FC920333

Overview
NameFC920333
Unique NameFC920333
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920333 vs. ExPASy Swiss-Prot
Match: LGUL_HAEIN (Lactoylglutathione lyase OS=Haemophilus influenzae GN=gloA PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.525e-34
Identity = 69/132 (52.27%), Postives = 91/132 (68.94%), Query Frame = 3
Query:  156 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPL 551
            ++LH + RVGDLDR+IK+Y +  GM LLR  + PE KY+ AFLG+   +S   +ELTYN+GV  Y+ GT +GH+AI  +D+Y   E +RA GGNVTRE GP+KG +T  AFV+DPDGY  E I+   T   L
Sbjct:    2 QILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFVEDPDGYKIEFIENKSTKSGL 133          

HSP 2 Score: 68.1662 bits (165), Expect = 5.383e-11
Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 3
Query:  549 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYAV 731
            +   MLRVGDL RSIKFY+  LGM+LLRT ++PE K  LA LGY + +    +EL Y++ V
Sbjct:    3 ILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGV 63          
BLAST of FC920333 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMB (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup B GN=gloA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.988e-31
Identity = 58/125 (46.40%), Postives = 88/125 (70.40%), Query Frame = 3
Query:  156 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR 530
            RLLH + RVG+L++++ +Y    GM+LLR++D PE +++ AF+G+G E    V+ELT+N+    YD+G  +GH+A+  +D Y+  E ++ +GGNV RE GP+K  TT  AFV+DPDGY  E IQ+
Sbjct:    2 RLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQK 126          
BLAST of FC920333 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMA (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup A GN=gloA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.988e-31
Identity = 58/125 (46.40%), Postives = 88/125 (70.40%), Query Frame = 3
Query:  156 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQR 530
            RLLH + RVG+L++++ +Y    GM+LLR++D PE +++ AF+G+G E    V+ELT+N+    YD+G  +GH+A+  +D Y+  E ++ +GGNV RE GP+K  TT  AFV+DPDGY  E IQ+
Sbjct:    2 RLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQK 126          
BLAST of FC920333 vs. ExPASy Swiss-Prot
Match: LGUL_YEAST (Lactoylglutathione lyase OS=Saccharomyces cerevisiae GN=GLO1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.393e-21
Identity = 74/227 (32.60%), Postives = 107/227 (47.14%), Query Frame = 3
Query:  159 LLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPE-------------QSYFVVELTYNYGV---TSYDIGT-------GFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELI---------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYA--EEDQT----TVLELAYSY 725
            L H   RV D  RT+K+YTE FGM+LL ++D  E K+S  FL F  +              ++ V+ELT+N+G      Y I         GFGH+  +  D+ K  E + ++G    +     +G     AF   PDGY  ELI          +G         M+R+ +  RS++FY+  LGMKLLRT +    K  L  LGY   + D      +VLEL +++
Sbjct:   23 LNHTCLRVKDPARTVKFYTEHFGMKLLSRKDFEEAKFSLYFLSFPKDDIPKNKNGEPDVFSAHGVLELTHNWGTEKNPDYKINNGNEEPHRGFGHICFSVSDINKTCEELESQGVKFKKRLS--EGRQKDIAFALGPDGYWIELITYSREGQEYPKGSVGNKFNHTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGYGVPKTDSVFSCESVLELTHNW 247          

HSP 2 Score: 70.0922 bits (170), Expect = 1.417e-11
Identity = 47/151 (31.13%), Postives = 78/151 (51.66%), Query Frame = 3
Query:  132 EWPKKDK-RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ--SYF----VVELTYNYGVTS-----YDIGT----GFGHLAIATEDVYKMVENIRAK-GGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG 533
            E+PK     +  H + R+ +  R++++Y    GM+LLR  +    K++  FLG+G  +  S F    V+ELT+N+G  +     Y  G     G+GH+ I+ +D   + + I  K G  +   P   +G   + AF+KDPDGY  E++  G
Sbjct:  173 EYPKGSVGNKFNHTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGYGVPKTDSVFSCESVLELTHNWGTENDPNFHYHNGNSEPQGYGHICISCDDAGALCKEIEVKYGDKIQWSPKFNQGRMKNIAFLKDPDGYSIEVVPHG 323          
BLAST of FC920333 vs. ExPASy Swiss-Prot
Match: GLOD4_RAT (Glyoxalase domain-containing protein 4 OS=Rattus norvegicus GN=Glod4 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.669e-20
Identity = 61/191 (31.94%), Postives = 95/191 (49.74%), Query Frame = 3
Query:  153 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-----------KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT-PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE 689
            RR LH V++VG+  +T+ ++ +  GM++LR  +  E            K+S   +GFGPE  +FV ELTYNYG+  Y +G  F  L +A+               N  R   PL  +       + P GY F L  R P+  +P+ +V L V DL +S+ ++   LGMK+    +  +     A+LGYA++
Sbjct:    4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGIGDYKLGNDFMGLTLASSQAV----------SNARRLEWPLSKVAEGVFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKK----WALLGYADD 180          
BLAST of FC920333 vs. ExPASy Swiss-Prot
Match: GLOD4_MOUSE (Glyoxalase domain-containing protein 4 OS=Mus musculus GN=Glod4 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.371e-19
Identity = 58/190 (30.53%), Postives = 93/190 (48.95%), Query Frame = 3
Query:  153 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-----------KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPT-PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAE 686
            RR LH V++V +  +T+ ++ +  GM++LR  +  E            K+S   +GFGPE  +FV ELTYNYG+  Y +G  F  + +A+               N  +   PL  +       + P GY F L  R P+  +P+ +V L V DL +S+ ++   LGMK+    +  +     A+LGYA+
Sbjct:    4 RRALHFVFKVKNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGIGDYKLGNDFMGITLASSQAV----------SNARKLEWPLSKVAEGIFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKQ----RALLGYAD 179          
BLAST of FC920333 vs. ExPASy Swiss-Prot
Match: LGUL_SCHPO (Lactoylglutathione lyase OS=Schizosaccharomyces pombe GN=glo1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.196e-18
Identity = 72/222 (32.43%), Postives = 110/222 (49.55%), Query Frame = 3
Query:  156 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGF--------GPEQS--YFVVELTYNYGVTS-----YDIGT-----GFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQV--------MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE----DQTTVLELAYSY 725
            +L H + RV DLD+++K+YTE FGM+L+ +    E ++S +FL F        G E+S    ++ELTYN+G        Y  G      GFGH+    +++      + +KG +  ++     G   H AF  DPD Y  EL+ +  T +P   +        M+RV D   SI FYEK LGMK++   D P  K     L Y  +    D+  +LEL +++
Sbjct:   11 KLNHTMIRVKDLDKSLKFYTEVFGMKLIDQWVFEENEFSLSFLAFDGPGALNHGVERSKREGILELTYNFGTEKKEGPVYINGNTEPKRGFGHICFTVDNIESACAYLESKGVSFKKKLS--DGKMKHIAFALDPDNYWIELVSQSET-KPKANISNFRFNHTMVRVKDPEPSIAFYEK-LGMKVIDKADHPNGKFTNYFLAYPSDLPRHDREGLLELTHNW 228          
BLAST of FC920333 vs. ExPASy Swiss-Prot
Match: GLOD4_CAEBR (Glyoxalase 1 OS=Caenorhabditis briggsae GN=glod-4 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.120e-16
Identity = 50/169 (29.59%), Postives = 89/169 (52.66%), Query Frame = 3
Query:  156 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP-----------EEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 629
            R LH V++V +  +TI +YT+   M++LR  +             +E++S   +G+G E  +FV+ELTYNY +  Y++G  +  + I ++ ++  +  I  +     R              VKDPDG+ F++ +    P+ L +V L VGDL +S K++ + LGM ++
Sbjct:    4 RALHYVFKVANRAKTIDFYTKILEMKVLRHEEFDKGCEASCNGPYDERWSKTMIGYGSEDEHFVLELTYNYPIHKYELGNDYRAIVIDSDQLFDKISRIDHRKSGCGR------------LAVKDPDGHEFKIGKADHAPKVL-RVQLNVGDLEKSKKYWNELLGMGIV 159          
BLAST of FC920333 vs. ExPASy Swiss-Prot
Match: GLOD4_CAEEL (Glyoxalase 1 OS=Caenorhabditis elegans GN=glod-4 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.910e-16
Identity = 48/169 (28.40%), Postives = 90/169 (53.25%), Query Frame = 3
Query:  156 RLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-----------KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 629
            R LH V++V +  +TI ++T    M++LR  +  +            ++S   +G+G E  +FV+E+TYNY +  Y++G  +  + I ++ +++ VE I  +     R              VKDPDG+ F++ +   +P+ L +V + VGDL +S K++ + LGM ++
Sbjct:    4 RALHYVFKVANRAKTIDFFTNVLNMKVLRHEEFEKGCEATCNGPYNGRWSKTMIGYGSEDEHFVLEITYNYPIHKYELGNDYRAIVIDSDQLFEKVEKINHRKSGCGR------------LAVKDPDGHEFKIGKADQSPKVL-RVQVNVGDLEKSKKYWNETLGMPIV 159          
BLAST of FC920333 vs. ExPASy Swiss-Prot
Match: GLOD4_HUMAN (Glyoxalase domain-containing protein 4 OS=Homo sapiens GN=GLOD4 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15
Identity = 59/205 (28.78%), Postives = 90/205 (43.90%), Query Frame = 3
Query:  153 RRLLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--------------------------KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDVYKMVENIRAKGGNVTREPGPLKGMTTHFAFVKDPDGYIFELIQRG-PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAE 686
            RR LH V++VG+  +T ++Y +  GM++        E                          K+S   +GFGPE  +FV ELTYNYGV  Y +G  F  + +A+               N  +   PL  +       + P GY F L  R  P  +P+ +V L V DL +S+ ++   LGMK+    +  +     A+LGYA+
Sbjct:    4 RRALHFVFKVGNRFQTARFYRDVLGMKVESCSVARLECSGAISAHCSDYTRITEDSFSKPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQAV----------SNARKLEWPLTEVAEGVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIYEKDEEKQ----RALLGYAD 194          
The following BLAST results are available for this feature:
BLAST of FC920333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
LGUL_HAEIN4.525e-3452.27Lactoylglutathione lyase OS=Haemophilus influenzae... [more]
LGUL_NEIMB7.988e-3146.40Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_NEIMA7.988e-3146.40Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_YEAST4.393e-2132.60Lactoylglutathione lyase OS=Saccharomyces cerevisi... [more]
GLOD4_RAT1.669e-2031.94Glyoxalase domain-containing protein 4 OS=Rattus n... [more]
GLOD4_MOUSE5.371e-1930.53Glyoxalase domain-containing protein 4 OS=Mus musc... [more]
LGUL_SCHPO1.196e-1832.43Lactoylglutathione lyase OS=Schizosaccharomyces po... [more]
GLOD4_CAEBR1.120e-1629.59Glyoxalase 1 OS=Caenorhabditis briggsae GN=glod-4 ... [more]
GLOD4_CAEEL1.910e-1628.40Glyoxalase 1 OS=Caenorhabditis elegans GN=glod-4 P... [more]
GLOD4_HUMAN4.705e-1528.78Glyoxalase domain-containing protein 4 OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionC32007A03EF RVDevelop1 Citrus clementina cDNA clone C32007A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920333 ID=FC920333; Name=FC920333; organism=Citrus clementina; type=EST; length=738bp
GATAGCTAAGTCTGGAAAATAGATCATCTTCTAGATCATTTCTCACACTT
GCGGCTTCACTCCGACTTTCTGAGTGATTCCATATCAAAATGGCTGAGGC
TTCTCCTGCTGTTGCTAATGCCGAGTTGCTGGAATGGCCAAAGAAAGATA
AGCGACGCCTCCTTCATGCTGTGTATCGTGTTGGTGATCTTGATCGCACC
ATCAAATATTACACTGAATGCTTTGGGATGGAGCTGTTGAGAAAGAGAGA
CGTCCCAGAAGAGAAATACTCAAATGCCTTTCTTGGATTTGGCCCCGAAC
AGTCTTACTTTGTTGTGGAGTTAACATACAACTATGGTGTAACTTCATAT
GATATTGGAACTGGTTTTGGCCATCTTGCAATTGCAACTGAAGATGTTTA
CAAAATGGTTGAAAACATTCGTGCCAAGGGTGGCAATGTGACTAGAGAGC
CTGGTCCACTTAAAGGTATGACAACTCACTTTGCCTTTGTGAAGGATCCC
GATGGTTATATTTTTGAACTCATCCAGAGAGGTCCAACTCCTGAACCACT
CTGTCAAGTAATGCTTCGCGTTGGCGATCTTGGTCGCTCCATCAAGTTCT
ATGAAAAGGCTTTGGGGATGAAACTGTTAAGGACAATTGATAGTCCTGAA
TTGAAGTGCGCCCTGGCCATGCTTGGATATGCTGAGGAAGATCAGACTAC
TGTTCTGGAGTTAGCTTATAGTTATGCTGTGACTGAAT
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