FC920318

Overview
NameFC920318
Unique NameFC920318
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: CYSN_ECOLC (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=cysN PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21
Identity = 61/194 (31.44%), Postives = 102/194 (52.58%), Query Frame = 1 
Query:  103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N  ++ FVP+S
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEKTFTRIREDYLTFAGQLPGN-LDIRFVPLS 206
[Close]
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: CYSN_ECOL6 (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O6 GN=cysN PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21
Identity = 61/194 (31.44%), Postives = 102/194 (52.58%), Query Frame = 1 
Query:  103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N  ++ FVP+S
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGN-LDIRFVPLS 206
[Close]
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: CYSN_ECOL5 (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21
Identity = 61/194 (31.44%), Postives = 102/194 (52.58%), Query Frame = 1 
Query:  103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N  ++ FVP+S
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGN-LDIRFVPLS 206
[Close]
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: CYSN_ECOK1 (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O1:K1 / APEC GN=cysN PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21
Identity = 61/194 (31.44%), Postives = 102/194 (52.58%), Query Frame = 1 
Query:  103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N  ++ FVP+S
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGN-LDIRFVPLS 206
[Close]
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: CYSN_ECOHS (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O9:H4 (strain HS) GN=cysN PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21
Identity = 61/194 (31.44%), Postives = 102/194 (52.58%), Query Frame = 1 
Query:  103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N  ++ FVP+S
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGN-LDIRFVPLS 206
[Close]
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: CYSN_ECODH (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli (strain K12 / DH10B) GN=cysN PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21
Identity = 61/194 (31.44%), Postives = 102/194 (52.58%), Query Frame = 1 
Query:  103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N  ++ FVP+S
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGN-LDIRFVPLS 206
[Close]
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: CYSN_ECOBW (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli (strain K12 / BW2952) GN=cysN PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21
Identity = 61/194 (31.44%), Postives = 102/194 (52.58%), Query Frame = 1 
Query:  103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N  ++ FVP+S
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGN-LDIRFVPLS 206
[Close]
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: CYSN_ECO81 (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O81 (strain ED1a) GN=cysN PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21
Identity = 61/194 (31.44%), Postives = 102/194 (52.58%), Query Frame = 1 
Query:  103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N  ++ FVP+S
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGN-LDIRFVPLS 206
[Close]
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: CYSN_ECO7I (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21
Identity = 61/194 (31.44%), Postives = 102/194 (52.58%), Query Frame = 1 
Query:  103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N  ++ FVP+S
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGN-LDIRFVPLS 206
[Close]
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: CYSN_ECO5E (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21
Identity = 61/194 (31.44%), Postives = 102/194 (52.58%), Query Frame = 1 
Query:  103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N  ++ FVP+S
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGN-LDIRFVPLS 206
The following BLAST results are available for this feature:
BLAST of FC920318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_ECOLC8.628e-2131.44Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECOL68.628e-2131.44Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECOL58.628e-2131.44Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECOK18.628e-2131.44Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECOHS8.628e-2131.44Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECODH8.628e-2131.44Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECOBW8.628e-2131.44Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECO818.628e-2131.44Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECO7I8.628e-2131.44Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECO5E8.628e-2131.44Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]

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Properties
Property NameValue
Genbank descriptionC32006G08EF RVDevelop1 Citrus clementina cDNA clone C32006G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920318 ID=FC920318; Name=FC920318; organism=Citrus clementina; type=EST; length=686bp
GCTCTTTTCAATACACTCTCTCAATTTCCGAAGGGCGGCGAGAGAGAACC
ATTTTCGCGAATATCATTTTAATAAGGTTTTTTCTAGATTTGCCTAATGG
GTAAGGAGAAGACTCACATCAACATTGTGGTCATCGGCCATGTCGACTCT
GGAAAGTCGACCACCACCGGACACTTGATCTACAAGCTTGGTGGTATTGA
CAAGCGTGTGATCGAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGA
GGTCATTCAAATACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAA
CGTGGTATTACCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTA
CTACTGCACCGTCATTGATGCTCCCGGACATCGTGACTTTATCAAGAACA
TGATTACCGGTACCTCACAGGCTGACTGTGCTGTCCTCATCATTGACTCT
ACCACTGGTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGA
GCATGCTTTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCT
GTAACAAGATGGACGCCACCACCCCCAAGTATTCAAAGGCTAGGTACGAT
GAAATTGTGAAGGAGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCC
CCGAGAAGTCCCATTCGTGCCCATCTCTGGTTTCGA
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