FC920358

Overview
NameFC920358
Unique NameFC920358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length765
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_SERP5 (Chaperone protein htpG OS=Serratia proteamaculans (strain 568) GN=htpG PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.181e-42
Identity = 94/188 (50.00%), Postives = 131/188 (69.68%), Query Frame = 1 
Query:  112 AMADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTKHND---DEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            +M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L+     +G  EL +R+  DK  +TLTI D+GIGM + +++ NLGTIA+SGTK F+E++      D  +IGQFGVGFYSA++VA++V V T+      D+   WES   G +T+  DVS E   RGT++TL+L+E +
Sbjct:    2 SMKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSAPELYEGDGELRVRLSFDKDQRTLTIADNGIGMNREEVIENLGTIAKSGTKAFLESIGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGAAADQGVFWESIGEGDYTIA-DVSKE--DRGTEITLHLREGE 186
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_RALSO (Chaperone protein htpG OS=Ralstonia solanacearum GN=htpG PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.181e-42
Identity = 97/186 (52.15%), Postives = 126/186 (67.74%), Query Frame = 1 
Query:  118 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHND---DEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            A  E  AFQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA+DK+RFE + D S L+G  EL IRI  D   +T+TI D+GIGM++ + + NLGTIARSGT+EF   L      D ++IGQFGVGFYSA++VA+RV V ++       E   WES   G FTV      E   RGT +TL+L+E +
Sbjct:    3 APHEKMAFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAVDKLRFEGIADPSLLEGGGELGIRIGFDAQARTVTIADNGIGMSRDEAIRNLGTIARSGTREFFSQLSGDQQKDAALIGQFGVGFYSAFIVADRVTVESRRAGVPAAEGVRWESAGDGEFTVDAIERAE---RGTTITLHLREGE 185
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_RALME (Chaperone protein htpG OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=htpG PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.181e-42
Identity = 93/186 (50.00%), Postives = 128/186 (68.82%), Query Frame = 1 
Query:  118 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHND---DEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            A  ET +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE++ + + L+   +L IRI  D A +TL I D+GIGM++ + + NLGTIARSGTKEF + L      D ++IGQFGVGFYSA++VA++V V T+      DE   WES   G F++      E   RG+ +TL+L+E +
Sbjct:    3 APHETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDATDKLRFEAIANPALLENDADLAIRIEADPAARTLKITDNGIGMSRDEAIRNLGTIARSGTKEFFQQLSGDQQKDAALIGQFGVGFYSAFIVADKVTVETRRAGLAADEAVRWESAGDGEFSIDAINRAE---RGSTITLHLREGE 185
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_ECOUT (Chaperone protein htpG OS=Escherichia coli (strain UTI89 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.181e-42
Identity = 92/187 (49.20%), Postives = 132/187 (70.59%), Query Frame = 1 
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E +
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGE 184
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLI (Chaperone protein htpG OS=Escherichia coli (strain K12) GN=htpG PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.181e-42
Identity = 92/187 (49.20%), Postives = 132/187 (70.59%), Query Frame = 1 
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E +
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGE 184
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLC (Chaperone protein htpG OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=htpG PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.181e-42
Identity = 92/187 (49.20%), Postives = 132/187 (70.59%), Query Frame = 1 
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E +
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGE 184
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL6 (Chaperone protein htpG OS=Escherichia coli O6 GN=htpG PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.181e-42
Identity = 92/187 (49.20%), Postives = 132/187 (70.59%), Query Frame = 1 
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E +
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGE 184
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL5 (Chaperone protein htpG OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.181e-42
Identity = 92/187 (49.20%), Postives = 132/187 (70.59%), Query Frame = 1 
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E +
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGE 184
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_ECOK1 (Chaperone protein htpG OS=Escherichia coli O1:K1 / APEC GN=htpG PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.181e-42
Identity = 92/187 (49.20%), Postives = 132/187 (70.59%), Query Frame = 1 
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E +
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGE 184
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_ECOHS (Chaperone protein htpG OS=Escherichia coli O9:H4 (strain HS) GN=htpG PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.181e-42
Identity = 92/187 (49.20%), Postives = 132/187 (70.59%), Query Frame = 1 
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E +
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGE 184
The following BLAST results are available for this feature:
BLAST of FC920358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_SERP52.181e-4250.00Chaperone protein htpG OS=Serratia proteamaculans ... [more]
HTPG_RALSO2.181e-4252.15Chaperone protein htpG OS=Ralstonia solanacearum G... [more]
HTPG_RALME2.181e-4250.00Chaperone protein htpG OS=Ralstonia metallidurans ... [more]
HTPG_ECOUT2.181e-4249.20Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOLI2.181e-4249.20Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOLC2.181e-4249.20Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOL62.181e-4249.20Chaperone protein htpG OS=Escherichia coli O6 GN=h... [more]
HTPG_ECOL52.181e-4249.20Chaperone protein htpG OS=Escherichia coli O6:K15:... [more]
HTPG_ECOK12.181e-4249.20Chaperone protein htpG OS=Escherichia coli O1:K1 /... [more]
HTPG_ECOHS2.181e-4249.20Chaperone protein htpG OS=Escherichia coli O9:H4 (... [more]

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Properties
Property NameValue
Genbank descriptionC32007C07EF RVDevelop1 Citrus clementina cDNA clone C32007C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920358 ID=FC920358; Name=FC920358; organism=Citrus clementina; type=EST; length=765bp
TTCGCTTTATAAAAATCTCTCTGCGCAAGCAAAAGCAAAAGCAAAAGCAA
TTCTCTTCGGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTATTCTGTGT
TGTGAGGAAGAGCAATGGCGGACACTGAGACATTCGCATTCCAGGCAGAG
ATCAACCAGCTGTTGAGTTTGATCATCAATACTTTCTACAGCAACAAGGA
GATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGATGCTTTGGACAAGA
TTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCGATGGACAACCAGAG
CTTTTCATCAGAATCATCCCTGACAAGGCTAACAAGACGCTCACTATTGT
TGATAGCGGTATCGGCATGACCAAAGCAGATTTGGTAAATAATTTGGGTA
CAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGGCTTTGCAGGCCGGG
GCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGTTTCTATTCGGCTTA
CCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCACAATGACGATGAGC
AATACATCTGGGAATCACAAGCTGGTGGTTCTTTCACTGTTACCAGGGAT
GTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATGACTCTGTACCTCAA
GGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAATTAGGACCTTGTGAA
GAGCACTCTGAATCATCAGCTCCCCTATTACTCTGGACTGAGAGACACTG
AGAAGAATTAGCGAT
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