FC920323

Overview
NameFC920323
Unique NameFC920323
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length655
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14439 contig Ccv1_Contig14439:34..688. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: ZFAN5_HUMAN (AN1-type zinc finger protein 5 OS=Homo sapiens GN=ZFAND5 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.245e-23
Identity = 66/191 (34.55%), Postives = 86/191 (45.03%), Query Frame = 2
Query:  218 GPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQ------------AKLAASSIGSIVNETSSSNGSESVAAAT------VDVQASSV-----------------------EPKIISVQPSCA----SELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            GP+LC   CGF+G+  T  MCS CYK+ + +Q              +    S   S+    +S N  E  A +T      V V A  V                       EP +    PS +    S+  E     PK   +RC  C+K+VGLTGF CRCGNL+C  HRYSD+HNCP+DY+  A   I K
Sbjct:   10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRK 200          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP3_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica GN=SAP3 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.245e-23
Identity = 56/152 (36.84%), Postives = 88/152 (57.89%), Query Frame = 2
Query:  203 QAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPS-RCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            QA    P+LC + CGF+G+ AT++MCS CY+   L    A +A     S+   ++++  + +V + +  V ++ V     S + +      E      K+ P+ RC+SCKK+VGL GF CRCG  YC +HRY ++H C FD++ A+RDAI +
Sbjct:  196 QASAGQPVLCASGCGFYGNPATLDMCSVCYRQHCLLNG-ATMATGPSSSVAAASAATVATGAVTSDSCSVPSAEVNGAAFSSKNN-----PEPATVVEKKAPANRCASCKKKVGLLGFACRCGATYCGTHRYPEKHACGFDFKGASRDAIAR 341          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP9_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana GN=SAP9 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.830e-23
Identity = 56/169 (33.14%), Postives = 88/169 (52.07%), Query Frame = 2
Query:  170 GENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPK-------IISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            G   +   +  Q+    P LC+  CGFFGS + M++CSKCY+ I  ++ Q  +A +++        S   S   +    +  A  VEPK       ++S +PS +S + E+ E       +RC  C K+VG+ GFKC+CG+ +C  HRY + H+C FD++   R  I K
Sbjct:    2 GSEQNDSTSFTQSQASEPKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAV------EKSFKPSPPRSLFIAEPPAVVVEPKPEKAAVVVVSAEPS-SSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGSTFCGEHRYPETHDCSFDFKEVGRGEIAK 163          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP5_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana GN=SAP5 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.002e-23
Identity = 55/143 (38.46%), Postives = 81/143 (56.64%), Query Frame = 2
Query:  227 LCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            LC NNCG   + AT NMC KC+   ++    A       GSI+  ++ S    S  A  V      + P+ I           ++V+ + ++  +RCS C+K+VGLTGF+CRCG L+C  HRYSD+H+C +DY+TA R+AI +
Sbjct:   25 LCTNNCGVTANPATNNMCQKCFNASLVS---AAAGVVESGSILKRSARSVNLRSSPAKVV------IRPREI-----------DAVKKRDQQIVNRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIAR 147          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: ZFAN6_RAT (AN1-type zinc finger protein 6 OS=Rattus norvegicus GN=Zfand6 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.114e-22
Identity = 67/203 (33.00%), Postives = 97/203 (47.78%), Query Frame = 2
Query:  215 EGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQ------------------------------------------PSCAS--------ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            + P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S   + V+  S S      +GS   A + +D  +SS++P  +S Q                                          PS  S        E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K
Sbjct:    9 QAPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPVQCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGLVPLECDPPSSVSDTTQQPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRK 210          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: ZFAN6_MOUSE (AN1-type zinc finger protein 6 OS=Mus musculus GN=Zfand6 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.114e-22
Identity = 67/203 (33.00%), Postives = 97/203 (47.78%), Query Frame = 2
Query:  215 EGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQ------------------------------------------PSCAS--------ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            + P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S   + V+  S S      +GS   A + +D  +SS++P  +S Q                                          PS  S        E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K
Sbjct:    9 QAPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPVQCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGLVPLECDPPSSVSDTTQQPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRK 210          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP12_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica GN=SAP12 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.483e-22
Identity = 59/163 (36.20%), Postives = 86/163 (52.76%), Query Frame = 2
Query:  173 ENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEP--KIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            E  +       A  E   LC + CGFFGS  T NMCSKCY+D +        A S + S    +SSS  + S    TV +  ++  P   +   +    +  S S  A  K  P+RC +C+K+VGL GF+CRCG  +C +HR++D+H C FD++ + R+ I K
Sbjct:   62 EEEEASTAAAAAADEQLALCSSGCGFFGSKETNNMCSKCYRDHLK-------ATSPLFS----SSSSPATASTTDITVPIAPATTAPTPSLKGKEEEATAAASSSAAAAAK--PNRCVACRKKVGLLGFECRCGGTFCSTHRHADKHACTFDFKKSDREKIAK 211          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP2_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Oryza sativa subsp. japonica GN=SAP2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.434e-22
Identity = 60/156 (38.46%), Postives = 81/156 (51.92%), Query Frame = 2
Query:  191 ETGCQAPPEGPIL-CINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            E G +   E P L C N CGFFGS  T  +CSKCY+  ++ Q  A  AA+          S+   + V  A          P+ + V             AK K   SRC++C + VGL GF+CRCG ++C +HRYSD+H+C +DYR A RDAI +
Sbjct:    2 EQGSERQDERPPLPCANGCGFFGSADTRGLCSKCYRQTVMSQASAPSAAAQ---------SAEHDQVVLPA----------PEGVPVDEGAMPPPPPRHGAKTK---SRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDCGYDYRGAGRDAIAR 135          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP8_ARATH (Putative zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Arabidopsis thaliana GN=SAP8 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.475e-19
Identity = 50/145 (34.48%), Postives = 71/145 (48.97%), Query Frame = 2
Query:  221 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            P LCI  CGFF +  T N+CSKCY D +  +    LA  ++        ++  +E V A          E  ++  +  CA                    CKK+VGL GF CRCG+L+  SHRY ++H+CP DY++AA D + K
Sbjct:    5 PSLCIRGCGFFSTSQTKNLCSKCYNDFLKDESARYLATFNV--------NTKAAEEVTAQ---------EATVLGSKGGCA--------------------CKKKVGLLGFHCRCGHLFFASHRYPEEHSCPSDYKSAAIDVLAK 112          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP10_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Arabidopsis thaliana GN=SAP10 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.036e-16
Identity = 46/140 (32.86%), Postives = 67/140 (47.86%), Query Frame = 2
Query:  230 CINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAI 649
            C   CG +G+    N+CS CYK  +L+   A                                   EP+    Q  C    S +VE +P +   RC  CK++VG+ GFKCRCG+++C SHRY ++H+CPFDY+ + R A+
Sbjct:   10 CEGGCGLYGTRVNNNLCSLCYKKSVLQHSPAL--------------------------------RFEPETEQSQ-CCPPTNSPAVEEEPVK-KRRCGICKRKVGMLGFKCRCGHMFCGSHRYPEEHSCPFDYKQSGRLAL 115          
The following BLAST results are available for this feature:
BLAST of FC920323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
ZFAN5_HUMAN2.245e-2334.55AN1-type zinc finger protein 5 OS=Homo sapiens GN=... [more]
SAP3_ORYSJ2.245e-2336.84Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ARATH3.830e-2333.14Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP5_ARATH5.002e-2338.46Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_RAT1.114e-2233.00AN1-type zinc finger protein 6 OS=Rattus norvegicu... [more]
ZFAN6_MOUSE1.114e-2233.00AN1-type zinc finger protein 6 OS=Mus musculus GN=... [more]
SAP12_ORYSJ2.483e-2236.20Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ORYSJ9.434e-2238.46Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ARATH7.475e-1934.48Putative zinc finger A20 and AN1 domain-containing... [more]
SAP10_ARATH2.036e-1632.86Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionC32006H02EF RVDevelop1 Citrus clementina cDNA clone C32006H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920323 ID=FC920323; Name=FC920323; organism=Citrus clementina; type=EST; length=655bp
CGGGGGACACCCGGAAAGGGAAACGACGACGTCTCTAATCGGTTTTTGCC
TGCTCTCTCCCCGTAGGCCGATCTGGTCCATTTAATTTTAGGGGCTCATT
GGATGCTGGCTTGAGCTCGGGGATCGGCTTAAGGGATTCATTGCTGTTTC
TTCTGTTGCTCGCAGGGGTGGTGAAAACATGGACCATGATGAGACTGGAT
GCCAAGCTCCTCCTGAGGGCCCTATCTTGTGCATCAACAATTGTGGTTTC
TTTGGAAGTGTGGCTACTATGAATATGTGTTCCAAATGCTACAAGGATAT
AATGCTGAAACAGGATCAAGCTAAGCTTGCTGCTTCATCTATTGGAAGCA
TTGTGAATGAAACGTCAAGCAGCAATGGAAGTGAATCTGTTGCTGCTGCC
ACTGTTGATGTGCAAGCTAGTTCAGTGGAGCCAAAAATCATCTCTGTGCA
GCCATCATGTGCTTCAGAATTGAGCGAGAGTGTGGAGGCAAAGCCGAAGG
AGGGTCCCAGCCGGTGCAGCAGTTGCAAGAAGCGTGTTGGTTTAACAGGA
TTCAAATGTCGCTGTGGTAACTTATACTGTGTGTCACATCGCTATTCGGA
CCAACATAACTGCCCCTTTGACTACCGCACTGCTGCTAGGGATGCTATAA
TTAAA
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