FC920318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTU_RICCN (Elongation factor Tu OS=Rickettsia conorii GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 63/192 (32.81%), Postives = 92/192 (47.92%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFV 669 + K H+NI IGHVD GK++ T + + K GG ++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK+D + + EV L K G+ E+P + Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQ------------------IDAAPEEKERGITISTAHVEYETQNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKIDMVD---DPDLLELVEMEVRELLSKYGFPGDEIPII 171
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTU_RICCK (Elongation factor Tu OS=Rickettsia canadensis (strain McKiel) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 63/192 (32.81%), Postives = 92/192 (47.92%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFV 669 + K H+NI IGHVD GK++ T + + K GG ++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK+D + + EV L K G+ E+P + Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQ------------------IDAAPEEKERGITISTAHVEYETKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYGFPGDEIPII 171
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTU_RICAE (Elongation factor Tu OS=Rickettsia africae (strain ESF-5) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 63/192 (32.81%), Postives = 92/192 (47.92%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFV 669 + K H+NI IGHVD GK++ T + + K GG ++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK+D + + EV L K G+ E+P + Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQ------------------IDAAPEEKERGITISTAHVEYETKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKIDMVD---DPDLLELVEMEVRELLSKYGFPGDEIPII 171
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTU_RAT (Elongation factor Tu, mitochondrial OS=Rattus norvegicus GN=Tufm PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 64/190 (33.68%), Postives = 92/190 (48.42%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPREVPFV 669 ++K H+N+ IGHVD GK+T T + K AE FK +D ER RGITI+ A ++ T + D PGH D++KNMITGT+ D +L++ + G QTREH LLA +GV+ ++ NK DA + E+V+ E+ L + GY E P + Sbjct: 53 RDKPHVNVGTIGHVDHGKTTLTAAIT---------------KILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMP-------QTREHLLLAKQIGVEHVVVYVNKADAV----QDSEMVELVELEIRELLTEFGYKGEETPVI 216
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTU_PROWI (Elongation factor Tu, plastid OS=Prototheca wickerhamii GN=tufA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 66/191 (34.55%), Postives = 96/191 (50.26%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPREVPFVP 672 ++K H+NI IGHVD GK+T T + L AA + KYA + D E+ RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ G QT+EH LLA +GV ++ NK D + E+V+ EV L++ + EVP +P Sbjct: 8 RKKPHVNIGTIGHVDHGKTTLTAAITMAL--------------AARGGGKGKKYAEI-DSAPEEKARGITINTAHVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPNIVVFINKED----QVDDIELIELVELEVRETLQRYDFPGDEVPMIP 172
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTU_MYCVP (Elongation factor Tu OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 564 + K H+NI IGHVD GK+T T I K + +++ ++N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----DLNESRAFDQ---IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKAD 141
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTU_MYCPA (Elongation factor Tu OS=Mycobacterium paratuberculosis GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 564 + K H+NI IGHVD GK+T T I K + +++ ++N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----DLNESRAFDQ---IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKAD 141
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTU_MYCA1 (Elongation factor Tu OS=Mycobacterium avium (strain 104) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 564 + K H+NI IGHVD GK+T T I K + +++ ++N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----DLNESRAFDQ---IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKAD 141
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTU_MOUSE (Elongation factor Tu, mitochondrial OS=Mus musculus GN=Tufm PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 64/190 (33.68%), Postives = 92/190 (48.42%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPREVPFV 669 ++K H+N+ IGHVD GK+T T + K AE FK +D ER RGITI+ A ++ T + D PGH D++KNMITGT+ D +L++ + G QTREH LLA +GV+ ++ NK DA + E+V+ E+ L + GY E P + Sbjct: 53 RDKPHVNVGTIGHVDHGKTTLTAAIT---------------KILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMP-------QTREHLLLAKQIGVEHVVVYVNKADAV----QDSEMVELVELEIRELLTEFGYKGEETPVI 216
BLAST of FC920318 vs. ExPASy Swiss-Prot
Match: EFTU_LACJO (Elongation factor Tu OS=Lactobacillus johnsonii GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 65/189 (34.39%), Postives = 93/189 (49.21%), Query Frame = 1 Query: 103 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPREVPFV 669 + K H+NI IGHVD GK+T T + L E + + +D E+ERGITI+ A ++ET + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK+D D + EV L + Y +VP + Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITTVLAEDGLAQAEDYSQ---------------IDAAPEEKERGITINTAHVEYETKNRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVQYIVVFLNKVDLVD---DPELIDLVEMEVRDLLSEYDYPGDDVPVI 172 The following BLAST results are available for this feature:
BLAST of FC920318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920318 ID=FC920318; Name=FC920318; organism=Citrus clementina; type=EST; length=686bpback to top |