FC920332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920332 vs. ExPASy Swiss-Prot
Match: IF6_AERPE (Translation initiation factor 6 OS=Aeropyrum pernix GN=eif6 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.103e-13 Identity = 48/148 (32.43%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 206 RLMFENSCEVGVFSKLTNAYCLVAIG-GSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGYILVGS 646 +L + +GV+ +++Y L G++ + E + VV+ + G R++G L GN G+LLP D+E++ +R +L + V V + R +ALGN I CND L L++E + ++D LGVEV ++AG VGS Sbjct: 11 KLSLYGNPNIGVYLTASDSYVLAPDDIGADDVRTISEVLGVAMERVVRLRVLGMRLVGVLTTGNSRGILLPEGV-DREVELVRKAL-EGVEVGIVPTRSNALGNVIVCNDRACLASPGLEKEALKTVSDTLGVEVVEGSVAGVYTVGS 156
BLAST of FC920332 vs. ExPASy Swiss-Prot
Match: IF6_METST (Translation initiation factor 6 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=eif6 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.041e-12 Identity = 48/150 (32.00%), Postives = 78/150 (52.00%), Query Frame = 2 Query: 197 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGYILVGS 646 M + + + +GV + +V+ G +S+ + + L P++KT I G+ + G L AGN NGLL+ EL LR + V+ + ++L+A+GN I ND+ AL + L E + +I + L VEV +IAG +VGS Sbjct: 1 MIQKFDIDGNPNLGVSILAKDNVAIVSPGLQDSYLKSIKETLN--VPIIKTPICGSNLAGALMAGNSNGLLISPYVFSHELDVLREH---DINVEIMPDKLTAIGNIIVANDNGALVNPSLSDEAKRIIKNTLEVEVVETSIAGLDIVGS 145
BLAST of FC920332 vs. ExPASy Swiss-Prot
Match: IF6_THEPD (Translation initiation factor 6 OS=Thermofilum pendens (strain Hrk 5) GN=eif6 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12 Identity = 45/139 (32.37%), Postives = 70/139 (50.36%), Query Frame = 2 Query: 233 VGVFSKLTNAYCLVAIGGSESFYSTFEAELA-DVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGYILVGS 646 +GV+ + + L+ E L+ D F V S+ GTR++G AGN NGL++P D EL+HL++ L +VV + R + +GN + ND+ + L + + IAD LGVE + +I VGS Sbjct: 15 IGVYIFANDRFALIPYDAPEKLDRKIAENLSVDAFRV---SVAGTRLVGIFLAGNNNGLVVPRVILDSELEHLKSLLDVNIVVLE-DVRETGIGNLVLANDNGCVASQILPKSAVDRIADALGVECIQMSIGDVPFVGS 149
BLAST of FC920332 vs. ExPASy Swiss-Prot
Match: IF6_METBU (Translation initiation factor 6 OS=Methanococcoides burtonii (strain DSM 6242) GN=eif6 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12 Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = 2 Query: 233 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGYILVG 643 +GVF+ T +V IG + AE DV V+ T I G+ ++G L GN NG L+ +L+ + +V V+ + + L+A+GN I ND AL H ++ + E+I+ VLGV+V R TIAG VG Sbjct: 13 LGVFATCTEDVAIVPIGTAGKAIDLL-AEQLDV-KVISTLINGSIVVGSLSKGNSNGFLISRDANVSDLKDV------EVPVEVLPDMLTAVGNVILANDTAALVHPEMTDSSIEVISRVLGVDVHRGTIAGLGTVG 141
BLAST of FC920332 vs. ExPASy Swiss-Prot
Match: IF6_HYPBU (Translation initiation factor 6 OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=eif6 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.776e-12 Identity = 50/139 (35.97%), Postives = 73/139 (52.52%), Query Frame = 2 Query: 233 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVE-VFRQTIAGYILVGS 646 +GV+ N LV +E E L V++T I I G + AGN NGLLLP +EL +LR + D+V ++ +E R +ALGN IA N+ AL +D+ + I VLGVE ++++ +A VGS Sbjct: 13 IGVYIYANNKIALVPPTLTEKDKKKIEETLG--VEVIETKIADMIINGVMIAGNDNGLLLPRIVKPEELDYLREHIGDKVRLEILEVRQTALGNLIAANNRGALVSPLIDKAILDKIKSVLGVETIYQRHLANIPTVGS 149
BLAST of FC920332 vs. ExPASy Swiss-Prot
Match: IF6_METPE (Translation initiation factor 6 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=eif6 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12 Identity = 45/149 (30.20%), Postives = 73/149 (48.99%), Query Frame = 2 Query: 197 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGYILVG 643 M L +E +G+F+++ +V S + + + L +VKT + G+ IIG L +GN G ++ E++ ++ + V +E ++A GN I ND +A H D+D T E I VLGV V R T++G VG Sbjct: 1 MIRTLAYEGDPHIGIFTRVLEDIAVVPPEASADYCAALKEALG--VTLVKTHVQGSSIIGSLVSGNSRGAIVSGLAYPDEIR----AIEEYREVMLLEGSMNAAGNVILANDQMAAVHPDMDNATIEQIHSVLGVPVIRLTLSGIKTVG 143
BLAST of FC920332 vs. ExPASy Swiss-Prot
Match: IF6_METBF (Translation initiation factor 6 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=eif6 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.029e-12 Identity = 48/137 (35.04%), Postives = 69/137 (50.36%), Query Frame = 2 Query: 233 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGYILVG 643 +GVF+ T LV G + E L +V+T + G+ +IG L GN NG L + T E++ L V + + +L+A+GN + ND AL H +L + E+IA L VEV+R TIAG VG Sbjct: 13 IGVFATCTEDVVLVPTGTKPETCAILEDSLDA--RIVETLVNGSVVIGALSRGNSNGFLYSYGTDAGEMKELTG-----VEAEILPGKLNAVGNIVLANDSAALVHPELSDKAIEVIASTLKVEVYRGTIAGIKNVG 142
BLAST of FC920332 vs. ExPASy Swiss-Prot
Match: IF6_METTH (Translation initiation factor 6 OS=Methanobacterium thermoautotrophicum GN=eif6 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.956e-12 Identity = 47/150 (31.33%), Postives = 76/150 (50.67%), Query Frame = 2 Query: 197 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGYILVGS 646 M R+ + +GV+ +T++ L+ E F L V+K SI G+ + G L GN NG ++ + D+E+ L + + V RI ER +A+GN + ND+ A+ L + ++I DVL V+V T+AG +VGS Sbjct: 1 MIRRINLSGNPNLGVYISVTDSVALIPQNTPEKFEGVLREALE--VEVLKVSISGSSLNGALAVGNSNGFVVSNQAMDREIDALAAAGVEAV---RIPERFTAVGNLVLANDNGAVASPLLSDDALQVIGDVLEVDVKVSTLAGLNIVGS 145
BLAST of FC920332 vs. ExPASy Swiss-Prot
Match: IF6_METKA (Translation initiation factor 6 OS=Methanopyrus kandleri GN=eif6 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.748e-12 Identity = 46/138 (33.33%), Postives = 70/138 (50.72%), Query Frame = 2 Query: 233 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGYILVGS 646 +G + + Y +VA + + E DV VV+T++ G+ ++G L A N NG L P + E++ +R V V + +++A+GN + NDH AL H DLD E+I VLG V R + G VGS Sbjct: 14 IGAWIAASEEYAVVAPKVPDDIVERVK-EALDV-EVVRTTVAGSNLVGALLAVNSNGALFPRHAREHEIRVVREL---GVEVDVLPSKMNAVGNLVLTNDHGALVHPDLDDHALEVIESVLGGRVVRGELGGVKTVGS 146
BLAST of FC920332 vs. ExPASy Swiss-Prot
Match: IF6_METAC (Translation initiation factor 6 OS=Methanosarcina acetivorans GN=eif6 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11 Identity = 49/137 (35.77%), Postives = 72/137 (52.55%), Query Frame = 2 Query: 233 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGYILVG 643 +GVF+ T LV + E E+ DV V++T + G+ ++G L GN NG +LP+ E+Q + + V + +RL+A+GN + ND AL H DL + E IA L V+V+R TIAG VG Sbjct: 13 IGVFATCTEDVVLVPPLTKPEVCALLE-EVLDV-RVIETLVNGSIVVGALSRGNSNGFMLPYGAR-AEMQRFTD-----IPVGILPDRLNAVGNIVFANDSAALVHPDLSDKALEAIARTLKVDVYRGTIAGIKNVG 141 The following BLAST results are available for this feature:
BLAST of FC920332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920332 ID=FC920332; Name=FC920332; organism=Citrus clementina; type=EST; length=660bpback to top |