FC920318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTU_KOSOT (Elongation factor Tu OS=Kosmotoga olearia (strain TBF 19.5.1) GN=tuf PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 65/189 (34.39%), Postives = 92/189 (48.68%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFV 669 + K H+NI IGH+D GK+T T + K A F +DK E+ RGITI++ ++ET K + ID PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA + V M+ NK+D + + + +EV L K + EVP + Sbjct: 8 RTKPHLNIGTIGHIDHGKTTLTAAIT---------------KALAYKGFADFTPFDAIDKAPEEKARGITINVTHVEYETEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGVMP-------QTREHVLLARQVNVPAMVVFINKVDMVD---DEELVELVEEEVRDLLSKYEFPGDEVPVI 171
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTU_DESVV (Elongation factor Tu OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=tuf PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 68/196 (34.69%), Postives = 95/196 (48.47%), Query Frame = 1 Query: 97 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFV 669 MGKEK H+NI IGH+D GK+T T + K A + + F +DK E+ERGITI A ++ET + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK D + + + EV L G+ +VP V Sbjct: 1 MGKEKFERKKPHVNIGTIGHIDHGKTTLTAAIT---------------KTAGLLGQGKFIAYDEIDKAPEEKERGITIATAHVEYETATRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVGVPYIVVFLNKCDMVD---DEELLELVELEVRELLTSYGFPGDDVPVV 171
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTU_DESVH (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=tuf PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 68/196 (34.69%), Postives = 95/196 (48.47%), Query Frame = 1 Query: 97 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFV 669 MGKEK H+NI IGH+D GK+T T + K A + + F +DK E+ERGITI A ++ET + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK D + + + EV L G+ +VP V Sbjct: 1 MGKEKFERKKPHVNIGTIGHIDHGKTTLTAAIT---------------KTAGLLGQGKFIAYDEIDKAPEEKERGITIATAHVEYETATRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVGVPYIVVFLNKCDMVD---DEELLELVELEVRELLTSYGFPGDDVPVV 171
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTU_BOVIN (Elongation factor Tu, mitochondrial OS=Bos taurus GN=TUFM PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 64/190 (33.68%), Postives = 92/190 (48.42%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPREVPFV 669 ++K H+N+ IGHVD GK+T T + K AE FK +D ER RGITI+ A ++ T + D PGH D++KNMITGT+ D +L++ + G QTREH LLA +GV+ ++ NK DA + E+V+ E+ L + GY E P + Sbjct: 53 RDKPHVNVGTIGHVDHGKTTLTAAIT---------------KILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMP-------QTREHLLLARQIGVEHVVVYVNKADAV----QDSEMVELVELEIRELLTEFGYKGEETPII 216
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTUB_NICSY (Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris GN=TUFB PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 60/189 (31.75%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFV 669 ++K H+NI IGHVD GK+T T L L + +++++ +D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ G QT+EH LLA +GV M+ NK D + + + EV L + E+P + Sbjct: 84 RKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDE---------------IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPNMVVFLNKQDQVD---DEELLELVELEVRELLSSYEFPGDEIPII 247
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: CYSN_SULNB (Sulfate adenylyltransferase subunit 1 OS=Sulfurovum sp. (strain NBC37-1) GN=cysN PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 63/199 (31.66%), Postives = 102/199 (51.26%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSF-------KYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678 + K + + G VD GKST G ++Y D ++I + AAE R + A ++D L++ERE+GITID+A F T K + D PGH + +NM+TG S AD A+++ID+ G QTR H+ + LG++ +I NKMD +S+ +D+I + ++G + ++P+S Sbjct: 20 ENKDMLRFLTCGSVDDGKSTLIGRMLY-----DSKMIFDDQLSAAEGESRKYGTTGEKLDMALLVDGLQSEREQGITIDVAYRFFATEKRKFIIADTPGHEQYTRNMVTGASTADVAIILIDARKGILT-------QTRRHSFIVNLLGIEHVIVAINKMDLV--DFSEEVFDKISGAYGALADELGI--KNTYYIPVS 202
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: CYSN_METPB (Sulfate adenylyltransferase subunit 1 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=cysN PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 62/194 (31.96%), Postives = 102/194 (52.58%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678 + K + + G VD GKST G L++ I + ++++ + + + A ++D L+AERE+GITID+A F T + V D PGH + +NM TG S AD AV+++D+ G QTR HALL LG+ ++ NKMD +S+ ++D I+ ++ + ++ EV +P+S Sbjct: 20 QSKEVLRFITCGSVDDGKSTLIGRLLHDTKQIFDDQVTALQRDSRKHGTQGAEVDLALLVDGLQAEREQGITIDVAYRFFSTDRRSFIVADTPGHEQYTRNMATGASTADVAVILVDARHG-------LTRQTRRHALLVSLLGIHRVALAINKMDLV--GWSQDKFDAILSGFQAFAAPLNFS--EVRAIPLS 202
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: CYSN_METC4 (Sulfate adenylyltransferase subunit 1 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=cysN PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 61/194 (31.44%), Postives = 103/194 (53.09%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFK--YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFVPIS 678 + K + + G VD GKST G L++ I + ++++ + + + +A ++D L+AERE+GITID+A F T + V D PGH + +NM TG S AD AV+++D+ G Q+R HALL LG++++ NKMD +S+ +++ IV ++ + + EV +P+S Sbjct: 20 QNKEVLRFITCGSVDDGKSTLIGRLLHDTKQIFDDQVTALQRDSRKHGTQGGEVDFALLVDGLQAEREQGITIDVAYRFFSTDRRSFIVADTPGHEQYTRNMATGASTADLAVILVDARHG-------LTRQSRRHALLVSLLGIRRVALAINKMDLV--GWSQDKFEAIVSGFQAFAAPLNFT--EVRAIPLS 202
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTU_THESQ (Elongation factor Tu OS=Thermotoga sp. (strain RQ2) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 66/189 (34.92%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFV 669 + K H+N+ IGH+D GKST T + L +++ +DK E+ RGITI+I +++T K + ID PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA + V MI NK D D + EV L + GY EVP + Sbjct: 8 RTKPHVNVGTIGHIDHGKSTLTAAITKYLSLKGLAQYVPYDQ---------------IDKAPEEKARGITINITHVEYQTEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVEVPYMIVFINKTDMVD---DPELIDLVEMEVRDLLSQYGYPGDEVPVI 171
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTU_THEP1 (Elongation factor Tu OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 66/189 (34.92%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFV 669 + K H+N+ IGH+D GKST T + L +++ +DK E+ RGITI+I +++T K + ID PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA + V MI NK D D + EV L + GY EVP + Sbjct: 8 RTKPHVNVGTIGHIDHGKSTLTAAITKYLSLKGLAQYVPYDQ---------------IDKAPEEKARGITINITHVEYQTEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVEVPYMIVFINKTDMVD---DPELIDLVEMEVRDLLSQYGYPGDEVPVI 171 The following BLAST results are available for this feature:
BLAST of FC920318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920318 ID=FC920318; Name=FC920318; organism=Citrus clementina; type=EST; length=686bpback to top |