FC920341

Overview
NameFC920341
Unique NameFC920341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14123 contig Ccv1_Contig14123:1..672. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL28_ARATH (GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana GN=At1g71250 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.717e-26
Identity = 64/174 (36.78%), Postives = 101/174 (58.05%), Query Frame = 3
Query:  150 AEARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIIS 671
            A   A FV GDSLVD+GNNN+L T ARA+  PYGID   ++PTGRFSNG    D+++ R+ +  +P P+  P  +G R+L G N+ASA  GIL+ +G  +     + +Q+        ++  ++  Q     + R+LV++  G ND++NNY +      S +F  P++   ++S
Sbjct:   37 ARVPAMFVLGDSLVDAGNNNFLQTVARANFLPYGIDM-NYQPTGRFSNGLTFIDLLA-RLLEIPSPPPFADPTTSGNRILQGVNYASAAAGILDVSGYNYGGRFSLNQQMVNLETTLSQLRTMMSPQNFTDYLARSLVVLVFGSNDYINNYLMPNLYDSSIRFRPPDFANLLLS 208          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL65_ARATH (GDSL esterase/lipase At4g18970 OS=Arabidopsis thaliana GN=At4g18970 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.929e-26
Identity = 71/191 (37.17%), Postives = 108/191 (56.54%), Query Frame = 3
Query:  102 MMIIGIAFALGSIVRLAEARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQ-QARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIIS 671
            MM + IA A+   +    A  +F+FGDSLVDSGNNN L + ARA+  PYGIDF  + PTGRFSNG    D+I++ +G  +   PY   E  G+ +L G N+ASA  GI  +TG Q    I    Q+        +V  ++G + +A   +++ +  I +G ND++NNY++  Y +   Q++   Y   +I+
Sbjct:    8 MMAMAIAMAMNIAMGDPIAPCYFIFGDSLVDSGNNNRLTSLARANYFPYGIDF-QYGPTGRFSNGKTTVDVITELLGFDDYITPY--SEARGEDILRGVNYASAAAGIREETGRQLGARITFAGQVANHVNTVSQVVNILGDENEAANYLSKCIYSIGLGSNDYLNNYFMPVYYSTGSQYSPDAYANDLIN 195          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL4_ARATH (GDSL esterase/lipase At1g20120 OS=Arabidopsis thaliana GN=At1g20120 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 8.521e-26
Identity = 61/148 (41.22%), Postives = 86/148 (58.11%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYY 605
            A F FGDS++D+GNN+Y+ T  +A+  PYG++FP   PTGRF NG    D I+  IG       YL P L  + LL G +FAS G G    T I  V+ I M +QL YF EY  +V   +G ++A  ++++ L ++  G +D  N YY
Sbjct:   78 AIFAFGDSILDTGNNDYILTLIKANFLPYGMNFPDKVPTGRFCNGKIPSDFIADYIGVKPVVPAYLRPGLTQEDLLTGVSFASGGSGYDPLTPI-VVSAIPMSKQLTYFQEYIEKVKGFVGKEKAEHIISKGLAIVVAGSDDLANTYY 224          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL31_ARATH (GDSL esterase/lipase At1g74460 OS=Arabidopsis thaliana GN=At1g74460 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.113e-25
Identity = 68/169 (40.24%), Postives = 100/169 (59.17%), Query Frame = 3
Query:  168 FVFGDSLVDSGNNNYLATT-ARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLI-GANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYII 668
            F+FGDSL D GNN  L  + A A+ P YGIDF    P GRF+NG  + DII  +IG    P+ +L P +N   +L  G N+AS G GILN+TG  F+    +++Q++ F   Q  V A IG ++A +    A  ++ +G NDF+NN YL+P  + S ++    +V Y++
Sbjct:   25 FIFGDSLSDVGNNKNLPRSLATANLPFYGIDFGNGLPNGRFTNGRTVSDIIGDKIGLPR-PVAFLDPSMNEDVILENGVNYASGGGGILNETGGYFIQRFSLWKQIELFQGTQDVVVAKIGKKEADKFFQDARYVVALGSNDFINN-YLMPVYSDSWKYNDQTFVDYLM 191          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL15_ARATH (GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana GN=At1g29670 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.113e-25
Identity = 76/202 (37.62%), Postives = 114/202 (56.44%), Query Frame = 3
Query:   90 MRSWMMIIGIAFALGSIVRLAEARA----FFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVI----GAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIIS 671
            +  W +++ +    G  V  A+A+A    FFVFGDSLVD+GNNN L + AR++  PYGIDF    PTGRFSNG    D+I++ +G +     Y +  ++G+++L G N+ASA  GI  +TG Q    I    Q+     YQ  VS V+       +A   + R +  + +G ND++NNY++  + + SRQFT   Y   +IS
Sbjct:    5 LTKWCVVL-VLLCFGFSVVKAQAQAQVPCFFVFGDSLVDNGNNNGLISIARSNYFPYGIDF--GGPTGRFSNGKTTVDVIAELLGFNGYIPAYNT--VSGRQILSGVNYASAAAGIREETGRQLGQRISFSGQV---RNYQTTVSQVVQLLGDETRAADYLKRCIYSVGLGSNDYLNNYFMPTFYSSSRQFTPEQYANDLIS 198          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GLIP7_ARATH (GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.230e-24
Identity = 70/173 (40.46%), Postives = 98/173 (56.65%), Query Frame = 3
Query:  156 ARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYF-AEYQRRVSAVI-GAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYII 668
            A AFFVFGDSLVDSGNNNY+ T ARA+  PYGIDF    PTGRF NG  + D  +  +G    P PYLSP   GQ  L G N+ASA  GIL++TG  +        Q+  F    + R+          R+ + ++++ I +G ND++NNY +    + S+ ++  +Y   +I
Sbjct:   28 APAFFVFGDSLVDSGNNNYIPTLARANYFPYGIDFGF--PTGRFCNGRTVVDYGATYLGLPLVP-PYLSPLSIGQNALRGVNYASAAAGILDETGRHYGARTTFNGQISQFEITIELRLRRFFQNPADLRKYLAKSIIGINIGSNDYINNYLMPERYSTSQTYSGEDYADLLI 197          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL36_ARATH (GDSL esterase/lipase At2g19050 OS=Arabidopsis thaliana GN=At2g19050 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.675e-24
Identity = 69/191 (36.13%), Postives = 101/191 (52.88%), Query Frame = 3
Query:  102 MMIIGIAFALGSIVRLAEARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQ--RIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYII 668
            ++I   AFA            +FVFGDS+ D+GNNN L T+A+ +  PYGIDF    PTGRFSNG NIPDII++  R      P    SPE    +  IG N+AS G GI  +T      II   +Q+      +   S ++ A+   + +N+ L  I +G ND++NNY++      +++F+   Y   +I
Sbjct:   11 LVIATTAFATTEAALGQRVPCYFVFGDSVFDNGNNNVLNTSAKVNYSPYGIDF-ARGPTGRFSNGRNIPDIIAELMRFSDYIPPFTGASPE----QAHIGINYASGGGGIREETSQHLGEIISFKKQI------KNHRSMIMTAKVPEEKLNKCLYTINIGSNDYLNNYFMPAPYMTNKKFSFDEYADSLI 190          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: EXL1_ARATH (GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana GN=EXL1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.106e-24
Identity = 61/163 (37.42%), Postives = 91/163 (55.83%), Query Frame = 3
Query:  126 ALGSIVRLAEARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVP 614
            AL  I +     A  VFGDS+VD+GNN+ + T AR D  PYGIDF     TGRFSNG    DI+++ +G       Y +P L  + LL G  FAS G G +  T    V  I + +QL YF EY  ++  ++G ++ + ++  +L ++  G ND  N+++ +P
Sbjct:   40 ALVKIPKNTTVPAVIVFGDSIVDAGNNDDMITEARCDYAPYGIDFDGGVATGRFSNGKVPGDIVAEELGIKPNIPAYRNPNLKPEELLTGVTFASGGAGYVPLTTKIAVGGIPLPQQLIYFEEYIEKLKQMVGEKRTKFIIKNSLFVVICGSNDIANDFFTLP 202          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL35_ARATH (GDSL esterase/lipase At2g19010 OS=Arabidopsis thaliana GN=At2g19010 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.042e-23
Identity = 66/189 (34.92%), Postives = 105/189 (55.56%), Query Frame = 3
Query:  105 MIIGIAFALGSIVRLAEARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYL-VPYSARSRQFTLPNYVKYII 668
            ++  I F   ++V   +A  FFVFGDS+ D+GNNN L + A+ +  PYG DFP   PTGRFSNG  IPDII +  G  +   P+   E + ++   G N+AS G G+  +T     + I + +QL      Q   +++  A    + + + L +I +G ND++NNY++  PY+ + R++T   Y   +I
Sbjct:    7 LVAAIIFTAATVVYGQQAPCFFVFGDSMSDNGNNNNLKSEAKVNFSPYGNDFP-KGPTGRFSNGRTIPDIIGELSGFKDFIPPF--AEASPEQAHTGMNYASGGSGLREETSEHLGDRISIRKQL------QNHKTSITKANVPAERLQQCLYMINIGSNDYINNYFMSKPYNTK-RRYTPKQYAYSLI 185          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL29_ARATH (GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana GN=At1g71691 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.320e-23
Identity = 67/158 (42.41%), Postives = 92/158 (58.23%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQA-RQLVNRALVLITVGGNDFVNNYYLVPYSARSR 632
            A FVFGDSL+D+GNNN + + A+A+  PYGIDF    PTGRF NG  + D I+Q +G    PL     E  G ++L G N+ASA  GIL DTG  FV  I   +Q+  F     +V++  G   A    V R+L  I +G ND++NNY +  +  R++
Sbjct:   55 ALFVFGDSLIDNGNNNNIPSFAKANYFPYGIDF-NGGPTGRFCNGLTMVDGIAQLLG---LPLIPAYSEATGDQVLRGVNYASAAAGILPDTGGNFVGRIPFDQQIHNFETTLDQVASKSGGAVAIADSVTRSLFFIGMGSNDYLNNYLMPNFPTRNQ 208          
The following BLAST results are available for this feature:
BLAST of FC920341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
GDL28_ARATH1.717e-2636.78GDSL esterase/lipase At1g71250 OS=Arabidopsis thal... [more]
GDL65_ARATH2.929e-2637.17GDSL esterase/lipase At4g18970 OS=Arabidopsis thal... [more]
GDL4_ARATH8.521e-2641.22GDSL esterase/lipase At1g20120 OS=Arabidopsis thal... [more]
GDL31_ARATH1.113e-2540.24GDSL esterase/lipase At1g74460 OS=Arabidopsis thal... [more]
GDL15_ARATH1.113e-2537.62GDSL esterase/lipase At1g29670 OS=Arabidopsis thal... [more]
GLIP7_ARATH1.230e-2440.46GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=... [more]
GDL36_ARATH4.675e-2436.13GDSL esterase/lipase At2g19050 OS=Arabidopsis thal... [more]
EXL1_ARATH6.106e-2437.42GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana ... [more]
GDL35_ARATH1.042e-2334.92GDSL esterase/lipase At2g19010 OS=Arabidopsis thal... [more]
GDL29_ARATH2.320e-2342.41GDSL esterase/lipase At1g71691 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32007A11EF RVDevelop1 Citrus clementina cDNA clone C32007A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920341 ID=FC920341; Name=FC920341; organism=Citrus clementina; type=EST; length=671bp
AATCCAAGAAGAGTATATATCCATATATCTAATTAGAGTTTCGAAACAAT
ATGTCAATGGCTATTGCGACTTCATCGGCATCAGTAGCAATGCGTTCTTG
GATGATGATTATTGGCATTGCATTTGCTTTAGGATCAATTGTTCGTCTTG
CTGAGGCTCGAGCTTTCTTCGTGTTTGGCGATTCACTCGTCGACAGCGGC
AACAACAACTACCTCGCCACGACTGCCCGTGCAGACGCGCCGCCTTATGG
GATTGATTTTCCTACTCACCGTCCCACAGGCCGTTTCTCCAATGGCTTCA
ACATCCCTGACATTATCAGTCAGAGAATTGGCCAATCGGAAGCCCCATTG
CCATACTTGAGTCCAGAACTCAATGGACAGAGACTGCTCATTGGTGCCAA
CTTCGCTTCAGCGGGAATTGGAATTCTCAATGACACCGGCATCCAATTTG
TAAACATAATTAGAATGTTCAGACAATTGGATTACTTCGCGGAGTACCAG
CGTCGAGTGAGTGCTGTCATTGGAGCCCAGCAAGCTCGCCAACTTGTAAA
CCGAGCACTAGTACTCATCACTGTCGGTGGCAATGATTTTGTGAATAACT
ATTACTTGGTTCCGTACTCTGCAAGATCTCGCCAATTCACTTTGCCCAAT
TATGTCAAGTATATCATCTCT
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