FC920358

Overview
NameFC920358
Unique NameFC920358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length765
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP83_DROPE (Heat shock protein 83 (Fragment) OS=Drosophila persimilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.121e-73
Identity = 138/180 (76.67%), Postives = 159/180 (88.33%), Query Frame = 1
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL+I++IP+K   TLTI+D+GIGMTK+DLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYL+A+RV VT+K+NDDEQY+WES   GSFT   D + EPL RGTK+ LY+KEDQ
Sbjct:    4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIADRVTVTSKNNDDEQYVWESXXXGSFTXKAD-NXEPLXRGTKIXLYIKEDQ 182          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP90_PODAN (Heat shock protein 90 homolog OS=Podospora anserina GN=MOD-E PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.712e-71
Identity = 137/178 (76.97%), Postives = 158/178 (88.76%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            ETF FQAEI+QLLSLIINT YSNKEIFLREL+SN+SDALDKIR+ESL+D SKLD   +L I IIPDK NKTLTI D+GIGMTKADLVNNLGTIARSGTK+FMEAL AGAD+SMIGQFGVGFYSAYLVA+RV V +K+NDDEQYIWES AGG+F ++ D +G  +GRGTK+ L+LK++Q
Sbjct:    3 ETFEFQAEISQLLSLIINTVYSNKEIFLRELVSNASDALDKIRYESLSDPSKLDTGKDLRIDIIPDKENKTLTIQDTGIGMTKADLVNNLGTIARSGTKQFMEALTAGADISMIGQFGVGFYSAYLVADRVTVVSKNNDDEQYIWESSAGGTFNISPD-NGPSIGRGTKIILHLKDEQ 179          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP82_AJECA (Heat shock protein 82 OS=Ajellomyces capsulata GN=HSP82 PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.712e-71
Identity = 136/179 (75.98%), Postives = 156/179 (87.15%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            +ETF FQAEI+QLLSLIINT YSNKEIFLRELISN SDALDKIR+++L+D SKL+   +L I I PDK NKTLTI D+GIGMTKADLVNNLGTIARSGTK+FMEAL AGAD+SMIGQFGVGFYSAYLVA++V V +K NDDEQYIWES AGG+F VT+D  G  +GRGTKM L+LK++Q
Sbjct:    3 SETFEFQAEISQLLSLIINTVYSNKEIFLRELISNFSDALDKIRYKALSDPSKLESDKDLRIDITPDKENKTLTIRDTGIGMTKADLVNNLGTIARSGTKQFMEALTAGADISMIGQFGVGFYSAYLVADKVTVISKSNDDEQYIWESNAGGTFKVTQDDDGRAIGRGTKMILHLKDEQ 181          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 4.982e-71
Identity = 132/182 (72.53%), Postives = 157/182 (86.26%), Query Frame = 1
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            M++TETF F+AEI+QL+SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D   LD + +LFIRI PDK NK L+I D+GIGMTK DL+NNLG IA+SGTK+FMEA  +GAD+SMIGQFGVGFYSAYLVA++V V +KHNDDEQYIWES AGGSFTVT D  G  L RGT++ L++KEDQ
Sbjct:    1 MSNTETFKFEAEISQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPHALDAEKDLFIRITPDKENKILSIRDTGIGMTKNDLINNLGVIAKSGTKQFMEAAASGADISMIGQFGVGFYSAYLVADKVQVVSKHNDDEQYIWESSAGGSFTVTLDTDGPRLLRGTEIRLFMKEDQ 182          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP90_CANAL (Heat shock protein 90 homolog OS=Candida albicans GN=HSP90 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.982e-71
Identity = 136/183 (74.32%), Postives = 154/183 (84.15%), Query Frame = 1
Query:  112 AMADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            A A  ET  F AEI+QL+SLIINT YSNKEIFLRELISN+SDALDKIR+++L+D S+L+ +PELFIRIIP K  K L I DSGIGMTKADLVNNLGTIA+SGTK FMEAL AGADVSMIGQFGVGFYS +LVA+ V V +KHNDDEQY+WES AGG FTVT D + E LGRGT + L+LKEDQ
Sbjct:    2 ADAKVETHEFTAEISQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPSQLESEPELFIRIIPQKDQKVLEIRDSGIGMTKADLVNNLGTIAKSGTKSFMEALSAGADVSMIGQFGVGFYSLFLVADHVQVISKHNDDEQYVWESNAGGKFTVTLDETNERLGRGTMLRLFLKEDQ 184          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 6.507e-71
Identity = 135/178 (75.84%), Postives = 160/178 (89.89%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+++LT+ ++L+   EL+I+I P+KA+KTLTI+D+GIGMTKADLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSA+LVA++VVV +KHNDD+ Y WES AGGSF + R V+   L RGTK+TLY+KEDQ
Sbjct:    8 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYQALTEPAELETGKELYIKITPNKADKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAFLVADKVVVASKHNDDDCYQWESSAGGSF-IIRQVNDPELTRGTKITLYIKEDQ 184          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 266.929 bits (681), Expect = 8.499e-71
Identity = 134/179 (74.86%), Postives = 155/179 (86.59%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            TETFAFQAEINQL+SLIINTFYSNKEIFLRELISN+SDA DKIR++SLTD S L   P L IR++PDK NKTLT+ D+GIGMTKADLVNNLGTIARSGTK FMEAL+AG D+SMIGQFGVGFYSAYLVA+RV VT+K+N DE Y+WES A G+FT+T     + + RGT++TL+LKEDQ
Sbjct:    2 TETFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLGESPRLCIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGGDMSMIGQFGVGFYSAYLVADRVTVTSKNNSDESYVWESSACGTFTITSTPESD-MKRGTRITLHLKEDQ 179          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.450e-70
Identity = 135/179 (75.42%), Postives = 156/179 (87.15%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            TETFAFQAEINQL+SLIINTFYSNKEIFLRELISNSSDA DKIR++SLT++S L  +P L IR+IPD+ NKTLT+ DSGIGMTKADLVNNLGTIARSGTK FMEAL+AG D+SMIGQFGVGFYSAYLVA+RV V +K+N+D+ Y WES AGG+FTVT     + L RGT++ L+LKEDQ
Sbjct:    2 TETFAFQAEINQLMSLIINTFYSNKEIFLRELISNSSDACDKIRYQSLTNQSVLGDEPHLRIRVIPDRVNKTLTVEDSGIGMTKADLVNNLGTIARSGTKSFMEALEAGGDMSMIGQFGVGFYSAYLVADRVTVVSKNNEDDAYTWESSAGGTFTVTSTPDCD-LKRGTRIVLHLKEDQ 179          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 1.893e-70
Identity = 134/184 (72.83%), Postives = 158/184 (85.87%), Query Frame = 1
Query:  112 AMADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG-ADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            A +  E F FQAEINQL+SLIINTFYSNKE+FLRELISN+SDALDKIR++SLTD S L+ + EL I+IIPDK  KTLT++DSGIGMTK D+V NLGTIARSGTK FME LQ+G AD+SMIGQFGVGFYSAYLVA+ V+V +K+NDDEQY+WES AGG FT+  D + EPLGRGTK+ L++KEDQ
Sbjct:    2 AESQVERFTFQAEINQLMSLIINTFYSNKEVFLRELISNASDALDKIRYQSLTDASVLESKTELEIKIIPDKTAKTLTLIDSGIGMTKTDMVKNLGTIARSGTKNFMEQLQSGAADISMIGQFGVGFYSAYLVADTVIVHSKNNDDEQYVWESSAGGEFTIALDHT-EPLGRGTKIVLHMKEDQ 184          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.230e-70
Identity = 134/180 (74.44%), Postives = 159/180 (88.33%), Query Frame = 1
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEI+LRELISN+SDALDKIR+++LT+ S+LD   ELFI+I P+K  KTLTI+D+GIGMTKADLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSA+LVA++VVVT+K+NDD+ Y WES AGGSF V R  +   L RGTK+T+Y+KEDQ
Sbjct:    4 NAETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGKELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAFLVADKVVVTSKNNDDDSYQWESSAGGSF-VVRPYNDPELTRGTKITMYIKEDQ 182          
The following BLAST results are available for this feature:
BLAST of FC920358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HSP83_DROPE3.121e-7376.67Heat shock protein 83 (Fragment) OS=Drosophila per... [more]
HSP90_PODAN1.712e-7176.97Heat shock protein 90 homolog OS=Podospora anserin... [more]
HSP82_AJECA1.712e-7175.98Heat shock protein 82 OS=Ajellomyces capsulata GN=... [more]
HSP90_SCHPO4.982e-7172.53Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]
HSP90_CANAL4.982e-7174.32Heat shock protein 90 homolog OS=Candida albicans ... [more]
HSP90_BRUPA6.507e-7175.84Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
HSP83_LEIIN8.499e-7174.86Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
HSP83_TRYBB1.450e-7075.42Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HSC90_DICDI1.893e-7072.83Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HSP90_CAEBR3.230e-7074.44Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]

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Properties
Property NameValue
Genbank descriptionC32007C07EF RVDevelop1 Citrus clementina cDNA clone C32007C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920358 ID=FC920358; Name=FC920358; organism=Citrus clementina; type=EST; length=765bp
TTCGCTTTATAAAAATCTCTCTGCGCAAGCAAAAGCAAAAGCAAAAGCAA
TTCTCTTCGGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTATTCTGTGT
TGTGAGGAAGAGCAATGGCGGACACTGAGACATTCGCATTCCAGGCAGAG
ATCAACCAGCTGTTGAGTTTGATCATCAATACTTTCTACAGCAACAAGGA
GATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGATGCTTTGGACAAGA
TTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCGATGGACAACCAGAG
CTTTTCATCAGAATCATCCCTGACAAGGCTAACAAGACGCTCACTATTGT
TGATAGCGGTATCGGCATGACCAAAGCAGATTTGGTAAATAATTTGGGTA
CAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGGCTTTGCAGGCCGGG
GCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGTTTCTATTCGGCTTA
CCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCACAATGACGATGAGC
AATACATCTGGGAATCACAAGCTGGTGGTTCTTTCACTGTTACCAGGGAT
GTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATGACTCTGTACCTCAA
GGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAATTAGGACCTTGTGAA
GAGCACTCTGAATCATCAGCTCCCCTATTACTCTGGACTGAGAGACACTG
AGAAGAATTAGCGAT
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