FC920358

Overview
NameFC920358
Unique NameFC920358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length765
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HS90B_HUMAN (Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4)

HSP 1 Score: 283.878 bits (725), Expect = 6.718e-76
Identity = 145/180 (80.56%), Postives = 160/180 (88.89%), Query Frame = 1
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL I IIP+   +TLT+VD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+VVV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQ 189          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 283.878 bits (725), Expect = 6.718e-76
Identity = 145/180 (80.56%), Postives = 160/180 (88.89%), Query Frame = 1
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL I IIP+   +TLT+VD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+VVV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQ 189          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HS90A_CHICK (Heat shock protein HSP 90-alpha OS=Gallus gallus GN=HSP90AA1 PE=3 SV=3)

HSP 1 Score: 283.878 bits (725), Expect = 6.718e-76
Identity = 146/180 (81.11%), Postives = 161/180 (89.44%), Query Frame = 1
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD   +L I +IP+K ++TLTIVD+GIGMTKADLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVG YSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEPLGRGTK+ L+LKEDQ
Sbjct:   15 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKDLKINLIPNKHDRTLTIVDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGSYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRLD-NGEPLGRGTKVILHLKEDQ 193          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP83_DROVI (Heat shock protein 83 (Fragment) OS=Drosophila virilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.146e-75
Identity = 141/180 (78.33%), Postives = 163/180 (90.56%), Query Frame = 1
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL+I++IP+K   TLTI+D+GIGMTK+DLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVA++V VT+K+NDDEQY+WES AGGSFTV  D + EPLGRGTK+ L++KEDQ
Sbjct:    4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRAD-NSEPLGRGTKIVLFIKEDQ 182          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 283.108 bits (723), Expect = 1.146e-75
Identity = 144/180 (80.00%), Postives = 160/180 (88.89%), Query Frame = 1
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL I I+P+   +TLT+VD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+VVV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDILPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQ 189          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 283.108 bits (723), Expect = 1.146e-75
Identity = 144/180 (80.00%), Postives = 160/180 (88.89%), Query Frame = 1
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD   +L I +IPD+  +TLTI+D+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQYIWES AGGSFTV  D  GE +GRGTK+ L+LKEDQ
Sbjct:   13 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSCKDLKIELIPDQKERTLTIIDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYIWESAAGGSFTVKPDF-GESIGRGTKVILHLKEDQ 191          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.553e-75
Identity = 144/180 (80.00%), Postives = 160/180 (88.89%), Query Frame = 1
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   +L I I+P+  + TLT++D+GIGMTKADLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+VVV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LYLKEDQ
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDTGKDLKIDIVPNPRDPTLTLLDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRTD-HGEPIGRGTKVILYLKEDQ 189          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HS902_HUMAN (Putative heat shock protein HSP 90-alpha A2 OS=Homo sapiens GN=HSP90AA2 PE=1 SV=2)

HSP 1 Score: 279.256 bits (713), Expect = 1.655e-74
Identity = 143/180 (79.44%), Postives = 159/180 (88.33%), Query Frame = 1
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKI +ESLTD SKLD   EL I +IP+K ++TLTIVD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGV FYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GE +GRGTK+ L+LKEDQ
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIWYESLTDPSKLDSGKELHINLIPNKQDQTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVSFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGERMGRGTKVILHLKEDQ 194          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 278.485 bits (711), Expect = 2.823e-74
Identity = 141/184 (76.63%), Postives = 160/184 (86.96%), Query Frame = 1
Query:  109 RAMADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            R   + ETFAFQAEI QL+SLIINTFYSNKEIFLREL+SN+SDALDKIR+ESLTD +KLD   +L I IIP+   +TLT++D+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ
Sbjct:    6 RQEEEAETFAFQAEIAQLMSLIINTFYSNKEIFLRELVSNASDALDKIRYESLTDPTKLDSGKDLKIDIIPNVQERTLTLIDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVKVD-HGEPIGRGTKVILHLKEDQ 188          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP90_ASPFU (Heat shock protein 90 OS=Aspergillus fumigatus GN=hsp90 PE=1 SV=3)

HSP 1 Score: 278.1 bits (710), Expect = 3.686e-74
Identity = 139/179 (77.65%), Postives = 161/179 (89.94%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            +ETF FQAEI+QLLSLIINT YSNKEIFLRELISN+SDALDKIR++SL+D +KLD   +L I IIPDK NKTLTI D+GIGMTKADL+NNLGTIARSGTK+FMEAL AGAD+SMIGQFGVGFYSAYLVA+RV V +K+NDDEQYIWES AGG+FT+T+D  GE LGRGTK+ L+LK++Q
Sbjct:    3 SETFEFQAEISQLLSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPTKLDTGKDLRIDIIPDKENKTLTIRDTGIGMTKADLINNLGTIARSGTKQFMEALSAGADISMIGQFGVGFYSAYLVADRVTVVSKNNDDEQYIWESAAGGTFTLTQDTEGEQLGRGTKIILHLKDEQ 181          
The following BLAST results are available for this feature:
BLAST of FC920358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HS90B_HUMAN6.718e-7680.56Heat shock protein HSP 90-beta OS=Homo sapiens GN=... [more]
HS90B_HORSE6.718e-7680.56Heat shock protein HSP 90-beta OS=Equus caballus G... [more]
HS90A_CHICK6.718e-7681.11Heat shock protein HSP 90-alpha OS=Gallus gallus G... [more]
HSP83_DROVI1.146e-7578.33Heat shock protein 83 (Fragment) OS=Drosophila vir... [more]
HS90B_MOUSE1.146e-7580.00Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]
H90A1_DANRE1.146e-7580.00Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]
HS90B_CHICK2.553e-7580.00Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]
HS902_HUMAN1.655e-7479.44Putative heat shock protein HSP 90-alpha A2 OS=Hom... [more]
HS90B_DANRE2.823e-7476.63Heat shock protein HSP 90-beta OS=Danio rerio GN=h... [more]
HSP90_ASPFU3.686e-7477.65Heat shock protein 90 OS=Aspergillus fumigatus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32007C07EF RVDevelop1 Citrus clementina cDNA clone C32007C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920358 ID=FC920358; Name=FC920358; organism=Citrus clementina; type=EST; length=765bp
TTCGCTTTATAAAAATCTCTCTGCGCAAGCAAAAGCAAAAGCAAAAGCAA
TTCTCTTCGGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTATTCTGTGT
TGTGAGGAAGAGCAATGGCGGACACTGAGACATTCGCATTCCAGGCAGAG
ATCAACCAGCTGTTGAGTTTGATCATCAATACTTTCTACAGCAACAAGGA
GATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGATGCTTTGGACAAGA
TTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCGATGGACAACCAGAG
CTTTTCATCAGAATCATCCCTGACAAGGCTAACAAGACGCTCACTATTGT
TGATAGCGGTATCGGCATGACCAAAGCAGATTTGGTAAATAATTTGGGTA
CAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGGCTTTGCAGGCCGGG
GCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGTTTCTATTCGGCTTA
CCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCACAATGACGATGAGC
AATACATCTGGGAATCACAAGCTGGTGGTTCTTTCACTGTTACCAGGGAT
GTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATGACTCTGTACCTCAA
GGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAATTAGGACCTTGTGAA
GAGCACTCTGAATCATCAGCTCCCCTATTACTCTGGACTGAGAGACACTG
AGAAGAATTAGCGAT
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