FC920320

Overview
NameFC920320
Unique NameFC920320
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length643
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15512 contig Ccv1_Contig15512:5..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: GRP78_ASPKA (78 kDa glucose-regulated protein homolog OS=Aspergillus kawachi GN=bipA PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.779e-52
Identity = 103/168 (61.31%), Postives = 130/168 (77.38%), Query Frame = 1
Query:  148 SLVVLAIVFFGGL--FAISIAKEEAT---KLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            ++  L +VF   L  F  + A++E +     GTVIGIDLGTTYSCVGV +NG VEI+ NDQGNRITPS+VAFTD ERL+G+AAKNQ A NP RTIFD+KRLIGRKF+DK+VQ+D K  PYK+VN+DGKP+++V +     K  +PEE+SAM+L KMKE AE +LGKK+
Sbjct:   18 TIFYLLLVFIAPLAFFGTAHAQDETSPQESYGTVIGIDLGTTYSCVGVMQNGKVEILVNDQGNRITPSYVAFTDEERLVGDAAKNQYAANPRRTIFDIKRLIGRKFDDKDVQKDAKHFPYKVVNKDGKPHVKVDVNQ-TPKTLTPEEVSAMVLGKMKEIAEGYLGKKV 184          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: GRP78_ASPAW (78 kDa glucose-regulated protein homolog OS=Aspergillus awamori GN=bipA PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.779e-52
Identity = 103/168 (61.31%), Postives = 130/168 (77.38%), Query Frame = 1
Query:  148 SLVVLAIVFFGGL--FAISIAKEEAT---KLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            ++  L +VF   L  F  + A++E +     GTVIGIDLGTTYSCVGV +NG VEI+ NDQGNRITPS+VAFTD ERL+G+AAKNQ A NP RTIFD+KRLIGRKF+DK+VQ+D K  PYK+VN+DGKP+++V +     K  +PEE+SAM+L KMKE AE +LGKK+
Sbjct:   18 TIFYLLLVFIAPLAFFGTAHAQDETSPQESYGTVIGIDLGTTYSCVGVMQNGKVEILVNDQGNRITPSYVAFTDEERLVGDAAKNQYAANPRRTIFDIKRLIGRKFDDKDVQKDAKHFPYKVVNKDGKPHVKVDVNQ-TPKTLTPEEVSAMVLGKMKEIAEGYLGKKV 184          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.935e-52
Identity = 97/137 (70.80%), Postives = 116/137 (84.67%), Query Frame = 1
Query:  226 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            G  IGIDLGTTYSCVGV++NG VEIIANDQGNR TPS+VAFTDSERLIG+AAKNQ A+NP  TIFD KRLIGR+F D  +Q DMK  P++++N+DGKP +Q +   GETK  SPEE+S+M+LTKMKETAEA+LGKK+
Sbjct:    4 GPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAKRLIGRRFNDSSIQADMKHWPFRVINKDGKPMLQAEYM-GETKTLSPEEVSSMVLTKMKETAEAYLGKKV 139          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: GRP78_CANGA (78 kDa glucose-regulated protein homolog OS=Candida glabrata GN=KAR2 PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.418e-52
Identity = 101/161 (62.73%), Postives = 126/161 (78.26%), Query Frame = 1
Query:  169 VFFGGLFAISI-----AKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            +F   LF + +     AK++    GTVIGIDLGTTYSCV V KNG  EI+AN+QGNRITPS+VAFTD ERLIG+AAKNQ A NP  TIFD+KRLIG KF D+ VQRD+K  P+K+V++DGKP +QV+++ GE +VF+PEEIS MIL KMK+ AE +LGKK+
Sbjct:   12 LFLYALFVVLLPFQARAKDDVENYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQIAANPTNTIFDIKRLIGLKFNDRSVQRDIKHLPFKVVDKDGKPVVQVKVK-GEDRVFTPEEISGMILGKMKQIAEDYLGKKV 171          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 2.449e-51
Identity = 101/135 (74.81%), Postives = 118/135 (87.41%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDG-KPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            IGIDLGTTYSCVGV++N  VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF DKEVQ DMK  P+K++ +DG KP+IQV+ + GETKVFSPEEIS+M+L KMKETAEA+LGK I
Sbjct:    4 IGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDKEVQSDMKHWPFKVIPKDGDKPHIQVEFK-GETKVFSPEEISSMVLLKMKETAEAYLGKTI 137          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 197.208 bits (500), Expect = 6.033e-50
Identity = 95/134 (70.90%), Postives = 115/134 (85.82%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            IGIDLGTTYSCVG + N  VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  TIFD KRLIGRKF+D EVQ DMK  P+K++++DGKP +QV+ + GETK F+PEEIS+M+L KM+ETAEA+LG K+
Sbjct:    5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYK-GETKTFTPEEISSMVLMKMRETAEAYLGGKV 137          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.033e-50
Identity = 97/138 (70.29%), Postives = 113/138 (81.88%), Query Frame = 1
Query:  214 ATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLG 627
            A   GT IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMKL P++++N  GKP + V  + GE K F PEEIS+M+LTKMKETAEAFLG
Sbjct:    2 AAAKGTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEGGKPKVMVSYK-GEKKAFYPEEISSMVLTKMKETAEAFLG 138          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.033e-50
Identity = 97/138 (70.29%), Postives = 113/138 (81.88%), Query Frame = 1
Query:  214 ATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLG 627
            A   GT IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMKL P++++N  GKP + V  + GE K F PEEIS+M+LTKMKETAEAFLG
Sbjct:    2 AAAKGTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEGGKPKVMVSYK-GEKKAFYPEEISSMVLTKMKETAEAFLG 138          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 7.879e-50
Identity = 97/137 (70.80%), Postives = 115/137 (83.94%), Query Frame = 1
Query:  226 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            G  IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  TIFD KRLIGRKFED  VQ DMK  P+++V+  GKP +QV+ + GETK F PEEIS+M+LTKMKE AEA+LG K+
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYK-GETKTFFPEEISSMVLTKMKEIAEAYLGGKV 140          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 7.879e-50
Identity = 96/137 (70.07%), Postives = 115/137 (83.94%), Query Frame = 1
Query:  226 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            G  IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  TIFD KRLIGRK++D  VQ DMK  P+++VN  GKP +QV+ + GE K F PEEIS+M+LTKMKE AEA+LGKK+
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKYDDPTVQSDMKHWPFRVVNEGGKPKVQVEYK-GEMKTFFPEEISSMVLTKMKEIAEAYLGKKV 140          
The following BLAST results are available for this feature:
BLAST of FC920320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_ASPKA3.779e-5261.3178 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPAW3.779e-5261.3178 kDa glucose-regulated protein homolog OS=Asperg... [more]
HSP74_PARLI4.935e-5270.80Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
GRP78_CANGA8.418e-5262.7378 kDa glucose-regulated protein homolog OS=Candid... [more]
HS7C1_DICDI2.449e-5174.81Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HSP72_SCHPO6.033e-5070.90Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HS71L_PIG6.033e-5070.29Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HS71L_BOVIN6.033e-5070.29Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HSP72_HUMAN7.879e-5070.80Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP70_CHICK7.879e-5070.07Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionC32006G10EF RVDevelop1 Citrus clementina cDNA clone C32006G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920320 ID=FC920320; Name=FC920320; organism=Citrus clementina; type=EST; length=643bp
GGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACACACTTCAAACATCGAA
ACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGGAGTTTGAAGCAGGGTA
TAATTGCTGCAGTACGCGCGATGGCTGGCTCGTGGAGAGCACGCGGGTCC
CTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTCTTTTTGCAATTTCAAT
TGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTGATTGGGATAGATCTTG
GTACAACTTATTCTTGTGTTGGTGTTTACAAGAATGGTCATGTCGAAATC
ATAGCCAATGATCAAGGAAACCGTATTACTCCATCATGGGTTGCATTCAC
TGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAGAATCAGGCTGCTGTCA
ATCCTGACAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAAGTTT
GAGGACAAGGAGGTTCAGAGGGACATGAAGCTTGCTCCTTACAAGATTGT
GAATAGGGATGGAAAGCCTTATATTCAGGTTCAGATTAGGGACGGCGAGA
CCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTATGATACTGACTAAGATG
AAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAATTAGGATGC
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