEF+AT LF++ V + + G + G+ IA A +F V A ISGGH+NPAVTFGL + +++ VFY V Q LGA A ++ GF + G + H G ++ +G+ E++ TF LVYTV+ +A D K+ + + P Sbjct: 10 GDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATV-ACLLLGF--------VTHGKAIPTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGSLGTIAP 173
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 56/163 (34.36%), Postives = 83/163 (50.92%), Query Frame = 1 Query: 193 PGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKR 672 PGEL +A +AEF++ +F++ + M SK T G+ + A +F V A ISGGH+NPAVTFG + +SL +AV Y V Q LG++ ++K G GA ++ G + + EI+ TF LVYTV+ +A D K+ Sbjct: 11 PGELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGG-----AAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKK 168
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 51/163 (31.29%), Postives = 82/163 (50.31%), Query Frame = 1 Query: 193 PGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKR 672 PGE RA AEF + +F++ + M K + + G+ + + +F V A +SGGH+NPAVTFG + ++L RA+ Y + Q LGA+ ++K G + A +++G T + + EI+ TF LVYTV+ +A D K+ Sbjct: 11 PGEASRPDAIRAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGG-----METAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK 168
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 54/163 (33.13%), Postives = 84/163 (51.53%), Query Frame = 1 Query: 193 PGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKR 672 PGEL +A +AEF++T +F++ + M SK + G+ + A +F V A ISGGH+NPAVTFG + +SL +A+ Y V Q LG++ ++K G GA ++ G + + E++ TF LVYTV+ +A D K+ Sbjct: 11 PGELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAAL-----GAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKK 168
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 52/161 (32.30%), Postives = 83/161 (51.55%), Query Frame = 1 Query: 223 RAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVP 696 RA +AEF++T +F++ + + +K +T G+ A A +F V A ISGGH+NPAVTFG+LL ++L R + Y + Q LG++ ++ G + G ++ G + L EI+ TF LVYTV+ +A D K + + P Sbjct: 22 RAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLLSFATGGEPIPAFG-----LSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAP 177
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.230e-14 Identity = 58/171 (33.92%), Postives = 89/171 (52.05%), Query Frame = 1 Query: 223 RAGIAEFMATFLFLYITVLTVMGVSK------SNTKCSTVG---IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVK---------GFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSA-TDAKRNA 678 RA +AEF++TF+F++ +++ + K ++ +T G + +A AF +FA V +SGGH+NPAVTFG L+ +++ RA++Y + Q LGAI +++ GF RL G V +GL EII TF LVY V+S D KR + Sbjct: 24 RATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFA--LFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPVGF-------RLASGVGAV-------NGLVLEIILTFGLVYVVYSTLIDPKRGS 178
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.404e-13 Identity = 50/159 (31.45%), Postives = 81/159 (50.94%), Query Frame = 1 Query: 223 RAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVP 696 RA ++EF+AT +F++ +V G+ K T+G + +A A + A V + SGGH+NPAVTFG+L+ R++S RA Y Q LGA+ +++ G + + H + L E++ TF LVYTV++ +R+ P Sbjct: 29 RAALSEFVATAVFVFAAEGSVYGLWKMYRDTGTLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGG-----MRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGDIAP 182
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.395e-13 Identity = 52/151 (34.44%), Postives = 78/151 (51.66%), Query Frame = 1 Query: 220 YRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 672 +R +AE + TF + I V + G S+ + I IA+ FG + L ISG HINPAVT G L+ ++S+ ++V Y+ +QC+GAI GA V+K S+ L G + + T G + E + TF+LV V +D R Sbjct: 23 WRQLMAELIGTFFLVVIGVGSCTGGSEWSPS-----IPQIAFTFGLTVATLAQAIGHISGCHINPAVTVGFLIVGEMSIIKSVLYIAVQCVGAIAGAAVIK-VGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDPGR 167
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.127e-13 Identity = 52/161 (32.30%), Postives = 82/161 (50.93%), Query Frame = 1 Query: 223 RAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVP 696 +A +AEF+AT LF++ V + + S+ G+ IA A +F V A ISGGH+NPAVTFGL + +++ + Y V Q LGA +++ + G G ++ +G+ EI+ TF LVYTV+ +A D K+ + + P Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHG------VSGISEIEGVVMEIVITFALVYTVYATAADPKKGSLGTIAP 173
BLAST of FC920315 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.085e-13 Identity = 58/175 (33.14%), Postives = 85/175 (48.57%), Query Frame = 1 Query: 193 PGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDG-LGA---EIIGTFVLVYTVF-SATDAKRNARDSHVP 696 P E +A +AEF++T +F+ + M +K +T G+ A A +F V A ISGGH+NPAVTFG + ++L R + Y + Q LG++ ++K GG V A G + G G L A EI+ TF LVYTV+ +A D K + + P Sbjct: 11 PDEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK---------FATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAP 176 The following BLAST results are available for this feature:
BLAST of FC920315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 126
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920315 ID=FC920315; Name=FC920315; organism=Citrus clementina; type=EST; length=703bpback to top |