FC920320

Overview
NameFC920320
Unique NameFC920320
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length643
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15512 contig Ccv1_Contig15512:5..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.323e-48
Identity = 90/135 (66.67%), Postives = 113/135 (83.70%), Query Frame = 1
Query:  223 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLG 627
            +   +GIDLGTTYSCVG++++  +EIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D EVQ DMK  P+K+V + GKP +QV+ + GE K F+PEEIS+M+LTKM+ETAEA+LG
Sbjct:    1 MAPAVGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRKFNDAEVQADMKHFPFKVVEKSGKPIVQVEFK-GEEKQFTPEEISSMVLTKMRETAEAYLG 134          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.323e-48
Identity = 93/137 (67.88%), Postives = 115/137 (83.94%), Query Frame = 1
Query:  226 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            G  IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP+ T+FD KRLIGRKF D+ VQ DMK  P+K+V+  GKP +QV  + GE K F+PEEIS+M+L KM+E AEA+LG+K+
Sbjct:    6 GPSIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTVFDAKRLIGRKFNDQVVQADMKHWPFKVVSDGGKPKVQVDYK-GENKSFNPEEISSMVLVKMREIAEAYLGQKV 141          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 5.647e-48
Identity = 93/139 (66.91%), Postives = 115/139 (82.73%), Query Frame = 1
Query:  223 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 639
            +   +GID GTTYSCV  + N  VEIIANDQGNR TPS+VAFTD+ERL G+AAKNQAA+NP  T+FD KRLIGRKF+D EVQ D+K  P+K+V++ GKP IQV+ + GETKVF+PEEIS+M+LTKMKETAE+FLG  ++
Sbjct:    1 MSKAVGIDGGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLSGDAAKNQAAMNPANTVFDAKRLIGRKFDDPEVQGDIKHFPFKVVDKSGKPQIQVEFK-GETKVFTPEEISSMVLTKMKETAESFLGTTVK 138          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP68_DROME (Heat shock protein 68 OS=Drosophila melanogaster GN=Hsp68 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.647e-48
Identity = 91/135 (67.41%), Postives = 114/135 (84.44%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 639
            IGIDLGTTYSCVGV++ G VEIIANDQGNR TPS+VAFTDSERLIG+AAKNQ A+NP  ++FD KRLIGR+F+D ++Q D+K  P+K++N +GKP I V+ + G  K FSPEEIS+M+LTKMKETAEA+LG  ++
Sbjct:    4 IGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVFDAKRLIGRRFDDSKIQEDIKHWPFKVINDNGKPKISVEFK-GANKCFSPEEISSMVLTKMKETAEAYLGTTVK 137          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP7D_CAEEL (Heat shock 70 kDa protein D OS=Caenorhabditis elegans GN=hsp-4 PE=1 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 7.375e-48
Identity = 92/146 (63.01%), Postives = 121/146 (82.88%), Query Frame = 1
Query:  208 EEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT--DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 639
            E+  K+GT+IGIDLGTTYSCVGV+KNG VEIIANDQGNRITPS+VAF+    ERLIG+AAKNQ  +NP+ TIFD KRLIGR + +K VQ+D+K  P+KIV++  KP ++V++   ETK F+PEE+SAM+LTKMK+ AE++LG +++
Sbjct:   24 EKEEKMGTIIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKV-GSETKQFTPEEVSAMVLTKMKQIAESYLGHEVK 168          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 7.375e-48
Identity = 95/169 (56.21%), Postives = 127/169 (75.15%), Query Frame = 1
Query:  169 VFFGGLFAISIA----------KEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT--DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 639
            +F  GL A+S            +++ TK GT+IGIDLGTTYSCVGVYKNG VEIIANDQGNRITPS+VAF+    +RLIG+AAKNQ  +NP+ TIFD KRLIGR + DK VQ D+K  P+K++++  KP ++V++   + K F+PEE+SAM+L KMKE AE++LGK+++
Sbjct:    4 LFLLGLIALSAVSVYCEEEEKTEKKETKYGTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKV-GSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVK 171          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 7.375e-48
Identity = 94/131 (71.76%), Postives = 111/131 (84.73%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLG 627
            IGIDLGTTYSCVGV++N  VEIIANDQGNR TPS+VAFTD+ERLIG++AKNQ A+NP  T+FD KRLIGRKF D EVQ D+K  P+ + ++ GKPYI+VQ R GE K FSPEEIS+MILTKMKE AE++LG
Sbjct:    5 IGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDSAKNQVAMNPHNTVFDAKRLIGRKFADAEVQSDIKHFPFTVFDKGGKPYIRVQYR-GEDKEFSPEEISSMILTKMKEVAESYLG 134          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 7.375e-48
Identity = 95/136 (69.85%), Postives = 113/136 (83.09%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNR-DGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 639
            IGIDLGTTYSCVGV+ +G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD  RLIGRKF+D  VQ DMK  P+K+VN   GKP +QV+ + GETK F+PEEIS+M+L KMKETAEAFLG  ++
Sbjct:    6 IGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDANRLIGRKFDDGSVQSDMKHWPFKVVNAGGGKPKVQVEYK-GETKTFTPEEISSMVLVKMKETAEAFLGHAVK 140          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 7.375e-48
Identity = 95/141 (67.38%), Postives = 115/141 (81.56%), Query Frame = 1
Query:  217 TKLGT-VIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            TKL +  +GIDLGTTYSCVGV++N  VEIIANDQGNR TPS+V FTDSERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D  VQ DMK   + +VN++ KP  QV+ + GETK F+PEE S+MILTKMKETAEA+LG K+
Sbjct:    3 TKLDSPAVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRRFDDDVVQADMKHWSFTVVNKNSKPLFQVEFK-GETKTFTPEEFSSMILTKMKETAEAYLGTKV 142          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 9.632e-48
Identity = 93/137 (67.88%), Postives = 113/137 (82.48%), Query Frame = 1
Query:  226 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTDSERLIG+AAKNQ A+NP  TIFD KRLIGR+FED  VQ DMK  P+K+++  G+P ++V+ + GE K F PEEIS+M+L KMKE AEA+LGK I
Sbjct:    4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAKRLIGRRFEDSVVQADMKHWPFKVISDGGRPRLEVEYK-GEAKNFYPEEISSMVLVKMKEIAEAYLGKSI 139          
The following BLAST results are available for this feature:
BLAST of FC920320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_TRIRU4.323e-4866.67Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HSP70_ONCTS4.323e-4867.88Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP72_PICAN5.647e-4866.91Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]
HSP68_DROME5.647e-4867.41Heat shock protein 68 OS=Drosophila melanogaster G... [more]
HSP7D_CAEEL7.375e-4863.01Heat shock 70 kDa protein D OS=Caenorhabditis eleg... [more]
HSP7C_CAEEL7.375e-4856.21Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]
HSP71_PUCGR7.375e-4871.76Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HSP70_BRUMA7.375e-4869.85Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
HSP70_BLAEM7.375e-4867.38Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP7C_ICTPU9.632e-4867.88Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]

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Properties
Property NameValue
Genbank descriptionC32006G10EF RVDevelop1 Citrus clementina cDNA clone C32006G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920320 ID=FC920320; Name=FC920320; organism=Citrus clementina; type=EST; length=643bp
GGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACACACTTCAAACATCGAA
ACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGGAGTTTGAAGCAGGGTA
TAATTGCTGCAGTACGCGCGATGGCTGGCTCGTGGAGAGCACGCGGGTCC
CTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTCTTTTTGCAATTTCAAT
TGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTGATTGGGATAGATCTTG
GTACAACTTATTCTTGTGTTGGTGTTTACAAGAATGGTCATGTCGAAATC
ATAGCCAATGATCAAGGAAACCGTATTACTCCATCATGGGTTGCATTCAC
TGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAGAATCAGGCTGCTGTCA
ATCCTGACAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAAGTTT
GAGGACAAGGAGGTTCAGAGGGACATGAAGCTTGCTCCTTACAAGATTGT
GAATAGGGATGGAAAGCCTTATATTCAGGTTCAGATTAGGGACGGCGAGA
CCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTATGATACTGACTAAGATG
AAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAATTAGGATGC
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