FC920358

Overview
NameFC920358
Unique NameFC920358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length765
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 9.396e-70
Identity = 134/179 (74.86%), Postives = 156/179 (87.15%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            TETFAFQAEINQL+SLIINTFYSNKEIFLRELISNSSDA DKIR++SLT+++ L  +  L IR++PDKANKTLT+ D+GIGMTKA+LVNNLGTIARSGTK FMEAL+AG D+SMIGQFGVGFYSAYLVA+RV V +K+NDDE Y WES AGG+FTVT     + L RGT++ L+LKEDQ
Sbjct:    2 TETFAFQAEINQLMSLIINTFYSNKEIFLRELISNSSDACDKIRYQSLTNQAVLGDESHLRIRVVPDKANKTLTVEDTGIGMTKAELVNNLGTIARSGTKAFMEALEAGGDMSMIGQFGVGFYSAYLVADRVTVVSKNNDDEAYTWESSAGGTFTVTPTPDCD-LKRGTRIVLHLKEDQ 179          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP83_DROPB (Heat shock protein 83 (Fragment) OS=Drosophila pseudoobscura bogotana GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 9.396e-70
Identity = 134/180 (74.44%), Postives = 152/180 (84.44%), Query Frame = 1
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ S TD  KL          IP+K   TLTI+D+GI MTK+DLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYL+A+RV VT+K+NDDEQY+WES AGGSFTV  D + EPLGRGTK+ LY+KEDQ
Sbjct:    4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYXSXTDPXKLXXXXXXXXXXIPNKTAGTLTIIDTGIXMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKAD-NSEPLGRGTKIXLYIKEDQ 182          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.227e-69
Identity = 133/182 (73.08%), Postives = 151/182 (82.97%), Query Frame = 1
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            M+  ET+ FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D   L+  PELFIR+ P    K L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIGQFGVGFYS +LVA+RV V +KHNDDEQYIWES AGGSFTVT D   E +GRGT + L+LKEDQ
Sbjct:    1 MSSQETYEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPKVLESDPELFIRLTPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKHNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKEDQ 182          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP90_CAEEL (Heat shock protein 90 OS=Caenorhabditis elegans GN=daf-21 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.039e-68
Identity = 131/180 (72.78%), Postives = 158/180 (87.78%), Query Frame = 1
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEI+LRELISN+SDALDKIR+++LT+ S+LD   ELFI+I P+K  KTLTI+D+GIGMTKADLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSA+LVA++VVVT+K+NDD+ Y WES AGGSF V R  +   + RGTK+ +++KEDQ
Sbjct:    4 NAETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGKELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAFLVADKVVVTSKNNDDDSYQWESSAGGSF-VVRPFNDPEVTRGTKIVMHIKEDQ 182          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.357e-68
Identity = 127/180 (70.56%), Postives = 154/180 (85.56%), Query Frame = 1
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            D E +AF A+I+QLLSLIIN FYSNKEIFLRELISN+SDAL+KIR+E++ D  +++ QP+ +IR+  DK N TLTI DSGIGMTKADLVNNLGTIA+SGT+ FMEALQAG+D+SMIGQFGVGFYSAYLVA++V V +K+N D+QY+WES A G FTV RD S EPL RGT++ L+LKEDQ
Sbjct:    9 DQEVYAFNADISQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIEDQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMSMIGQFGVGFYSAYLVADKVTVVSKNNADDQYVWESSASGHFTVKRDDSHEPLKRGTRLILHLKEDQ 188          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.023e-68
Identity = 131/179 (73.18%), Postives = 151/179 (84.36%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            +ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D  +L+ +P+LFIRI P    K L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIGQFGVGFYS +LVA+RV V +K NDDEQYIWES AGGSFTVT D   E +GRGT + L+LK+DQ
Sbjct:    3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQ 181          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 258.07 bits (658), Expect = 3.948e-68
Identity = 126/180 (70.00%), Postives = 154/180 (85.56%), Query Frame = 1
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            D E +AF A+I+QLLSLIIN FYSNKEIFLRELISN+SDAL+KIR+E++ D  +++ QP+ +IR+  DK N TLTI DSGIGMTKADLVNNLGTIA+SGT+ FMEALQAG+D+SMIGQFGVGFYSAYLVA++V V +K+N D+QY+WES A G FTV +D S EPL RGT++ L+LKEDQ
Sbjct:    9 DQEVYAFNADISQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIEDQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMSMIGQFGVGFYSAYLVADKVTVVSKNNADDQYVWESTASGHFTVKKDDSHEPLKRGTRLILHLKEDQ 188          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP83_LEIAM (Heat shock protein 83 OS=Leishmania amazonensis GN=HSP83 PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 6.734e-68
Identity = 129/179 (72.07%), Postives = 153/179 (85.47%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            TETFAFQAEINQL+SLIINTFYSNKEIFLR++ISN+SDA DKIR++SLTD S L     L +R++PDK NKTLT+ D+GIGMTKADLVNNLGTIARSGTK FMEAL+AGAD+SMIGQFGVGFYSAYLVA+RV VT+K+N DE Y+WES AGG+FT+T     + +    ++TL+LKEDQ
Sbjct:    2 TETFAFQAEINQLMSLIINTFYSNKEIFLRDVISNASDACDKIRYQSLTDPSVLGDATRLCVRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGADMSMIGQFGVGFYSAYLVADRVTVTSKNNSDEVYVWESSAGGTFTITSAPESD-MKLPARITLHLKEDQ 179          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 256.914 bits (655), Expect = 8.795e-68
Identity = 129/178 (72.47%), Postives = 151/178 (84.83%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR+++L+D  +L+ +P+LFIRI P    K L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIGQFGVGFYS +LVA+RV V +K+N+DEQYIWES AGGSFTVT D   E +GRGT + L+LK+DQ
Sbjct:    4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPKQLETEPDLFIRITPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKNNEDEQYIWESNAGGSFTVTLDEVNERIGRGTVLRLFLKDDQ 181          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: H90B4_HUMAN (Putative heat shock protein HSP 90-beta 4 OS=Homo sapiens GN=HSP90AB4P PE=5 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.662e-58
Identity = 118/166 (71.08%), Postives = 139/166 (83.73%), Query Frame = 1
Query:  163 LSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            +SLIINTFYSNKEIFL+ELISN+SDALDKIR+ESLTD SKLDG  EL I IIP+     LT+V++GIGMTKADL+NNLG IA+SGT+ FMEA Q+ A++SMIGQFGVGFYSAYLVAE+V + TKHND+EQY W S AG SFT+  D  GEP+ R TK+ L+LKEDQ
Sbjct:    1 MSLIINTFYSNKEIFLQELISNASDALDKIRYESLTDPSKLDGGKELKIDIIPNPRECILTLVNTGIGMTKADLINNLGAIAKSGTEAFMEAFQSCAEISMIGQFGVGFYSAYLVAEKVAI-TKHNDEEQYSWVSSAGSSFTLHVD-HGEPIDRDTKVILHLKEDQ 164          
The following BLAST results are available for this feature:
BLAST of FC920358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HSP85_TRYCR9.396e-7074.86Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]
HSP83_DROPB9.396e-7074.44Heat shock protein 83 (Fragment) OS=Drosophila pse... [more]
HSP82_ASHGO1.227e-6973.08Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
HSP90_CAEEL1.039e-6872.78Heat shock protein 90 OS=Caenorhabditis elegans GN... [more]
HSP90_THEAN1.357e-6870.56Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP82_YEAST3.023e-6873.18ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSP90_THEPA3.948e-6870.00Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
HSP83_LEIAM6.734e-6872.07Heat shock protein 83 OS=Leishmania amazonensis GN... [more]
HSC82_YEAST8.795e-6872.47ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
H90B4_HUMAN1.662e-5871.08Putative heat shock protein HSP 90-beta 4 OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionC32007C07EF RVDevelop1 Citrus clementina cDNA clone C32007C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920358 ID=FC920358; Name=FC920358; organism=Citrus clementina; type=EST; length=765bp
TTCGCTTTATAAAAATCTCTCTGCGCAAGCAAAAGCAAAAGCAAAAGCAA
TTCTCTTCGGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTATTCTGTGT
TGTGAGGAAGAGCAATGGCGGACACTGAGACATTCGCATTCCAGGCAGAG
ATCAACCAGCTGTTGAGTTTGATCATCAATACTTTCTACAGCAACAAGGA
GATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGATGCTTTGGACAAGA
TTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCGATGGACAACCAGAG
CTTTTCATCAGAATCATCCCTGACAAGGCTAACAAGACGCTCACTATTGT
TGATAGCGGTATCGGCATGACCAAAGCAGATTTGGTAAATAATTTGGGTA
CAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGGCTTTGCAGGCCGGG
GCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGTTTCTATTCGGCTTA
CCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCACAATGACGATGAGC
AATACATCTGGGAATCACAAGCTGGTGGTTCTTTCACTGTTACCAGGGAT
GTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATGACTCTGTACCTCAA
GGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAATTAGGACCTTGTGAA
GAGCACTCTGAATCATCAGCTCCCCTATTACTCTGGACTGAGAGACACTG
AGAAGAATTAGCGAT
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