FC920320

Overview
NameFC920320
Unique NameFC920320
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length643
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15512 contig Ccv1_Contig15512:5..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.258e-47
Identity = 92/136 (67.65%), Postives = 115/136 (84.56%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDG-KPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 639
            +GIDLGTTYSCVGV+ +G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF+D  VQ DMK  P+K+++ +G KP +QV+ + GE K+F+PEEIS+M+L KMKETAEAFLG  ++
Sbjct:    7 VGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYK-GENKIFTPEEISSMVLLKMKETAEAFLGTTVK 141          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.258e-47
Identity = 93/134 (69.40%), Postives = 114/134 (85.07%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            IGIDLGTTYSCVGVY++G VEIIANDQGNR TPS+VAFTDSERLIG+ AKNQ A+NP  T+FD KRLIGRK++D ++  DMK  P+K+V+  GKP I V+ + GE+K F+PEEIS+M+LTKMKETAEA+LG+ I
Sbjct:    4 IGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYK-GESKRFAPEEISSMVLTKMKETAEAYLGESI 136          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.258e-47
Identity = 93/134 (69.40%), Postives = 114/134 (85.07%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            IGIDLGTTYSCVGVY++G VEIIANDQGNR TPS+VAFTDSERLIG+ AKNQ A+NP  T+FD KRLIGRK++D ++  DMK  P+K+V+  GKP I V+ + GE+K F+PEEIS+M+LTKMKETAEA+LG+ I
Sbjct:    4 IGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYK-GESKRFAPEEISSMVLTKMKETAEAYLGESI 136          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP73_DROME (Major heat shock 70 kDa protein Bb OS=Drosophila melanogaster GN=Hsp70Bb PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.258e-47
Identity = 93/134 (69.40%), Postives = 114/134 (85.07%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            IGIDLGTTYSCVGVY++G VEIIANDQGNR TPS+VAFTDSERLIG+ AKNQ A+NP  T+FD KRLIGRK++D ++  DMK  P+K+V+  GKP I V+ + GE+K F+PEEIS+M+LTKMKETAEA+LG+ I
Sbjct:    4 IGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYK-GESKRFAPEEISSMVLTKMKETAEAYLGESI 136          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP72_DROME (Major heat shock 70 kDa protein Ba OS=Drosophila melanogaster GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.258e-47
Identity = 93/134 (69.40%), Postives = 114/134 (85.07%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            IGIDLGTTYSCVGVY++G VEIIANDQGNR TPS+VAFTDSERLIG+ AKNQ A+NP  T+FD KRLIGRK++D ++  DMK  P+K+V+  GKP I V+ + GE+K F+PEEIS+M+LTKMKETAEA+LG+ I
Sbjct:    4 IGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYK-GESKRFAPEEISSMVLTKMKETAEAYLGESI 136          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 189.504 bits (480), Expect = 1.258e-47
Identity = 94/139 (67.63%), Postives = 113/139 (81.29%), Query Frame = 1
Query:  223 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 639
            +   +GIDLGTTYSCV  + N  VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQAA+NP  T+FD KRLIGRKF+D EVQ D+K  P+K+V++  KP IQV+ + GETK FSPEEIS+MIL KMKETAE FLG  ++
Sbjct:    1 MSKAVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAKRLIGRKFDDHEVQGDIKHFPFKVVDKASKPMIQVEYK-GETKTFSPEEISSMILGKMKETAEGFLGTTVK 138          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP71_DROME (Major heat shock 70 kDa protein Ab OS=Drosophila melanogaster GN=Hsp70Ab PE=1 SV=3)

HSP 1 Score: 189.504 bits (480), Expect = 1.258e-47
Identity = 93/134 (69.40%), Postives = 114/134 (85.07%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            IGIDLGTTYSCVGVY++G VEIIANDQGNR TPS+VAFTDSERLIG+ AKNQ A+NP  T+FD KRLIGRK++D ++  DMK  P+K+V+  GKP I V+ + GE+K F+PEEIS+M+LTKMKETAEA+LG+ I
Sbjct:    4 IGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYK-GESKRFAPEEISSMVLTKMKETAEAYLGESI 136          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP70_DROME (Major heat shock 70 kDa protein Aa OS=Drosophila melanogaster GN=Hsp70Aa PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.258e-47
Identity = 93/134 (69.40%), Postives = 114/134 (85.07%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            IGIDLGTTYSCVGVY++G VEIIANDQGNR TPS+VAFTDSERLIG+ AKNQ A+NP  T+FD KRLIGRK++D ++  DMK  P+K+V+  GKP I V+ + GE+K F+PEEIS+M+LTKMKETAEA+LG+ I
Sbjct:    4 IGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYK-GESKRFAPEEISSMVLTKMKETAEAYLGESI 136          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.643e-47
Identity = 91/137 (66.42%), Postives = 113/137 (82.48%), Query Frame = 1
Query:  226 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D  VQ DMK  P+ +VN  G+P +QV+ + GETK F PEE+S+M+L KMKE AEA+LGK +
Sbjct:    4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYK-GETKSFYPEEVSSMVLAKMKEIAEAYLGKTV 139          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.643e-47
Identity = 91/137 (66.42%), Postives = 113/137 (82.48%), Query Frame = 1
Query:  226 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D  VQ DMK  P+ +VN  G+P +QV+ + GE K F PEE+S+M+LTKMKE AEA+LGK +
Sbjct:    4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYK-GEAKSFYPEEVSSMVLTKMKEIAEAYLGKTV 139          
The following BLAST results are available for this feature:
BLAST of FC920320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7A_CAEEL1.258e-4767.65Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP75_DROME1.258e-4769.40Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]
HSP74_DROME1.258e-4769.40Major heat shock 70 kDa protein Bbb OS=Drosophila ... [more]
HSP73_DROME1.258e-4769.40Major heat shock 70 kDa protein Bb OS=Drosophila m... [more]
HSP72_DROME1.258e-4769.40Major heat shock 70 kDa protein Ba OS=Drosophila m... [more]
HSP72_CANAL1.258e-4767.63Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP71_DROME1.258e-4769.40Major heat shock 70 kDa protein Ab OS=Drosophila m... [more]
HSP70_DROME1.258e-4769.40Major heat shock 70 kDa protein Aa OS=Drosophila m... [more]
HSP7C_PONAB1.643e-4766.42Heat shock cognate 71 kDa protein OS=Pongo abelii ... [more]
HSP7C_CRIGR1.643e-4766.42Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]

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Properties
Property NameValue
Genbank descriptionC32006G10EF RVDevelop1 Citrus clementina cDNA clone C32006G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920320 ID=FC920320; Name=FC920320; organism=Citrus clementina; type=EST; length=643bp
GGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACACACTTCAAACATCGAA
ACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGGAGTTTGAAGCAGGGTA
TAATTGCTGCAGTACGCGCGATGGCTGGCTCGTGGAGAGCACGCGGGTCC
CTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTCTTTTTGCAATTTCAAT
TGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTGATTGGGATAGATCTTG
GTACAACTTATTCTTGTGTTGGTGTTTACAAGAATGGTCATGTCGAAATC
ATAGCCAATGATCAAGGAAACCGTATTACTCCATCATGGGTTGCATTCAC
TGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAGAATCAGGCTGCTGTCA
ATCCTGACAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAAGTTT
GAGGACAAGGAGGTTCAGAGGGACATGAAGCTTGCTCCTTACAAGATTGT
GAATAGGGATGGAAAGCCTTATATTCAGGTTCAGATTAGGGACGGCGAGA
CCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTATGATACTGACTAAGATG
AAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAATTAGGATGC
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