FC920336
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920336 vs. ExPASy Swiss-Prot
Match: AATC_MOUSE (Aspartate aminotransferase, cytoplasmic OS=Mus musculus GN=Got1 PE=1 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 1.028e-54 Identity = 108/216 (50.00%), Postives = 143/216 (66.20%), Query Frame = 3 Query: 57 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSK 686 M SVF ++ +AP + +T + D P K+NLGVGAYRT+E +P VL VVRK EQ + ND S EYLPI+GL +F +++L+LG +SPAI++NRV VQ L GTG+LR+GA+FL R Y+ IY+ PTW NH VF+ AG ++ Y Y+D RGL+ QG L DL AP +I +LHACAHNPTG DPT EQW+QI +M+ + Sbjct: 1 MAPPSVFAQVPQAPPVLVFKLTADFRDDPDPRKVNLGVGAYRTDESQPWVLPVVRKVEQKIANDNSLNHEYLPILGLAEFRSCASRLVLGDNSPAIRENRVGGVQSLGGTGALRIGADFLGRWYNGTDNKNTPIYVSSPTWENHNAVFSAAGFKDIRPYCYWDAEKRGLDLQGFLNDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIAAVMQRR 216
BLAST of FC920336 vs. ExPASy Swiss-Prot
Match: AATM_PIG (Aspartate aminotransferase, mitochondrial OS=Sus scrofa GN=GOT2 PE=1 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.343e-54 Identity = 103/212 (48.58%), Postives = 145/212 (68.40%), Query Frame = 3 Query: 63 SESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKDCY 695 + S + + P DPILGVT A+ +DT+ K+NLGVGAYR + GKP VL VRKAE + ++ KEYLPI GL +F K SA+L LG ++ +K R TVQ +SGTG+LR+GA FL R + +++P+P+WGNH +F AG+ + +YRYYDP T G +F G LED+ P+ +++LLHACAHNPTGVDP EQW+++ L++ + + Sbjct: 29 ASSWWAHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA-KNLDKEYLPIGGLAEFCKASAELALGENNEVLKSGRYVTVQTISGTGALRIGANFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLHSYRYYDPKTCGFDFTGALEDISKIPAQSVILLHACAHNPTGVDPRPEQWKEMATLVKKNNLF 239
BLAST of FC920336 vs. ExPASy Swiss-Prot
Match: AATM_HUMAN (Aspartate aminotransferase, mitochondrial OS=Homo sapiens GN=GOT2 PE=1 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.343e-54 Identity = 103/201 (51.24%), Postives = 141/201 (70.15%), Query Frame = 3 Query: 96 PEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKDCY 695 P DPILGVT A+ +DT+ K+NLGVGAYR + GKP VL VRKAE + ++ KEYLPI GL +F K SA+L LG +S +K R TVQ +SGTG+LR+GA FL R + +++P+PTWGNH +F AG+ ++ YRYYDP T G +F G +ED+ P +++LLHACAHNPTGVDP EQW++I +++ ++ + Sbjct: 40 PPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA-KNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLF 239
BLAST of FC920336 vs. ExPASy Swiss-Prot
Match: AATC_CHICK (Aspartate aminotransferase, cytoplasmic OS=Gallus gallus GN=GOT1 PE=1 SV=3) HSP 1 Score: 213.001 bits (541), Expect = 1.343e-54 Identity = 107/212 (50.47%), Postives = 143/212 (67.45%), Query Frame = 3 Query: 69 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSK 686 S+F + RAP + +T + +D K+NLGVGAYRT+EG+P VL VVRK EQL+ D S EYLPI+GL +F ++++ LG DSPAI RV +VQ L GTG+LR+GAEFL R Y+ +Y+ PTW NH VF AG ++TYRY+D A RGL+ QGLL+D+ AP +I +LHACAHNPTG DPT ++W+QI +M+ + Sbjct: 4 SIFAAVPRAPPVAVFKLTADFREDGDSRKVNLGVGAYRTDEGQPWVLPVVRKVEQLIAGDGSLNHEYLPILGLPEFRANASRIALGDDSPAIAQKRVGSVQGLGGTGALRIGAEFLRRWYNGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTYRYWDAAKRGLDLQGLLDDMEKAPEFSIFILHACAHNPTGTDPTPDEWKQIAAVMKRR 215
BLAST of FC920336 vs. ExPASy Swiss-Prot
Match: AATC_MACFA (Aspartate aminotransferase, cytoplasmic OS=Macaca fascicularis GN=GOT1 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.754e-54 Identity = 106/216 (49.07%), Postives = 144/216 (66.67%), Query Frame = 3 Query: 57 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSK 686 M SVF ++ +A + +T + +D P K+NLGVGAYRT++ P VL VV+K EQ + ND S EYLPI+GL +F +++L LG DSPA+K+ RV VQ L GTG+LR+GA+FLAR Y+ +Y+ PTW NH VF+ AG +++YRY+D RGL+ QG L DL AP +I++LHACAHNPTG DPT EQW+QI +M+ + Sbjct: 1 MAPPSVFSEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIIVLHACAHNPTGTDPTPEQWKQIASVMKHR 216
BLAST of FC920336 vs. ExPASy Swiss-Prot
Match: AATM_PONAB (Aspartate aminotransferase, mitochondrial OS=Pongo abelii GN=GOT2 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.907e-54 Identity = 102/201 (50.75%), Postives = 141/201 (70.15%), Query Frame = 3 Query: 96 PEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKDCY 695 P DPILGVT A+ +DT+ K+NLGVGAYR + GKP VL VRKAE + ++ KEYLPI GL +F K SA+L LG +S +K R TVQ +SGTG+LR+GA FL R + +++P+P+WGNH +F AG+ ++ YRYYDP T G +F G +ED+ P +++LLHACAHNPTGVDP EQW++I +++ ++ + Sbjct: 40 PPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA-KNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLF 239
BLAST of FC920336 vs. ExPASy Swiss-Prot
Match: AATM_MACFA (Aspartate aminotransferase, mitochondrial OS=Macaca fascicularis GN=GOT2 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.907e-54 Identity = 102/201 (50.75%), Postives = 141/201 (70.15%), Query Frame = 3 Query: 96 PEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKDCY 695 P DPILGVT A+ +DT+ K+NLGVGAYR + GKP VL VRKAE + ++ KEYLPI GL +F K SA+L LG +S +K R TVQ +SGTG+LR+GA FL R + +++P+P+WGNH +F AG+ ++ YRYYDP T G +F G +ED+ P +++LLHACAHNPTGVDP EQW++I +++ ++ + Sbjct: 40 PPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA-KNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLF 239
BLAST of FC920336 vs. ExPASy Swiss-Prot
Match: AATC_PIG (Aspartate aminotransferase, cytoplasmic OS=Sus scrofa GN=GOT1 PE=1 SV=3) HSP 1 Score: 211.075 bits (536), Expect = 5.103e-54 Identity = 107/216 (49.54%), Postives = 143/216 (66.20%), Query Frame = 3 Query: 57 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSK 686 M SVF ++ +A + + + +D P K+NLGVGAYRT++ +P VL VVRK EQ + ND S EYLPI+GL +F +++L LG DSPA+++ RV VQ L GTG+LR+GAEFLAR Y+ +Y+ PTW NH VFT AG +++YRY+D RGL+ QG L DL AP +I +LHACAHNPTG DPT EQW+QI +M+ + Sbjct: 1 MAPPSVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANDSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRR 216
BLAST of FC920336 vs. ExPASy Swiss-Prot
Match: AATC_RAT (Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus GN=Got1 PE=1 SV=3) HSP 1 Score: 209.149 bits (531), Expect = 1.939e-53 Identity = 103/216 (47.69%), Postives = 143/216 (66.20%), Query Frame = 3 Query: 57 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSK 686 M S F ++ +AP + + + D P K+NLGVGAYRT++ +P VL VVRK EQ + ND S EYLPI+GL +F +++L+LG +SPA+++NRV VQ L GTG+LR+GA+FL R Y+ +Y+ PTW NH VF+ AG +++YRY+D RGL+ QG L DL AP +I +LHACAHNPTG DPT E+W+QI +M+ + Sbjct: 1 MAPPSFFAQVPQAPPVLVFKLIADFRDDPDPRKVNLGVGAYRTDDSQPWVLPVVRKVEQKIANDHSLNHEYLPILGLAEFRSCASQLVLGDNSPALRENRVGGVQSLGGTGALRIGADFLGRWYNGTDNKNTPVYVSSPTWENHNGVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIFVLHACAHNPTGTDPTEEEWKQIAAVMKRR 216
BLAST of FC920336 vs. ExPASy Swiss-Prot
Match: AATC_HORSE (Aspartate aminotransferase, cytoplasmic OS=Equus caballus GN=GOT1 PE=1 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 7.368e-53 Identity = 104/216 (48.15%), Postives = 144/216 (66.67%), Query Frame = 3 Query: 57 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSK 686 M S S+F ++ +A + +T + +D P K+NLGVGAYRT++ +P VL VVRK EQ + N+ S EYLPI+GL +F +++L LG DSPA+++ RV VQ L GTG+LR+GAEFL+R Y+ +Y+ PTW NH VF+ AG +++Y Y+D RGL+ QG L DL AP +I +LHACAHNPTG DPT EQW+QI +M+ + Sbjct: 1 MTSPSIFVEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQKIANNSSLNHEYLPILGLAEFRSCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLSRWYNGTNNKNTPVYVSSPTWENHNGVFSGAGFKDIRSYHYWDATKRGLDLQGFLNDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRR 216 The following BLAST results are available for this feature:
BLAST of FC920336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920336 ID=FC920336; Name=FC920336; organism=Citrus clementina; type=EST; length=734bpback to top |