FC920358

Overview
NameFC920358
Unique NameFC920358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length765
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: ENPL_BOVIN (Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.180e-52
Identity = 107/183 (58.47%), Postives = 138/183 (75.41%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFM----EALQAGADVS-MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            +E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L G  EL ++I  DK    L + D+G+GMT+ +LV NLGTIA+SGT EF+    EA + G   S +IGQFGVGFYSA+LVA++V+VT+KHN+D Q+IWES +   F+V  D  G  LGRGT +TL LKE+
Sbjct:   73 SEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEE 254          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: ENPL_RAT (Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.154e-51
Identity = 106/183 (57.92%), Postives = 138/183 (75.41%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFM----EALQAGADVS-MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            +E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L G  EL ++I  D+    L + D+G+GMT+ +LV NLGTIA+SGT EF+    EA + G   S +IGQFGVGFYSA+LVA++V+VT+KHN+D Q+IWES +   F+V  D  G  LGRGT +TL LKE+
Sbjct:   73 SEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDREKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEE 254          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: ENPL_DICDI (Endoplasmin homolog OS=Dictyostelium discoideum GN=grp94 PE=2 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 2.571e-51
Identity = 104/180 (57.78%), Postives = 136/180 (75.56%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDG--QPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVS-MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            E F FQ E+N+L+++IIN+ YS KEIFLRELISN+SDALDKIRF +LT+   L    Q  L I I  DKAN  L I D G+GMTK +LV NLGTIA+SGTKEF++ +   A+ S +IGQFGVGFYS +LVA+ VVVT+K NDD+QY+W S +  S+T+ +D  G  LGRGT+++L++K+D
Sbjct:   50 EKFTFQTEVNKLMNIIINSLYSKKEIFLRELISNASDALDKIRFLALTNADLLGEGEQSNLDIHIKIDKANNVLHITDRGVGMTKDELVRNLGTIAQSGTKEFIKKVSDSAESSNLIGQFGVGFYSLFLVADSVVVTSKSNDDDQYVWTSDSQSSYTIAKDPKGNTLGRGTRISLHIKDD 229          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: ENPL_PONAB (Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.358e-51
Identity = 106/183 (57.92%), Postives = 137/183 (74.86%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFM----EALQAGADVS-MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            +E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L G  EL ++I  DK    L + D+G+GMT+ +LV NLGTIA+SGT EF+    EA + G   S +IGQFGVGF SA+LVA++V+VT+KHN+D Q+IWES +   F+V  D  G  LGRGT +TL LKE+
Sbjct:   73 SEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALSGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFCSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEE 254          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_MYXXD (Chaperone protein htpG OS=Myxococcus xanthus (strain DK 1622) GN=htpG PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.332e-50
Identity = 110/183 (60.11%), Postives = 138/183 (75.41%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL-QAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQ--YIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            ET AFQAEINQLLSL+IN+ YS+KEIFLREL+SN+SDALDK+RF ++T+   L  +P L +R+IPD+A  TLTI D+GIGM+  +LV NLGTIA SG++EF+EAL Q G   D+ +IGQFGVGFYSAYLVA+RV V ++     Q  + W S+A GSFTV      E   RGT +TL+LKEDQ
Sbjct:   10 ETHAFQAEINQLLSLVINSLYSHKEIFLRELVSNASDALDKLRFRAITEPELLADEPALELRLIPDEAKGTLTIEDTGIGMSHDELVKNLGTIAHSGSREFIEALAQKGQQKDMQLIGQFGVGFYSAYLVADRVEVVSRAAGQGQSAWRWTSEAKGSFTVE---PAERAARGTSITLHLKEDQ 189          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: ENPL_RABIT (Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.104e-49
Identity = 102/176 (57.95%), Postives = 131/176 (74.43%), Query Frame = 1
Query:  145 AEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFM----EALQAGADVS-MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            AE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD+  L G  EL ++I  DK    L + D+G+GMT+ +LV NLGTIA+SGT EF+    EA + G   S +IGQFGVGFYSA+LVA++V+VT+KHN+D Q+IWES +   F+V  D  G  LGRGT +TL LKE+
Sbjct:    1 AEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDEQALSGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEE 175          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_DESHY (Chaperone protein htpG OS=Desulfitobacterium hafniense (strain Y51) GN=htpG PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.975e-44
Identity = 95/186 (51.08%), Postives = 137/186 (73.66%), Query Frame = 1
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL-QAG--ADVSMIGQFGVGFYSAYLVAERVVVTTK--HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            M+  ET  FQ EI QLL ++IN+ Y+++EIFLRELISN++DA +K+R+  L+ ++  D +  L IRI PD+  KTLTI D+GIGMTK DL+ N+GTIA SG+K F++ L +AG   DV++IGQFGVGFYSA++VA++V +T++    D + Y WES   GS++++ ++    L RGT +TL+LKED
Sbjct:    1 MSQIETKEFQTEIRQLLDIVINSLYTDREIFLRELISNAADASEKVRYMQLSGQNVKDQELPLEIRITPDENAKTLTIADAGIGMTKEDLIENIGTIAHSGSKAFVQRLAEAGDKKDVNLIGQFGVGFYSAFMVADKVSLTSRSYEPDAQGYRWESDGRGSYSISEEMD---LPRGTSITLHLKED 183          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_THICR (Chaperone protein htpG OS=Thiomicrospira crunogena (strain XCL-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.192e-44
Identity = 93/186 (50.00%), Postives = 137/186 (73.66%), Query Frame = 1
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDD---EQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            M+ TET AFQ E+NQLL L+I+  YSNKEIFLREL+SN+SDALDK+RFES+++ +  +G+ EL I++  DK  +T++I+D+GIGMT+ +++ N+GTIA SGTK+F+E +      D  +IGQFGVGFY++++VA++V +TT+   D   E   WES   G +T+    + E   +GT++TL+LKED
Sbjct:    1 MSHTETHAFQTEVNQLLKLMIHALYSNKEIFLRELVSNASDALDKLRFESVSNDALSEGESELAIQVGFDKEARTVSIIDNGIGMTRDEVIANIGTIANSGTKKFLENMTGDQAKDSHLIGQFGVGFYASFIVADKVTLTTRKAGDDKSEGTRWESAGEGEYTLE---TVEKETKGTEITLHLKED 183          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_ROSDO (Chaperone protein htpG OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=htpG PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.192e-44
Identity = 92/180 (51.11%), Postives = 127/180 (70.56%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            ETF+FQ E+ QLL ++  + YSN+EIFLREL+SN+SDA DK+R+E+LT+ S      E  I +  DK  KTL++ D+GIGM   DL++ LGTIARSGT  F++AL++    D+ +IGQFGVGFYSA++VAERV V+T K  +DE ++W S   G F++     GE    GT +TL+LK+D
Sbjct:    8 ETFSFQTEVGQLLDIVAGSLYSNREIFLRELVSNASDACDKLRYEALTNPSLAQNADEFAISLAVDKKAKTLSVSDNGIGMNHGDLLDTLGTIARSGTGAFLDALKSEEKGDIGLIGQFGVGFYSAFMVAERVDVLTRKAGEDESWLWSSDGKGEFSIE---PGERAQSGTTVTLHLKKD 184          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_RALEJ (Chaperone protein htpG OS=Ralstonia eutropha (strain JMP134) GN=htpG PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.781e-44
Identity = 96/186 (51.61%), Postives = 128/186 (68.82%), Query Frame = 1
Query:  118 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHND---DEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            A  ET +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE++ + S L+   +L IRI  D A +TL I D+GIGM++ + + NLGTIARSGTKEF + L      D ++IGQFGVGFYSA++VA++V V T+      DE   WES   G FTV      E   RGT +TL+++E +
Sbjct:    3 APHETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDATDKLRFEAIANPSLLENDADLAIRIEADTAARTLKITDNGIGMSRDEAIRNLGTIARSGTKEFFQQLSGDQQKDAALIGQFGVGFYSAFIVADKVTVETRRAGVAADEAVRWESTGDGEFTVDAITRAE---RGTTITLHMREGE 185          
The following BLAST results are available for this feature:
BLAST of FC920358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
ENPL_BOVIN5.180e-5258.47Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1[more]
ENPL_RAT1.154e-5157.92Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 S... [more]
ENPL_DICDI2.571e-5157.78Endoplasmin homolog OS=Dictyostelium discoideum GN... [more]
ENPL_PONAB3.358e-5157.92Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1[more]
HTPG_MYXXD6.332e-5060.11Chaperone protein htpG OS=Myxococcus xanthus (stra... [more]
ENPL_RABIT4.104e-4957.95Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN... [more]
HTPG_DESHY3.975e-4451.08Chaperone protein htpG OS=Desulfitobacterium hafni... [more]
HTPG_THICR5.192e-4450.00Chaperone protein htpG OS=Thiomicrospira crunogena... [more]
HTPG_ROSDO5.192e-4451.11Chaperone protein htpG OS=Roseobacter denitrifican... [more]
HTPG_RALEJ6.781e-4451.61Chaperone protein htpG OS=Ralstonia eutropha (stra... [more]

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Properties
Property NameValue
Genbank descriptionC32007C07EF RVDevelop1 Citrus clementina cDNA clone C32007C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920358 ID=FC920358; Name=FC920358; organism=Citrus clementina; type=EST; length=765bp
TTCGCTTTATAAAAATCTCTCTGCGCAAGCAAAAGCAAAAGCAAAAGCAA
TTCTCTTCGGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTATTCTGTGT
TGTGAGGAAGAGCAATGGCGGACACTGAGACATTCGCATTCCAGGCAGAG
ATCAACCAGCTGTTGAGTTTGATCATCAATACTTTCTACAGCAACAAGGA
GATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGATGCTTTGGACAAGA
TTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCGATGGACAACCAGAG
CTTTTCATCAGAATCATCCCTGACAAGGCTAACAAGACGCTCACTATTGT
TGATAGCGGTATCGGCATGACCAAAGCAGATTTGGTAAATAATTTGGGTA
CAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGGCTTTGCAGGCCGGG
GCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGTTTCTATTCGGCTTA
CCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCACAATGACGATGAGC
AATACATCTGGGAATCACAAGCTGGTGGTTCTTTCACTGTTACCAGGGAT
GTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATGACTCTGTACCTCAA
GGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAATTAGGACCTTGTGAA
GAGCACTCTGAATCATCAGCTCCCCTATTACTCTGGACTGAGAGACACTG
AGAAGAATTAGCGAT
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