FC920341

Overview
NameFC920341
Unique NameFC920341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14123 contig Ccv1_Contig14123:1..672. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL73_ARATH (GDSL esterase/lipase At5g03820 OS=Arabidopsis thaliana GN=At5g03820 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.773e-31
Identity = 71/164 (43.29%), Postives = 103/164 (62.80%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNY 653
            A  + GDS+VD+GNNN L T  +A+ PPYG DF  H  TGRFSNG    D  ++ +G +  P+PYLS E NG  LL GANFAS   G  + T I F N I + +QL  + EYQ +V+ ++G+++A ++ + A+ L++ G +DF+ +YY+ P    +R FT   Y
Sbjct:   30 ALIIMGDSVVDAGNNNRLNTLIKANFPPYGRDFLAHNATGRFSNGKLATDFTAESLGFTSYPVPYLSQEANGTNLLTGANFASGASGYDDGTAI-FYNAITLNQQLKNYKEYQNKVTNIVGSERANKIFSGAIHLLSTGSSDFLQSYYINP--ILNRIFTPDQY 190          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL66_ARATH (GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana GN=At4g26790 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.501e-30
Identity = 67/173 (38.73%), Postives = 110/173 (63.58%), Query Frame = 3
Query:  150 AEARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYII 668
            A+  A  VFGDS VDSGNNN ++T  +++  PYG D+   + TGRFSNG   PD IS+ +G   A   YL P  N      G  FASAG G+ N T    ++++ ++++++Y+ EYQ R+ + +G ++A ++++ +L LI++G NDF+ NYYL+P   + R++++  Y  ++I
Sbjct:   25 AKFPALIVFGDSTVDSGNNNQISTVLKSNFQPYGRDYFDGKATGRFSNGRIAPDFISEGLGLKNAVPAYLDPAYNIADFATGVCFASAGTGLDNATS-AVLSVMPLWKEVEYYKEYQTRLRSYLGEEKANEIISESLYLISIGTNDFLENYYLLP--RKLRKYSVNEYQYFLI 194          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL80_ARATH (GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana GN=At5g37690 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.560e-30
Identity = 74/169 (43.79%), Postives = 104/169 (61.54%), Query Frame = 3
Query:  168 FVFGDSLVDSGNNNYLA-TTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIIS 671
            ++FGDSL + GNNN+L  + ARAD P YG+DF   + TGRF+NG  I DIIS ++G    P PYLS   N    L G N+AS G GILN+TGI F+  +    Q++ F + +  + A IG   A + VN A+  I +G ND+VNN +L P+ A  +Q+T   +V+ + S
Sbjct:   29 YIFGDSLTEVGNNNFLQYSLARADFPYYGVDFSGGKATGRFTNGRTIGDIISTKLGILSPP-PYLSLSQNDDAFLSGINYASGGAGILNETGIYFIQRLTFNDQINCFKKTKEVIRAKIGDGAANKHVNDAMYFIGLGSNDYVNN-FLQPFMADGQQYTHDEFVELLTS 195          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL72_ARATH (GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.366e-30
Identity = 68/169 (40.24%), Postives = 103/169 (60.95%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYII 668
            A  + GDS+VD+GNNN+  T  +A+ PPYG DF  H  TGRFSNG    D  ++ +G +  P+ YLS E N   LL GANFAS   G  + T I F N I + +QL  + EYQ +V+ ++G ++A ++ + A+ L++ G +DF+ +YY+ P    +R FT   Y  +++
Sbjct:   30 ALIIMGDSVVDAGNNNHRITLVKANFPPYGRDFVAHSATGRFSNGKLATDFTAENLGFTSYPVAYLSQEANETNLLTGANFASGASGFDDATAI-FYNAITLSQQLKNYKEYQNKVTNIVGKERANEIFSGAIHLLSTGSSDFLQSYYINP--ILNRIFTPDQYSDHLL 195          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL23_ARATH (GDSL esterase/lipase At1g58430 OS=Arabidopsis thaliana GN=At1g58430 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.702e-30
Identity = 75/188 (39.89%), Postives = 110/188 (58.51%), Query Frame = 3
Query:  129 LGSIVRLAEAR------AFFVFGDSLVDSGNNNYLATTA-RADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIIS 671
            LGS    A+A+      A  +FGDS VD+GNNNY + T  RA   PYGID P H P GRFSNG    DII+ ++   +   P+L P L  Q ++ G  FASAG G  + T +     IR+  Q + F  Y  R+ +++G ++A +++N ALV+++ G NDF+ NYY VP S R    ++ +Y  +++S
Sbjct:   18 LGSCNASAKAKTQPLFPAILIFGDSTVDTGNNNYPSQTIFRAKHVPYGIDLPNHSPNGRFSNGKIFSDIIATKLNIKQFVPPFLQPNLTDQEIVTGVCFASAGAGYDDQTSLT-TQAIRVSEQPNMFKSYIARLKSIVGDKKAMKIINNALVVVSAGPNDFILNYYEVP-SWRRMYPSISDYQDFVLS 203          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL1_ARATH (GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana GN=At1g06990 PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 7.447e-30
Identity = 69/170 (40.59%), Postives = 102/170 (60.00%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIIS 671
            A  VFGDS +D+GNNNY+ T  RA+ PPYG +FP H  TGRFSNG  IPD I+  +G  +   P+L P L+   ++ G  FASAG G  N T  +  + + + +Q D    Y  R+S ++G ++A  +V+ ALV+++ G NDF  N Y  P  +R ++  +  Y  +I+S
Sbjct:   37 AILVFGDSTIDTGNNNYIKTYIRANFPPYGCNFPGHNATGRFSNGKLIPDFIASLMGIKDTVPPFLDPHLSDSDIITGVCFASAGSGYDNLTD-RATSTLSVDKQADMLRSYVERLSQIVGDEKAASIVSEALVIVSSGTNDFNLNLYDTP--SRRQKLGVDGYQSFILS 203          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL81_ARATH (GDSL esterase/lipase At5g41890 OS=Arabidopsis thaliana GN=At5g41890 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.726e-30
Identity = 69/171 (40.35%), Postives = 102/171 (59.65%), Query Frame = 3
Query:  150 AEARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDF-PTH-RPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYV 656
            A++   F+FGDSLVD GNNNY+ T ++AD+ PYGIDF P++ +PTGRF+NG  I DI+ + +G    P PYL P      +  G N+AS   GIL+DTG+ F+  + +  Q+  F + +  +  VIG    ++++  A+  IT+G ND +N  Y+ P      Q  LP  V
Sbjct:   21 AQSFTNFIFGDSLVDVGNNNYIFTLSKADSSPYGIDFAPSNGQPTGRFTNGRTISDIVGEALGAKSPPPPYLEPNTEANTIRNGINYASGAAGILDDTGLLFIGRVPLREQVSNFEKSREYMVRVIGENGTKEMLKNAMFTITIGSNDILN--YIQPSIPFFSQDKLPTDV 189          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL59_ARATH (GDSL esterase/lipase At3g53100 OS=Arabidopsis thaliana GN=At3g53100 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.404e-28
Identity = 66/151 (43.71%), Postives = 93/151 (61.59%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVP 614
            A  +FGDS+VD GNNN L +  +++  PYG DF   RPTGRF NG    D  ++ +G S  P  +LS E + + +LIGANFASA  G  + T + F   I + RQL Y+  YQ RV+ +IG   AR L +R + +++ G +DF+ NYY+ P
Sbjct:   29 ALIMFGDSIVDVGNNNNLLSIVKSNFLPYGRDFIDQRPTGRFCNGKLAVDFSAEYLGFSSYPPAFLSREASNENILIGANFASASSGYYDATSVPF-GSISLTRQLSYYRAYQNRVTRMIGRGNARILFSRGIHILSAGSSDFLQNYYINP 178          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL34_ARATH (GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.396e-28
Identity = 69/181 (38.12%), Postives = 103/181 (56.91%), Query Frame = 3
Query:  126 ALGSIVRLA-EARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYI 665
            A+ S V  A +  A  VFGDS VD+GNNNY+ T AR++  PYG DF   +PTGRF NG    D +S+ +G       YL P  N      G  FASA  G  N T    ++++ +++QL+Y+ EYQ ++ A  G  +  + +  +L LI++G NDF+ NY+  P   RS Q+++  Y  ++
Sbjct:   15 AMSSTVTFAGKIPAIIVFGDSSVDAGNNNYIPTVARSNFEPYGRDFVGGKPTGRFCNGKIATDFMSEALGLKPIIPAYLDPSYNISDFATGVTFASAATGYDNATS-DVLSVLPLWKQLEYYKEYQTKLKAYQGKDRGTETIESSLYLISIGTNDFLENYFAFP--GRSSQYSVSLYQDFL 192          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL78_ARATH (GDSL esterase/lipase At5g22810 OS=Arabidopsis thaliana GN=At5g22810 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.970e-28
Identity = 62/160 (38.75%), Postives = 95/160 (59.38%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGA---QQARQLVNRALVLITVGGNDFVNNYYLVPYSARSR 632
            A F+FGDS+VD GNNN + T  +A+ PPYG DF TH PTGRF NG    D  ++ +G    P  YLS +  G+ LLIGANFASA  G  + T  +  + I + +QL+++ +Y  R+  +  +     A  +++  + +++ G +DF+ NYY+ P   R +
Sbjct:   20 AIFIFGDSVVDVGNNNDIYTIVKANFPPYGRDFTTHTPTGRFCNGKLATDFTAENLGFKSYPQAYLSKKAKGKNLLIGANFASAASGYYDGTA-KLYSAISLPQQLEHYKDYISRIQEIATSNNNSNASAIISNGIYIVSAGSSDFIQNYYINPLLYRDQ 178          
The following BLAST results are available for this feature:
BLAST of FC920341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
GDL73_ARATH1.773e-3143.29GDSL esterase/lipase At5g03820 OS=Arabidopsis thal... [more]
GDL66_ARATH1.501e-3038.73GDSL esterase/lipase At4g26790 OS=Arabidopsis thal... [more]
GDL80_ARATH2.560e-3043.79GDSL esterase/lipase At5g37690 OS=Arabidopsis thal... [more]
GDL72_ARATH4.366e-3040.24GDSL esterase/lipase At5g03810 OS=Arabidopsis thal... [more]
GDL23_ARATH5.702e-3039.89GDSL esterase/lipase At1g58430 OS=Arabidopsis thal... [more]
GDL1_ARATH7.447e-3040.59GDSL esterase/lipase At1g06990 OS=Arabidopsis thal... [more]
GDL81_ARATH9.726e-3040.35GDSL esterase/lipase At5g41890 OS=Arabidopsis thal... [more]
GDL59_ARATH1.404e-2843.71GDSL esterase/lipase At3g53100 OS=Arabidopsis thal... [more]
GDL34_ARATH2.396e-2838.12GDSL esterase/lipase At2g04570 OS=Arabidopsis thal... [more]
GDL78_ARATH6.970e-2838.75GDSL esterase/lipase At5g22810 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32007A11EF RVDevelop1 Citrus clementina cDNA clone C32007A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920341 ID=FC920341; Name=FC920341; organism=Citrus clementina; type=EST; length=671bp
AATCCAAGAAGAGTATATATCCATATATCTAATTAGAGTTTCGAAACAAT
ATGTCAATGGCTATTGCGACTTCATCGGCATCAGTAGCAATGCGTTCTTG
GATGATGATTATTGGCATTGCATTTGCTTTAGGATCAATTGTTCGTCTTG
CTGAGGCTCGAGCTTTCTTCGTGTTTGGCGATTCACTCGTCGACAGCGGC
AACAACAACTACCTCGCCACGACTGCCCGTGCAGACGCGCCGCCTTATGG
GATTGATTTTCCTACTCACCGTCCCACAGGCCGTTTCTCCAATGGCTTCA
ACATCCCTGACATTATCAGTCAGAGAATTGGCCAATCGGAAGCCCCATTG
CCATACTTGAGTCCAGAACTCAATGGACAGAGACTGCTCATTGGTGCCAA
CTTCGCTTCAGCGGGAATTGGAATTCTCAATGACACCGGCATCCAATTTG
TAAACATAATTAGAATGTTCAGACAATTGGATTACTTCGCGGAGTACCAG
CGTCGAGTGAGTGCTGTCATTGGAGCCCAGCAAGCTCGCCAACTTGTAAA
CCGAGCACTAGTACTCATCACTGTCGGTGGCAATGATTTTGTGAATAACT
ATTACTTGGTTCCGTACTCTGCAAGATCTCGCCAATTCACTTTGCCCAAT
TATGTCAAGTATATCATCTCT
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