FC920358

Overview
NameFC920358
Unique NameFC920358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length765
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.466e-56
Identity = 119/180 (66.11%), Postives = 136/180 (75.56%), Query Frame = 1
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSN+EIFL+ELISN+SDALDKIR+ESLTD SKLD   EL I IIP+   +TL +VD+GIGMTKADL+NNL TIA+SGTK  MEALQ                     AE++VV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ
Sbjct:   11 EVETFAFQAEIAQLISLIINTFYSNEEIFLQELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLALVDTGIGMTKADLINNLRTIAKSGTKACMEALQ---------------------AEKLVVITKHNDDEQYAWESSAGGSFTVHAD-HGEPIGRGTKVILHLKEDQ 168          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.466e-56
Identity = 107/179 (59.78%), Postives = 141/179 (78.77%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD--GQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            E F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF +LTDK  +      +L I+I  DK NK L+I D G+GMTK DL+ NLGTIA+SGT  F+E +Q G D+++IGQFGVGFYS YLVA+ V V +KHNDD+QY+WES+A GSF ++ D   EPLGRGT++ L+L+++
Sbjct:   78 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEVMGEGDTAKLEIQIKLDKENKILSIRDRGVGMTKEDLIKNLGTIAKSGTSAFVEKMQTGGDLNLIGQFGVGFYSVYLVADYVEVVSKHNDDKQYVWESKADGSFAISEDTWNEPLGRGTEIKLHLRDE 256          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.913e-56
Identity = 108/182 (59.34%), Postives = 142/182 (78.02%), Query Frame = 1
Query:  118 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD--GQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            ++ E F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF +LTDK  L      +L I+I  DKA K L+I D GIGMTK DL+ NLGTIA+SGT  F+E +Q+  D+++IGQFGVGFYSAYLVA+ + V +KHNDD QY+WES+A G F V+ D   EPLGRGT++ L+L+++
Sbjct:   74 SNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKDVLGEGDTAKLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQSSGDLNLIGQFGVGFYSAYLVADYIEVISKHNDDSQYVWESKANGKFAVSEDTWNEPLGRGTEIRLHLRDE 255          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.247e-55
Identity = 108/182 (59.34%), Postives = 141/182 (77.47%), Query Frame = 1
Query:  118 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD--GQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            +D E F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF +LTDK  L      +L I+I  DK  K L+I D GIGMTK DL+ NLGTIA+SGT  F+E +Q   D+++IGQFGVGFYS YLV + V V +KHNDD+QYIWES+A G+F ++ DV  EPLGRGT++ L+L+++
Sbjct:   75 SDAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEILGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVPDYVEVISKHNDDKQYIWESKADGAFAISEDVWNEPLGRGTEIRLHLRDE 256          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: ENPL_MACFA (Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.037e-52
Identity = 107/183 (58.47%), Postives = 138/183 (75.41%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFM----EALQAGADVS-MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            +E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L G  EL ++I  DK    L + D+G+GMT+ +LV NLGTIA+SGT EF+    EA + G   S +IGQFGVGFYSA+LVA++V+VT+KHN+D Q+IWES +   F+V  D  G  LGRGT +TL LKE+
Sbjct:   73 SEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALSGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEE 254          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: ENPL_HUMAN (Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.037e-52
Identity = 107/183 (58.47%), Postives = 138/183 (75.41%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFM----EALQAGADVS-MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            +E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L G  EL ++I  DK    L + D+G+GMT+ +LV NLGTIA+SGT EF+    EA + G   S +IGQFGVGFYSA+LVA++V+VT+KHN+D Q+IWES +   F+V  D  G  LGRGT +TL LKE+
Sbjct:   73 SEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALSGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEE 254          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: ENPL_CHICK (Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.037e-52
Identity = 107/183 (58.47%), Postives = 136/183 (74.32%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVS-----MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            +E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L G  EL ++I  DK    L + D+GIGMTK +L+ NLGTIA+SGT EF+  +    D S     +IGQFGVGFYSA+LVA+RV+VT+KHN+D Q+IWES +   F+V  D  G  LGRGT +TL LKE+
Sbjct:   72 SEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNMLHVTDTGIGMTKEELIKNLGTIAKSGTSEFLNKMTEMQDDSQSTSELIGQFGVGFYSAFLVADRVIVTSKHNNDTQHIWESDS-NEFSVIDDPRGNTLGRGTTITLVLKEE 253          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: ENPL_PIG (Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3)

HSP 1 Score: 204.527 bits (519), Expect = 5.180e-52
Identity = 107/183 (58.47%), Postives = 138/183 (75.41%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFM----EALQAGADVS-MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            +E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L G  EL ++I  DK    L + D+G+GMT+ +LV NLGTIA+SGT EF+    EA + G   S +IGQFGVGFYSA+LVA++V+VT+KHN+D Q+IWES +   F+V  D  G  LGRGT +TL LKE+
Sbjct:   73 SEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMAEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEE 254          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: ENPL_MOUSE (Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 5.180e-52
Identity = 107/183 (58.47%), Postives = 138/183 (75.41%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFM----EALQAGADVS-MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            +E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L G  EL ++I  DK    L + D+G+GMT+ +LV NLGTIA+SGT EF+    EA + G   S +IGQFGVGFYSA+LVA++V+VT+KHN+D Q+IWES +   F+V  D  G  LGRGT +TL LKE+
Sbjct:   73 SEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEE 254          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: ENPL_CANFA (Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.180e-52
Identity = 107/183 (58.47%), Postives = 138/183 (75.41%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFM----EALQAGADVS-MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            +E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L G  EL ++I  DK    L + D+G+GMT+ +LV NLGTIA+SGT EF+    EA + G   S +IGQFGVGFYSA+LVA++V+VT+KHN+D Q+IWES +   F+V  D  G  LGRGT +TL LKE+
Sbjct:   73 SEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEE 254          
The following BLAST results are available for this feature:
BLAST of FC920358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
H90B3_HUMAN3.466e-5666.11Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]
ENPL_HORVU3.466e-5659.78Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
ENPL_ARATH5.913e-5659.34Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
ENPL_CATRO2.247e-5559.34Endoplasmin homolog OS=Catharanthus roseus GN=HSP9... [more]
ENPL_MACFA3.037e-5258.47Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2... [more]
ENPL_HUMAN3.037e-5258.47Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1[more]
ENPL_CHICK3.037e-5258.47Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1[more]
ENPL_PIG5.180e-5258.47Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3[more]
ENPL_MOUSE5.180e-5258.47Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2[more]
ENPL_CANFA5.180e-5258.47Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC32007C07EF RVDevelop1 Citrus clementina cDNA clone C32007C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920358 ID=FC920358; Name=FC920358; organism=Citrus clementina; type=EST; length=765bp
TTCGCTTTATAAAAATCTCTCTGCGCAAGCAAAAGCAAAAGCAAAAGCAA
TTCTCTTCGGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTATTCTGTGT
TGTGAGGAAGAGCAATGGCGGACACTGAGACATTCGCATTCCAGGCAGAG
ATCAACCAGCTGTTGAGTTTGATCATCAATACTTTCTACAGCAACAAGGA
GATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGATGCTTTGGACAAGA
TTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCGATGGACAACCAGAG
CTTTTCATCAGAATCATCCCTGACAAGGCTAACAAGACGCTCACTATTGT
TGATAGCGGTATCGGCATGACCAAAGCAGATTTGGTAAATAATTTGGGTA
CAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGGCTTTGCAGGCCGGG
GCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGTTTCTATTCGGCTTA
CCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCACAATGACGATGAGC
AATACATCTGGGAATCACAAGCTGGTGGTTCTTTCACTGTTACCAGGGAT
GTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATGACTCTGTACCTCAA
GGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAATTAGGACCTTGTGAA
GAGCACTCTGAATCATCAGCTCCCCTATTACTCTGGACTGAGAGACACTG
AGAAGAATTAGCGAT
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