FC920345

Overview
NameFC920345
Unique NameFC920345
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length604
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:141..744. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_NOCFA (Adenosylhomocysteinase OS=Nocardia farcinica GN=ahcY PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.191e-49
Identity = 102/205 (49.76%), Postives = 135/205 (65.85%), Query Frame = 1
Query:   16 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            +G ++KV DL+ A+FGR EI LAE EMPGLMA R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGA+VRW SCNIFSTQDH                       WKGETL+EYWW  E+ L W PG   ++I+DDGGDAT+L+  G +    +EK G +P   +  +AE+++ L ++R+  + D  K+  + E + GV+EE
Sbjct:   18 NGIDYKVADLTLAEFGRKEIRLAEHEMPGLMALRREYADVQPLKGARISGSLHMTVQTAVLIETLTALGAQVRWASCNIFSTQDHAAAAVVVGPHGTVEEPKGVSVFAWKGETLEEYWWAAEQMLTW-PGEPANMILDDGGDATMLVLRGAQ----FEKAGVVPPEDADHSAEYKVFLNLLRERFETDRGKWTAIAESVRGVTEE 217          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPT (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain TIE-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.653e-49
Identity = 104/199 (52.26%), Postives = 129/199 (64.82%), Query Frame = 1
Query:   10 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYH-TMKERLVGVSEE 603
            +A   ++ VKD+  A+FGR EI LAE EMPGLMA R E+GP QP KGAKI GSLHMTIQTAVLIETL ALGAEVRW SCNI+STQDH               KGETL++YW  T K  DW  GG P++I+DDGGDAT+ +H+G++AE      G        ++ E +I   +I+  LK  P  Y  T+ + + GVSEE
Sbjct:    2 TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGAKIAGSLHMTIQTAVLIETLVALGAEVRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLKDYWDYTAKLFDWSDGGTPNMILDDGGDATMFVHQGLRAE-----NGDTMFLDQHNSEEEEIFFALIKRILKEKPKGYFATLAKNIKGVSEE 195          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPA (Adenosylhomocysteinase OS=Rhodopseudomonas palustris GN=ahcY PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.653e-49
Identity = 104/199 (52.26%), Postives = 129/199 (64.82%), Query Frame = 1
Query:   10 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYH-TMKERLVGVSEE 603
            +A   ++ VKD+  A+FGR EI LAE EMPGLMA R E+GP QP KGAKI GSLHMTIQTAVLIETL ALGAEVRW SCNI+STQDH               KGETL++YW  T K  DW  GG P++I+DDGGDAT+ +H+G++AE      G        ++ E +I   +I+  LK  P  Y  T+ + + GVSEE
Sbjct:    2 TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGAKIAGSLHMTIQTAVLIETLVALGAEVRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLKDYWDYTAKLFDWSDGGTPNMILDDGGDATMFVHQGLRAE-----NGDTMFLDQHNSEEEEIFFALIKRILKEKPKGYFATLAKNIKGVSEE 195          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_DESVM (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=ahcY PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.525e-49
Identity = 99/192 (51.56%), Postives = 128/192 (66.67%), Query Frame = 1
Query:   31 KVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH-XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            KV D++ ADFG  E++L+E E+PGLM     +G S+P KG ++TGSLHMTIQTA+LI+TL  LGA++RW SCNIFSTQDH               WKGETL++YWWCTE AL W  G GPDL+VDDGGDATL+IH+GV+ E   E   +     + DN EFQI +  +    + DP ++  +  R+ GVSEE
Sbjct:   17 KVADMALADFGHKEMQLSEREVPGLMELIRMYGVSKPLKGLRVTGSLHMTIQTAMLIKTLYELGADIRWASCNIFSTQDHAAAAIADSGMAKVFAWKGETLEDYWWCTEMALTWPDGSGPDLLVDDGGDATLMIHKGVEVENNPELLKQ-----AYDNKEFQIIMDRLALAYQNDPGRWQRVAARVRGVSEE 203          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_CHLPD (Adenosylhomocysteinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=ahcY PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.525e-49
Identity = 100/192 (52.08%), Postives = 123/192 (64.06%), Query Frame = 1
Query:   28 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            +KV D+S A++GR EI++AE EMPGLMA R ++   +P KGA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH              WKGETL EYWWCT + L++  G GP LIVDDGGDATL+IH G K E       K P      N E +     +R+  + D  ++H +   + GVSEE
Sbjct:   10 YKVADMSLAEWGRKEIDIAEKEMPGLMATRKKYAGQKPLKGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAKAGIPVFAWKGETLDEYWWCTRQILEFEGGKGPHLIVDDGGDATLMIHLGYKIEIDPSLLDKTP-----GNIEEKALFQQLREVYEEDSQRWHNVAAEMKGVSEE 196          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_CHLP8 (Adenosylhomocysteinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=ahcY PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.910e-49
Identity = 100/193 (51.81%), Postives = 124/193 (64.25%), Query Frame = 1
Query:   25 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            ++KV D+S A++GR EIE+AE EMPGLMA R ++   +P  GA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH              WKGETL EYWWCT + L++  G GP+LIVDDGGDATL+IH G K E       K P      NAE +     +++    D  ++H +   + GVSEE
Sbjct:    9 DYKVADISLAEWGRKEIEIAEKEMPGLMATRKKYEGKKPLAGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAAAGVPVFAWKGETLDEYWWCTRQILEFEGGLGPNLIVDDGGDATLMIHLGYKIENDPSMLDKTP-----GNAEERALFAQLKEVFAEDNQRWHKVAAGMKGVSEE 196          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_PELPB (Adenosylhomocysteinase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.719e-49
Identity = 102/193 (52.85%), Postives = 123/193 (63.73%), Query Frame = 1
Query:   25 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            ++KV DLS A++GR EI++AE EMPGLMA R ++    P KGA+I GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQDH              WKGETL+EYWWCT + L++  G GP+LIVDDGGDATL+I  G K E   E   K P      N E +      R+    D  ++H +   + GVSEE
Sbjct:    9 DYKVADLSLAEWGRKEIDVAEKEMPGLMATRRKYAGQYPLKGARIAGSLHMTIQTAVLIETLVELGAEVRWASCNIFSTQDHAAAAIAKSGVPVFAWKGETLEEYWWCTRQILEFEGGKGPNLIVDDGGDATLMIILGYKIENNPELLEKAP-----ANLEEKALYQQFREVFAEDSQRWHKVAAEMKGVSEE 196          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_CHLTE (Adenosylhomocysteinase OS=Chlorobium tepidum GN=ahcY PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.719e-49
Identity = 101/193 (52.33%), Postives = 124/193 (64.25%), Query Frame = 1
Query:   25 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            ++KV D+S A++GR EIE+AE EMPGLMA R ++   +P  GA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH              WKGETL EYWWCT + L++  G GP+LIVDDGGDATL+IH G K E       K P      NAE +  L  ++     D  ++H +   + GVSEE
Sbjct:    9 DYKVADISLAEWGRKEIEIAEKEMPGLMATRKKYEGKKPLAGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAAAGVPVFAWKGETLDEYWWCTRQILEFEGGLGPNLIVDDGGDATLMIHFGYKIENDPSMLDKTP-----GNAEEKALLQQLKAVFAEDNQRWHKVAAGMKGVSEE 196          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_PELCD (Adenosylhomocysteinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.008e-48
Identity = 104/192 (54.17%), Postives = 127/192 (66.15%), Query Frame = 1
Query:   28 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            + VKD+  A++GR EI +AE EMPGLMA R E+  ++P  GA+ITGSLHMTIQTAVLIETL  LGA++RW SCNI+STQDH              +KGETL+EYW  T KAL +    GP LIVDDGGDATLLIH GV+ E  Y +TGK+P+  S DN E  I   ++   L  D   +  M   L+GVSEE
Sbjct:   10 YVVKDMGLAEWGRREIRMAEAEMPGLMAIREEYRGTKPLAGARITGSLHMTIQTAVLIETLAELGADLRWASCNIYSTQDHAAAAIAATGVPVFAYKGETLEEYWEYTFKALAYEE--GPQLIVDDGGDATLLIHRGVERERAYARTGKVPE-ISHDNKELSIVDALLNRQLLVDAEYWQRMATGLLGVSEE 198          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_PELLD (Adenosylhomocysteinase OS=Pelodictyon luteolum (strain DSM 273) GN=ahcY PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.933e-48
Identity = 101/201 (50.25%), Postives = 128/201 (63.68%), Query Frame = 1
Query:   13 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKA----DPMKYHTMKERLVGVSEE 603
            A+   +KV D+S A++GR EI++AE EMPGLMA R ++   +P KGA++ GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH              WKGETL++YWWCT + LD+G G GP+LIVDDGGDATL+I  G K E          +P+   NA        +   LKA    D  ++H + + + GVSEE
Sbjct:    5 ATALAYKVADISLAEWGRKEIDIAEKEMPGLMAIRKKYAGQKPLKGARVAGSLHMTIQTAVLIETLVDLGADVRWASCNIFSTQDHAAAAIAATGVPVFAWKGETLEDYWWCTRQILDFGDGQGPNLIVDDGGDATLMIILGYKIEN---------NPSMLQNAGGNAEERALFGQLKAIYEEDSNRWHKVAKEMKGVSEE 196          
The following BLAST results are available for this feature:
BLAST of FC920345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_NOCFA1.191e-4949.76Adenosylhomocysteinase OS=Nocardia farcinica GN=ah... [more]
SAHH_RHOPT2.653e-4952.26Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_RHOPA2.653e-4952.26Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_DESVM4.525e-4951.56Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_CHLPD4.525e-4952.08Adenosylhomocysteinase OS=Chlorobium phaeobacteroi... [more]
SAHH_CHLP85.910e-4951.81Adenosylhomocysteinase OS=Chlorobaculum parvum (st... [more]
SAHH_PELPB7.719e-4952.85Adenosylhomocysteinase OS=Pelodictyon phaeoclathra... [more]
SAHH_CHLTE7.719e-4952.33Adenosylhomocysteinase OS=Chlorobium tepidum GN=ah... [more]
SAHH_PELCD1.008e-4854.17Adenosylhomocysteinase OS=Pelobacter carbinolicus ... [more]
SAHH_PELLD2.933e-4850.25Adenosylhomocysteinase OS=Pelodictyon luteolum (st... [more]

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Properties
Property NameValue
Genbank descriptionC32007B04EF RVDevelop1 Citrus clementina cDNA clone C32007B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920345 ID=FC920345; Name=FC920345; organism=Citrus clementina; type=EST; length=604bp
GTCCAGAAATCCGCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCA
GGCTGACTTCGGCCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGG
GGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGA
GCCAAGATCACCGGTTCACTCCACATGACCATCCAGACCGCCGTCCTCAT
CGAGACCCTCACCGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACA
TCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCC
TCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCAC
GGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCG
ATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAG
GAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAA
CGCCGAGTTTCAGATTGCTTTGACTATCATTAGAGATGGGTTGAAGGCCG
ATCCCATGAAGTACCACACAATGAAGGAAAGATTAGTTGGTGTTTCCGAA
GAAA
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