FC920342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920342 vs. ExPASy Swiss-Prot
Match: HPPA_STRAW (Pyrophosphate-energized proton pump OS=Streptomyces avermitilis GN=hppA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.471e-31 Identity = 84/247 (34.01%), Postives = 137/247 (55.47%), Query Frame = 3 Query: 3 GADLVGQVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHEFTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSWIGLPSSF------TIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFA------AMYGIAVAALGM 707 GADLVG+VE+ IPEDDPRN A IADNVGDNVGD AGM +DLF SYA + AAL++ ++FG + + +PL++ +IG+L +I +FA + +A + ++ + +S V +A+ ++ LP + T A+ + VA+G+ +I +T Y+T PV+D+ S TGAAT V+ G+++G +S + I + ++ +F A++ +A+A G+ Sbjct: 227 GADLVGKVEQGIPEDDPRNAATIADNVGDNVGDCAGMAADLFESYAVTLVAALILGK-AAFG----DSGLAFPLIVPAIGVLTAMI-GIFA--VAPRRADRSGMSAINRGFFVSAVFSLALVAVAVYVYLPGKYADLDGVTDVAIRAKDGDPRILAMVAVAIGIVLAALIQQLTGYFTETTRRPVRDIGKSSLTGAATVVLAGISVGLESAVYTALLIGLGVYGAFLLGGTSIMLALFAVALAGTGL 465
BLAST of FC920342 vs. ExPASy Swiss-Prot
Match: AVPX_ARATH (Pyrophosphate-energized membrane proton pump 3 OS=Arabidopsis thaliana GN=AVPL2 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.324e-30 Identity = 83/251 (33.07%), Postives = 133/251 (52.99%), Query Frame = 3 Query: 3 GADLVGQVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHEFTS--MLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSF--------------SFAAMYGIAVAALGM 707 GADLVG+VE IPEDDPRNPAVIAD VGDNVGD A G+DLF S A +A+++ + E S +L+PL++ S +++ I L +E + ++ +T+ +A++++ G + + +Y A N+ F+C VG+ + +++ YYT Y PV+ +A + TG TN+I G++LG +S +P+ I+V+I +F ++G AVA +GM Sbjct: 278 GADLVGKVEHGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQKCKIEDPSGFILFPLVVHSFDLVISSIGILSIKGTRNASVKSPVEDPM--VVLQKGYSLTIILAVLTF-GASTRWLLYTEQAPSAWLNF--FMCGLVGIITAYVFVWISRYYTDYKYEPVRTLALASSTGHGTNIIAGVSLGLESTALPVLVISVAIISAFWLGNTSGLIDEKGNPTGGLFGTAVATMGM 523
BLAST of FC920342 vs. ExPASy Swiss-Prot
Match: AVP2_ARATH (Pyrophosphate-energized membrane proton pump 2 OS=Arabidopsis thaliana GN=AVPL1 PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.403e-29 Identity = 82/251 (32.67%), Postives = 135/251 (53.78%), Query Frame = 3 Query: 3 GADLVGQVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHEFTS--MLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSF--------------SFAAMYGIAVAALGM 707 GADLVG+VE+ IPEDDPRNPAVIAD VGDNVGD A G+DLF S A +A+++ + E S +L+PL++ S +++ I L + +E + ++ +T+ +A++++ G + + +Y A N+ LC VG+ I ++++YYT + PV+ +A + TG TN+I G++LG +S +P+ I+V+I ++ ++G AVA +GM Sbjct: 278 GADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAKKCKIEDPSGFILFPLVVHSFDLIISSIGILSIKGTRDASVKSPVEDPM--AVLQKGYSLTIILAVITF-GASTRWLLYTEQAPSAWFNFA--LCGLVGIITAYIFVWISKYYTDYKHEPVRTLALASSTGHGTNIIAGVSLGLESTALPVLTISVAIISAYWLGNTSGLVDENGIPTGGLFGTAVATMGM 523
BLAST of FC920342 vs. ExPASy Swiss-Prot
Match: HPPA_PYRAE (Pyrophosphate-energized proton pump OS=Pyrobaculum aerophilum GN=hppA PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26 Identity = 81/238 (34.03%), Postives = 125/238 (52.52%), Query Frame = 3 Query: 3 GADLVGQVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHEFTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKV----VKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALG 704 GADLVG+VE IPEDDPRNP VIADNVGDNVGD+AGM +D++ SY + AA+ +A+I G+ +F + +L +++ L+ T ++ + VK L ++ +AI + IGL S ++ GA + K L ++G +I +T+YYTS Y PV+ +A+ + AT +I G +G S IP+ A+ V++ Y + V+ G Sbjct: 196 GADLVGKVEAGIPEDDPRNPGVIADNVGDNVGDVAGMAADVYESYIVTVTAAIFLAAI--LGLPTQFIEAI--ILFAAL----ALVATFAGVNLLKTTGVKH-------------PLSSISLAIYATIGL--SVVLFFIGAFTLGLDSTKALALAATTSLGAVIAPLIVKITDYYTSYNYGPVRKIAEQAKISPATVIITGYGVGLMSA-IPVIAVIVAVLGISYMIGYYTVPVSGFG 409
BLAST of FC920342 vs. ExPASy Swiss-Prot
Match: HPPA2_MYCDI (Pyrophosphate-energized proton pump 2 (Fragment) OS=Mycoplana dimorpha GN=hppA2 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 60/187 (32.09%), Postives = 91/187 (48.66%), Query Frame = 3 Query: 159 LVVASISSFGINHEFTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKV----VKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGM 707 +V+A+I G T+M YPL I + C+IT++ T ++ I +L K LI++ L +G+ G +SFTI V V+ LF+C +GL +I +TEYYT PV +A + TG TNVI GLA+ +S +P I I ++ A ++G A+A M Sbjct: 1 MVLAAIFFGGTPILATAMAYPLAICA----ACVITSIIGTFFVKLGTNNSIMGALYKGLIVTGALSILGL------GAATSFTIGWGSIGTVGGIEVRGGNLFVCGLIGLVVTALIVVITEYYTGTNKRPVNSIAQASVTGHGTNVIQGLAVSLESTALPAIVIVGGIIATYQLAGLFGTAIAVTAM 177
BLAST of FC920342 vs. ExPASy Swiss-Prot
Match: HPPA2_RHILT (Pyrophosphate-energized proton pump 2 (Fragment) OS=Rhizobium leguminosarum bv. trifolii GN=hppA2 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 50/170 (29.41%), Postives = 81/170 (47.65%), Query Frame = 3 Query: 204 TSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSW--IGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGM 707 ++M+YPL I C++T++ T ++ I +L K LI + V G+A+ ++ +G + T+ A + LF C VGL +I +TEYYT PV +A + TG TNVI GLA+ +S +P I I ++ ++G +A M Sbjct: 13 SAMVYPLAICG----ACILTSIAGTFFVKLGTNNSIMGALYKGLIATGVFSVAGLAVATYATVGWGTIGTV----AGMEITGTNLFFCGLVGLVVTALIVVITEYYTGTNKRPVNSIAQASVTGHGTNVIQGLAVSLESTALPAIVIVGGIIGTYQLGGLFGTGIAVTAM 174
BLAST of FC920342 vs. ExPASy Swiss-Prot
Match: HPPA_CHLTE (Pyrophosphate-energized proton pump OS=Chlorobium tepidum GN=hppA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 64/229 (27.95%), Postives = 109/229 (47.60%), Query Frame = 3 Query: 3 GADLVGQVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCA--ALVVASISSFGINHEFTSMLYPLLISSIGILVCLITTLFATD-IFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVAD-SCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAM 677 G+DL+ ++ I EDD RNP VIAD GDN GD G +D F +Y + A + ++ +I I S+L + + ++V + + D + ++K E + +K LI L ++ ++++I S I G + W+L + G AG +I + + +TS + V++V S GAA N++ GL G S AI V + +F F+ + Sbjct: 189 GSDLM-KIVFKIKEDDARNPGVIADCTGDNAGDSVGPTADGFETYGVTGVALISFILLAIKDPSIQ---VSLLVWIFAMRLVMIVASAVSYWVNDALAKMKYGNADEMNFEKPLITLVWLTSIVSIVLTYIA--SYMLIAQLGDGTMW--WKLASIITCGTIAGALIPELVDRFTSTECAFVRNVVQCSKEGGAALNILSGLVAGNFSAYWMGLAIIVLMGAAFGFSTL 409 The following BLAST results are available for this feature:
BLAST of FC920342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920342 ID=FC920342; Name=FC920342; organism=Citrus clementina; type=EST; length=709bpback to top |