FC920358

Overview
NameFC920358
Unique NameFC920358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length765
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_BACA2 (Chaperone protein htpG OS=Bacillus amyloliquefaciens (strain FZB42) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.029e-37
Identity = 81/174 (46.55%), Postives = 120/174 (68.97%), Query Frame = 1
Query:  139 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKH-NDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            F+AE  +LL ++IN+ Y+ KEIFLRELISN+SDA+DKI +++LTD S    Q   +I++  DK  +TLT+ D+GIGMTK +L  +LGTIA+SG+  F +   +     +IGQFGVGFY+A++VA++V V +K    DE Y+WES+    +T+      E +  GT++TL +KE+
Sbjct:    6 FKAESKRLLDMMINSIYTQKEIFLRELISNASDAIDKIYYKALTDDSLTFDQDNYYIKVTADKEARTLTVTDTGIGMTKDELEQHLGTIAKSGSLAFKQENDSKDGHDIIGQFGVGFYAAFMVADKVTVKSKALGSDEAYVWESEGAAGYTIA-PCDKETI--GTEITLKIKEN 176          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_RICFE (Chaperone protein htpG OS=Rickettsia felis GN=htpG PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.049e-36
Identity = 80/177 (45.20%), Postives = 122/177 (68.93%), Query Frame = 1
Query:  139 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGA--DVSMIGQFGVGFYSAYLVAERVVVTT-KHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            F AE+ ++L+L+I++ YSNKEIF+RELISN+SDA DK+R+ S ++     G     I +  DK    + I D+GIGM K DL+ NLGTIARSGT  F+++L   +  D  +IGQFGVGFYS+++VA++V VT+ K  +D+ ++WES   G + V+   S +   RGT++ L++K+++
Sbjct:    8 FDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNSELTSGDSNFKITVKVDKDKGQIIIRDNGIGMNKDDLIENLGTIARSGTANFLKSLSGDSKKDNMLIGQFGVGFYSSFMVADKVTVTSRKAGEDKVHVWESDGLGEYIVSE--SDKEFTRGTEIVLHIKKEE 182          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBJ (Chaperone protein htpG OS=Clostridium botulinum (strain Kyoto / Type A2) GN=htpG PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.049e-36
Identity = 83/178 (46.63%), Postives = 120/178 (67.42%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTK-HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            ET  F+AE  +LL L+IN+ Y++KEIFLRELISNSSDA+DKI +++LTD S    + + +IR++ DK N+ L I D+GIGMTK +L NNLG IA+SG+ +F +  +      +IGQFGVGFYSA+LV++ V V +K    +E Y W S+    +T+      E    GT++ L +K++
Sbjct:    2 ETKQFKAESKRLLDLMINSIYTHKEIFLRELISNSSDAIDKIYYKTLTDDSLKFERDDYYIRVVSDKENRILKIADTGIGMTKEELENNLGVIAKSGSLQFKKENEVKEGYDIIGQFGVGFYSAFLVSDDVTVISKAFGSNEAYKWNSKGAEGYTIE---PCEKEAYGTEIILKIKDN 176          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_CLOB6 (Chaperone protein htpG OS=Clostridium botulinum (strain 657 / Type Ba4) GN=htpG PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.049e-36
Identity = 83/178 (46.63%), Postives = 120/178 (67.42%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTK-HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            ET  F+AE  +LL L+IN+ Y++KEIFLRELISNSSDA+DKI +++LTD S    + + +IR++ DK N+ L I D+GIGMTK +L NNLG IA+SG+ +F +  +      +IGQFGVGFYSA+LV++ V V +K    +E Y W S+    +T+      E    GT++ L +K++
Sbjct:    2 ETKQFKAESKRLLDLMINSIYTHKEIFLRELISNSSDAIDKIYYKTLTDDSLKFERDDYYIRVVSDKENRILKIADTGIGMTKEELENNLGVIAKSGSLQFKKENEVKEGYDIIGQFGVGFYSAFLVSDDVTVISKAFGSNEAYKWNSKGAEGYTIE---PCEKEAYGTEIILKIKDN 176          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_VIBSL (Chaperone protein htpG OS=Vibrio splendidus (strain LGP32) GN=htpG PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.369e-36
Identity = 84/187 (44.92%), Postives = 125/187 (66.84%), Query Frame = 1
Query:  112 AMADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTKH---NDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            A  + ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF++L++     G  +L +++  +    TLTI D+GIGM++ +++ +LGTIA+SGT +F   L      D  +IGQFGVGFYSA++VA+ V V T+     +D+   W S   G +T+  D++ E   RGT + L+++ED
Sbjct:    5 ATQNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFQALSNGDLYQGDADLGVKLSFNAEANTLTISDNGIGMSRDNVIEHLGTIAKSGTADFFSKLSEDQSKDSQLIGQFGVGFYSAFIVADAVTVRTRAAGLANDQAVQWHSAGEGDYTI-EDITKE--SRGTDIILHMRED 188          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_PSYIN (Chaperone protein htpG OS=Psychromonas ingrahamii (strain 37) GN=htpG PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.369e-36
Identity = 82/187 (43.85%), Postives = 126/187 (67.38%), Query Frame = 1
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHNDD---EQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            M   +   F A+  +LL L+I++ YSNKEIFLREL+SN++DA DK+RF++L+D S  +   +L +R+  D   KT+TI D+GIGM++ +++ +LGTIA+SGT +F E L      D  +IGQFGVGFYS+++VA++V V T+   +   +   W S     +TV  D+  E  GRGT++TL+L++D+
Sbjct:    1 MEHQQNHTFSADTGKLLKLMIHSLYSNKEIFLRELVSNAADAADKLRFKALSDGSLFENDGDLRVRLSFDADLKTITISDNGIGMSRDEVIEHLGTIAKSGTSDFFEQLSGDQVKDSQLIGQFGVGFYSSFIVADKVTVNTRKAGEPASQGTCWISTGESDYTVA-DI--EKAGRGTEITLHLRDDE 184          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_ANAMM (Chaperone protein htpG OS=Anaplasma marginale (strain St. Maries) GN=htpG PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.369e-36
Identity = 82/185 (44.32%), Postives = 127/185 (68.65%), Query Frame = 1
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVV-TTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            M D E   F AE+ ++LSL++++ Y+NK+IFLRE+ISN+SDA DK+R+   +D+S ++   EL I I  D+  + LT+ D+GIGM++ +L++NLGTIA SGT+ F+E  + G      +IG+FGVGFYS ++VA  VVV + K  +   + W+S   G F+V+  + G+ + RGTK+ L L+ED+
Sbjct:    1 MGDVEELKFSAEVGKVLSLVVHSLYTNKDIFLREVISNASDACDKLRYLFCSDQSLMEAGEELRIVISVDRDRRELTVRDNGIGMSRKELIDNLGTIASSGTQRFLEEFKGGKAQGCDLIGKFGVGFYSVFMVATDVVVESCKAGEKVGHRWQSSGDGVFSVS-TIEGD-VSRGTKVILTLREDE 183          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBL (Chaperone protein htpG OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.789e-36
Identity = 82/178 (46.07%), Postives = 120/178 (67.42%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTK-HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            ET  F+AE  +LL L+IN+ Y++KEIFLRELISNSSDA+DKI +++LTD S    + + +I+++ DK N+ L I D+GIGMTK +L NNLG IA+SG+ +F +  +      +IGQFGVGFYSA+LV++ V V +K    +E Y W S+    +T+      E    GT++ L +K++
Sbjct:    2 ETKQFKAESKRLLDLMINSIYTHKEIFLRELISNSSDAIDKIYYKTLTDDSLKFERDDYYIKVVSDKENRVLKIADTGIGMTKEELENNLGVIAKSGSLQFKKENEVKEGYDIIGQFGVGFYSAFLVSDDVTVISKAFGSNEAYKWNSKGAEGYTIE---PCEKEAYGTEIILKIKDN 176          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBK (Chaperone protein htpG OS=Clostridium botulinum (strain Okra / Type B1) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.789e-36
Identity = 82/178 (46.07%), Postives = 120/178 (67.42%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTK-HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            ET  F+AE  +LL L+IN+ Y++KEIFLRELISNSSDA+DKI +++LTD S    + + +I+++ DK N+ L I D+GIGMTK +L NNLG IA+SG+ +F +  +      +IGQFGVGFYSA+LV++ V V +K    +E Y W S+    +T+      E    GT++ L +K++
Sbjct:    2 ETKQFKAESKRLLDLMINSIYTHKEIFLRELISNSSDAIDKIYYKTLTDDSLKFERDDYYIKVVSDKENRVLKIADTGIGMTKEELENNLGVIAKSGSLQFKKENEVKEGYDIIGQFGVGFYSAFLVSDDVTVISKAFGSNEAYKWNSKGAEGYTIE---PCEKEAYGTEIILKIKDN 176          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBH (Chaperone protein htpG OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.789e-36
Identity = 84/181 (46.41%), Postives = 121/181 (66.85%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTK-HNDDEQYIWESQAGGSFTVTRDVSGEPLGR---GTKMTLYLKED 657
            ET  F+AE  +LL L+IN+ Y++KEIFLRELISNSSDA+DKI +++LTD S    +   +IR++ DK N+ L I D+GIGMTK +L NNLG IA+SG+ +F +  +      +IGQFGVGFYSA+LV++ V V +K    +E Y W S+    +T+      EP  +   GT++ L +K++
Sbjct:    2 ETKQFKAESKRLLDLMINSIYTHKEIFLRELISNSSDAIDKIYYKTLTDDSLKFERDNYYIRVVSDKENRILKIADTGIGMTKEELENNLGVIAKSGSLQFKKENEVKEGYDIIGQFGVGFYSAFLVSDDVTVISKAFGSNEAYKWNSKGAEGYTI------EPCEKETYGTEIILKIKDN 176          
The following BLAST results are available for this feature:
BLAST of FC920358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_BACA28.029e-3746.55Chaperone protein htpG OS=Bacillus amyloliquefacie... [more]
HTPG_RICFE1.049e-3645.20Chaperone protein htpG OS=Rickettsia felis GN=htpG... [more]
HTPG_CLOBJ1.049e-3646.63Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_CLOB61.049e-3646.63Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_VIBSL1.369e-3644.92Chaperone protein htpG OS=Vibrio splendidus (strai... [more]
HTPG_PSYIN1.369e-3643.85Chaperone protein htpG OS=Psychromonas ingrahamii ... [more]
HTPG_ANAMM1.369e-3644.32Chaperone protein htpG OS=Anaplasma marginale (str... [more]
HTPG_CLOBL1.789e-3646.07Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_CLOBK1.789e-3646.07Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_CLOBH1.789e-3646.41Chaperone protein htpG OS=Clostridium botulinum (s... [more]

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Properties
Property NameValue
Genbank descriptionC32007C07EF RVDevelop1 Citrus clementina cDNA clone C32007C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920358 ID=FC920358; Name=FC920358; organism=Citrus clementina; type=EST; length=765bp
TTCGCTTTATAAAAATCTCTCTGCGCAAGCAAAAGCAAAAGCAAAAGCAA
TTCTCTTCGGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTATTCTGTGT
TGTGAGGAAGAGCAATGGCGGACACTGAGACATTCGCATTCCAGGCAGAG
ATCAACCAGCTGTTGAGTTTGATCATCAATACTTTCTACAGCAACAAGGA
GATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGATGCTTTGGACAAGA
TTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCGATGGACAACCAGAG
CTTTTCATCAGAATCATCCCTGACAAGGCTAACAAGACGCTCACTATTGT
TGATAGCGGTATCGGCATGACCAAAGCAGATTTGGTAAATAATTTGGGTA
CAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGGCTTTGCAGGCCGGG
GCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGTTTCTATTCGGCTTA
CCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCACAATGACGATGAGC
AATACATCTGGGAATCACAAGCTGGTGGTTCTTTCACTGTTACCAGGGAT
GTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATGACTCTGTACCTCAA
GGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAATTAGGACCTTGTGAA
GAGCACTCTGAATCATCAGCTCCCCTATTACTCTGGACTGAGAGACACTG
AGAAGAATTAGCGAT
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