FC920341

Overview
NameFC920341
Unique NameFC920341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14123 contig Ccv1_Contig14123:1..672. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL52_ARATH (GDSL esterase/lipase At3g14820 OS=Arabidopsis thaliana GN=At3g14820 PE=3 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.958e-23
Identity = 58/169 (34.32%), Postives = 95/169 (56.21%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYII 668
            A  VFGDS++D+GNNN + T  +++ PPYG DFP   PTGRFS+G    DII++ +G ++   PYL   L    LL G  FAS G G  +      ++++ M  QL YF EY  ++    G ++ + ++ +++ L+    ND    Y++     RS ++   +Y +Y++
Sbjct:   32 ALIVFGDSIMDTGNNNDIPTLLKSNFPPYGRDFPGAIPTGRFSDGKVPSDIIAESLGIAKTLPPYLGSNLKPHDLLKGVIFASGGSG-YDPLTSTLLSVVSMSDQLKYFQEYLAKIKQHFGEEKVKFILEKSVFLVVSSSNDLAETYWV-----RSVEYDRNSYAEYLV 194          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL68_ARATH (GDSL esterase/lipase At4g30140 OS=Arabidopsis thaliana GN=At4g30140 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.751e-23
Identity = 69/192 (35.94%), Postives = 103/192 (53.65%), Query Frame = 3
Query:  105 MIIGIAFALGSI---VRLAEARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIIS 671
            +I+   FA+ ++   V   +   +FVFGDS+ D+GNNN L T A+ +  PYGID+    PTGRFSNG NIPD+I++  G +  P+P  +     Q   IG N+AS   GI  +T       I + +Q++         SA+I A      + + L  I +G ND++NNY+L P +   R F    Y + +IS
Sbjct:   11 IILATVFAVAAVAPAVHGQQTPCYFVFGDSVFDNGNNNALNTKAKVNYLPYGIDY-FQGPTGRFSNGRNIPDVIAELAGFNN-PIPPFAGASQAQ-ANIGLNYASGAGGIREETSENMGERISLRQQVN------NHFSAIITAAVPLSRLRQCLYTINIGSNDYLNNYFLSPPTLARRLFNPDQYARSLIS 193          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: APG_BRANA (Anther-specific proline-rich protein APG (Fragment) OS=Brassica napus GN=APG PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.818e-23
Identity = 57/154 (37.01%), Postives = 86/154 (55.84%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYL------SPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYY 605
            A F FGDS+ D+GNNN L T  + +  PYG+DFP    TGRFSNG    D IS+ +G  E    Y+      + EL    LL G +FAS G G L  T   +  +  M  QL YF +Y++R+  ++G ++ +++V++   ++  G ND +  Y+
Sbjct:  125 AVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVKEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTSESW-KVTTMLDQLTYFQDYKKRMKKLVGKKKTKKIVSKGAAIVVAGSNDLIYTYF 277          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL89_ARATH (GDSL esterase/lipase At5g63170 OS=Arabidopsis thaliana GN=At5g63170 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22
Identity = 62/180 (34.44%), Postives = 99/180 (55.00%), Query Frame = 3
Query:  135 SIVRLAEARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIG-AQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIIS 671
            SIV      A   FGDS++D+GNNNYL T  + +  PYG DF T R TGRF NG    D+I++ +G       Y SP L    +L G +FAS G G L+    +   +I +  QL+ F  Y  +++++ G  ++ R +++ A+ +I+ G ND    Y+  P   R+ ++T+ +Y   ++S
Sbjct:   19 SIVHAGNIPAVIAFGDSILDTGNNNYLMTLTKVNFYPYGRDFVTRRATGRFGNGRIPTDLIAEGLGIKNIVPAYRSPFLEPNDILTGVSFASGGSG-LDPMTARIQGVIWVPDQLNDFKAYIAKLNSITGDEEKTRSIISNAVFVISAGNNDIAITYFTNP--IRNTRYTIFSYTDLMVS 195          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL56_ARATH (GDSL esterase/lipase At3g43570 OS=Arabidopsis thaliana GN=At3g43570 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22
Identity = 58/191 (30.37%), Postives = 104/191 (54.45%), Query Frame = 3
Query:   99 WMMIIGIAFALGSIVRLAEAR--AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYI 665
            W+ ++ I     ++ +   A   A  VFGDS++D+GNNN L T  + + PPYG D+P    TGRFS+G    D+I+++IG ++    Y++P L  + LL G  FAS G G  +    + +++I ++ QL YF EY  ++    G ++A+ ++  +  L+    ND  + Y      A++ ++   +Y  ++
Sbjct:    7 WLTLVLIVVEANAVKQGKNATIPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKIGLAKTLPAYMNPYLKPEDLLKGVTFASGGTG-YDPLTAKIMSVISVWDQLIYFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYL-----AQAHRYDRTSYANFL 191          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: APG_ARATH (Anter-specific proline-rich protein APG OS=Arabidopsis thaliana GN=APG PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22
Identity = 57/158 (36.08%), Postives = 86/158 (54.43%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVI----------GAQQARQLVNRALVLITVGGNDFVNNYY 605
            A F FGDS+ D+GNNN L T  +++  PYG+DF     TGRFSNG    D +++ +G  E    YL P++    LL G +FAS G G  N T  +  N I M  QL YF +Y  +V+ ++          G ++  QL+++ + ++  G ND +  Y+
Sbjct:  204 AVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVKEIVPAYLDPKIQPNDLLTGVSFASGGAG-YNPTTSEAANAIPMLDQLTYFQDYIEKVNRLVRQEKSQYKLAGLEKTNQLISKGVAIVVGGSNDLIITYF 360          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL47_ARATH (GDSL esterase/lipase At2g40250 OS=Arabidopsis thaliana GN=At2g40250 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.351e-22
Identity = 57/148 (38.51%), Postives = 84/148 (56.76%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYY 605
            A + FGDS VDSGNNNY+ T  +++ PPYG  FP+   TGRFS+G    D I   +G       YL+P +    LL G +FASAG G L+D   +    I M +Q  YF E   ++ +++G  +  +++  A+ +I+ G ND + N Y
Sbjct:   36 ALYAFGDSTVDSGNNNYIPTLFQSNHPPYGKSFPSKLSTGRFSDGKLATDFIVSSLGLKPTLPAYLNPSVKPVDLLTGVSFASAG-GGLDDRTAKSSLTITMDKQWSYFEEALGKMKSLVGDSETNRVIKNAVFVISAGTNDMIFNVY 182          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL17_ARATH (GDSL esterase/lipase At1g33811 OS=Arabidopsis thaliana GN=At1g33811 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.465e-22
Identity = 63/191 (32.98%), Postives = 103/191 (53.93%), Query Frame = 3
Query:  102 MMIIGIAFALGSIVRLAEARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLD-YFAEYQRRVSAVIG-AQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYII 668
            +++ G    +    + A+    F+FGDSLVD+GNNN L + ARA+  PYGIDFP    TGRF+NG    D ++Q +G      PY    + GQ +L GANFAS   GI ++TG        M +Q++ Y    Q+ +    G   + ++ ++R +    +G ND++NNY++  + + S  +    + + +I
Sbjct:   14 LVLFGFKTTVSQPQQQAQVPCLFIFGDSLVDNGNNNRLLSLARANYRPYGIDFP-QGTTGRFTNGRTYVDALAQILGFRNYIPPY--SRIRGQAILRGANFASGAAGIRDETGDNLGAHTSMNQQVELYTTAVQQMLRYFRGDTNELQRYLSRCIFYSGMGSNDYLNNYFMPDFYSTSTNYNDKTFAESLI 201          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL55_ARATH (GDSL esterase/lipase At3g43550 OS=Arabidopsis thaliana GN=At3g43550 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.837e-21
Identity = 54/168 (32.14%), Postives = 93/168 (55.36%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYI 665
            A  VFGDS++D+GNNN L T  + + PPYG D+P    TGRFS+G    D+I++++G  +    Y++P L    LL G  FAS G G  +    + +++I ++ QL YF EY  ++    G ++A+ ++  +  L+    ND  + Y      A++ ++   +Y  ++
Sbjct:   30 ALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLVKTLPAYMNPYLKPHDLLKGVTFASGGTG-YDPLTAKIMSVISVWDQLIYFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYL-----AQAHRYDRTSYANFL 191          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL37_ARATH (GDSL esterase/lipase At2g19060 OS=Arabidopsis thaliana GN=At2g19060 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.838e-21
Identity = 64/194 (32.99%), Postives = 99/194 (51.03%), Query Frame = 3
Query:  105 MIIGIAFALGSIVRLAEA------RAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYII 668
            M   + +A  + V +AEA        +FVFGDS+ D+GNNN L T A+ +  PYGIDF    PTGRFSNG NIPD I++ +  S    P+     + ++   G N+AS G G+L +T       I   +Q+       R++    G    +  + + L  I +G ND++NNY++      +  F+   Y  ++I
Sbjct:    5 MFKALLWAFATAVVMAEAVRGQLVPCYFVFGDSVFDNGNNNELDTLAKVNYSPYGIDF-ARGPTGRFSNGRNIPDFIAEELRISYDIPPF--TRASTEQAHTGINYASGGAGLLEETSQHLGERISFEKQI----TNHRKMIMTAGVPPEK--LKKCLYTINIGSNDYLNNYFMPAPYTTNENFSFDEYADFLI 189          
The following BLAST results are available for this feature:
BLAST of FC920341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
GDL52_ARATH3.958e-2334.32GDSL esterase/lipase At3g14820 OS=Arabidopsis thal... [more]
GDL68_ARATH6.751e-2335.94GDSL esterase/lipase At4g30140 OS=Arabidopsis thal... [more]
APG_BRANA8.818e-2337.01Anther-specific proline-rich protein APG (Fragment... [more]
GDL89_ARATH1.964e-2234.44GDSL esterase/lipase At5g63170 OS=Arabidopsis thal... [more]
GDL56_ARATH2.566e-2230.37GDSL esterase/lipase At3g43570 OS=Arabidopsis thal... [more]
APG_ARATH2.566e-2236.08Anter-specific proline-rich protein APG OS=Arabido... [more]
GDL47_ARATH3.351e-2238.51GDSL esterase/lipase At2g40250 OS=Arabidopsis thal... [more]
GDL17_ARATH7.465e-2232.98GDSL esterase/lipase At1g33811 OS=Arabidopsis thal... [more]
GDL55_ARATH2.837e-2132.14GDSL esterase/lipase At3g43550 OS=Arabidopsis thal... [more]
GDL37_ARATH4.838e-2132.99GDSL esterase/lipase At2g19060 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32007A11EF RVDevelop1 Citrus clementina cDNA clone C32007A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920341 ID=FC920341; Name=FC920341; organism=Citrus clementina; type=EST; length=671bp
AATCCAAGAAGAGTATATATCCATATATCTAATTAGAGTTTCGAAACAAT
ATGTCAATGGCTATTGCGACTTCATCGGCATCAGTAGCAATGCGTTCTTG
GATGATGATTATTGGCATTGCATTTGCTTTAGGATCAATTGTTCGTCTTG
CTGAGGCTCGAGCTTTCTTCGTGTTTGGCGATTCACTCGTCGACAGCGGC
AACAACAACTACCTCGCCACGACTGCCCGTGCAGACGCGCCGCCTTATGG
GATTGATTTTCCTACTCACCGTCCCACAGGCCGTTTCTCCAATGGCTTCA
ACATCCCTGACATTATCAGTCAGAGAATTGGCCAATCGGAAGCCCCATTG
CCATACTTGAGTCCAGAACTCAATGGACAGAGACTGCTCATTGGTGCCAA
CTTCGCTTCAGCGGGAATTGGAATTCTCAATGACACCGGCATCCAATTTG
TAAACATAATTAGAATGTTCAGACAATTGGATTACTTCGCGGAGTACCAG
CGTCGAGTGAGTGCTGTCATTGGAGCCCAGCAAGCTCGCCAACTTGTAAA
CCGAGCACTAGTACTCATCACTGTCGGTGGCAATGATTTTGTGAATAACT
ATTACTTGGTTCCGTACTCTGCAAGATCTCGCCAATTCACTTTGCCCAAT
TATGTCAAGTATATCATCTCT
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