FC920318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: HBS1L_BOVIN (HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.106e-51 Identity = 96/191 (50.26%), Postives = 133/191 (69.63%), Query Frame = 1 Query: 109 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPISG 681 K +N+VVIGHVD+GKST GHL+Y LG ++KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFET T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +LK+ G+ +V F+P SG Sbjct: 260 KQLLNLVVIGHVDAGKSTLMGHLLYLLGDVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSG 448
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EF1A_PYRCJ (Elongation factor 1-alpha OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=tuf PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.592e-51 Identity = 93/191 (48.69%), Postives = 129/191 (67.54%), Query Frame = 1 Query: 106 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678 +K HIN+ V+GHVD+GKST G L+Y+ G +D++ + E+ A +M K F +AW+LD+ K ERERG+TI+ FET K + T+ID PGHRDF+KNMI G SQAD A+ +I + G FE I GQ REH L TLG++Q++ NKMDA Y + RY+++ EVS LK +GY+P ++ FVP+S Sbjct: 14 QKPHINLAVVGHVDNGKSTLVGRLLYETGYVDEKAFKEIEEMAKKMGKEDFAFAWILDRFKEERERGVTIEATHVGFETQKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGIQQLVVAVNKMDAV--NYDQKRYEQVKAEVSKLLKLLGYDPSKIHFVPVS 202
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAE (Elongation factor 1-alpha OS=Pyrobaculum aerophilum GN=tuf PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.126e-51 Identity = 92/191 (48.17%), Postives = 130/191 (68.06%), Query Frame = 1 Query: 106 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678 +K HIN+ V+GHVD+GKST G L+Y+ G +D++ ++ E+ A ++ K F +AW+LD+ K ERERG+TI+ FET K + T+ID PGHRDF+KNMI G SQAD A+ +I + G FEA I GQ REH L TLGV+Q++ NKMD Y + RY+++ EVS LK +GY+P ++ F+P+S Sbjct: 14 QKPHINLAVVGHVDNGKSTLVGRLLYETGYVDEKALKEIEEMAKKIGKEDFAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFEAAIGPQGQGREHLFLIRTLGVQQIVVAVNKMDVV--NYDQKRYEQVKAEVSKLLKLLGYDPSKIHFIPVS 202
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EF1A_PYRIL (Elongation factor 1-alpha OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=tuf PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.045e-50 Identity = 94/191 (49.21%), Postives = 128/191 (67.02%), Query Frame = 1 Query: 106 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678 +K H+N+ VIGHVD+GKST G L+Y+ G +D++ + E+ A +M K F +AW+LD+ K ERERG+TI+ FET K + T+ID PGHRDFIKNMI G SQAD A+ +I + G FE I GQ REH L TLGV+Q++ NKMD Y + RY++I EVS LK +GY+P ++ F+P+S Sbjct: 14 QKPHLNLAVIGHVDNGKSTLVGRLLYETGYVDEKAFKEIEEMAKKMGKEDFAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFIKNMIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGVQQIVVAVNKMDIV--NYDQKRYEQIKAEVSKLLKLLGYDPSKIHFIPVS 202
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: ERF3A_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus GN=Gspt1 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.365e-50 Identity = 94/193 (48.70%), Postives = 135/193 (69.95%), Query Frame = 1 Query: 106 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP-REVPFVPISG 681 +K H+N+V IGHVD+GKST G ++Y G +DKR +E++E+EA E N+ ++ +W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G SQAD AVL+I + G FE G K GQTREHA+LA T GVK +I NKMD T +S RY+E +++ +LKKVG+NP +++ F+P SG Sbjct: 71 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSG 263
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: ERF3A_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens GN=GSPT1 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.365e-50 Identity = 94/193 (48.70%), Postives = 135/193 (69.95%), Query Frame = 1 Query: 106 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP-REVPFVPISG 681 +K H+N+V IGHVD+GKST G ++Y G +DKR +E++E+EA E N+ ++ +W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G SQAD AVL+I + G FE G K GQTREHA+LA T GVK +I NKMD T +S RY+E +++ +LKKVG+NP +++ F+P SG Sbjct: 71 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSG 263
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAR (Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=tuf PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.365e-50 Identity = 92/191 (48.17%), Postives = 128/191 (67.02%), Query Frame = 1 Query: 106 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678 +K HIN+ V+GHVD+GKST G L+Y+ G +D++ + E+ A +M K F +AW+LD+ K ERERG+TI+ FET K + T+ID PGHRDF+KNMI G SQAD A+ +I + G FE I GQ REH L TLG++Q++ NKMD Y + RY+++ EVS LK +GY+P ++ FVP+S Sbjct: 14 QKPHINLAVVGHVDNGKSTLVGRLLYETGYVDEKGFKEIEEMAKKMGKEDFAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGIQQLVVAVNKMDVV--NYDQKRYEQVKSEVSKLLKLLGYDPSKIHFVPVS 202
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EF1A_PYRFU (Elongation factor 1-alpha OS=Pyrococcus furiosus GN=tuf PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.040e-50 Identity = 105/196 (53.57%), Postives = 136/196 (69.39%), Query Frame = 1 Query: 97 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPISGF 684 M K+K H+NIV IGHVD GKSTT G L+Y G I +++I++FE E E K SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y++ R++E+ +V LK +GY ++ P +PIS + Sbjct: 1 MPKDKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPEQIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVAINKMDMV--NYNQKRFEEVKAQVEKLLKMLGY--KDFPVIPISAW 183
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EF1A_METJA (Elongation factor 1-alpha OS=Methanocaldococcus jannaschii GN=tuf PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.971e-50 Identity = 101/193 (52.33%), Postives = 133/193 (68.91%), Query Frame = 1 Query: 97 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV-GYNPREVPFVP 672 M K+K +N+ IGHVD+GKSTT G L+Y G ID +++E+ ++EA E K F++A+V+D LK ERERG+TID+A KFET KY T++D PGHRDFIKNMITG SQAD AVL++D +A QTREH LA TLG+KQ+ NKMD T YS+ Y+++ K +S L KV GYNP ++ F+P Sbjct: 1 MAKQKPVLNVAFIGHVDAGKSTTVGRLLYDSGAIDPQLLEKLKREAQERGKAGFEFAYVMDNLKEERERGVTIDVAHKKFETQKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVDVN----DAKTGIQPQTREHMFLARTLGIKQIAVAINKMD--TVNYSQEEYEKMKKMLSEQLLKVLGYNPDQIDFIP 187
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EF1A_PYRWO (Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.773e-50 Identity = 104/196 (53.06%), Postives = 136/196 (69.39%), Query Frame = 1 Query: 97 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPISGF 684 M K+K H+NIV IGHVD GKSTT G L+Y G I +++I++FE E E K SFK+AWV+D+L+ ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y++ R++E+ +V LK +GY ++ P +PIS + Sbjct: 3 MPKDKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPEQIIKKFE-EMGEKGK-SFKFAWVMDRLREERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVAINKMDMV--NYNQKRFEEVKAQVEKLLKMLGY--KDFPVIPISAW 185 The following BLAST results are available for this feature:
BLAST of FC920318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920318 ID=FC920318; Name=FC920318; organism=Citrus clementina; type=EST; length=686bpback to top |