FC920360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CALR_DICDI (Calreticulin OS=Dictyostelium discoideum GN=crtA PE=1 SV=3) HSP 1 Score: 243.432 bits (620), Expect = 7.812e-64 Identity = 112/187 (59.89%), Postives = 143/187 (76.47%), Query Frame = 3 Query: 102 VFFEERFDEGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEV-PCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPR 659 V F++ FD WESRWV SDW K++ +G+ +TAGKW GD N KGIQTSED RFYA+SA+FP FSNK K LV Q++VK+EQK+DCGG Y+KLL ++DQ F G++ YSIMFGPD+CG ++K+VH IL Y G N LIKKE+ ETDQLTH YT ++ PD TY +L+DN E Q+G+L DW+LLP + Sbjct: 21 VHFKDTFDNDWESRWVVSDWHKEDGKSGKLVHTAGKWFGDENQKGIQTSEDARFYAVSAKFPSFSNKGKDLVLQYTVKNEQKVDCGGSYIKLLPSKLDQSAFDGESEYSIMFGPDVCG-ASKRVHVILNYKGKNHLIKKEINKVETDQLTHQYTLVISPDNTYKVLVDNKEIQAGNLADDWELLPSK 206
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CALR_CHLRE (Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 6.613e-63 Identity = 115/189 (60.85%), Postives = 136/189 (71.96%), Query Frame = 3 Query: 105 FFEERFDEGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLL--SGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPR 659 +F+E FD W RW S WK + +AGE+ TAGKW GD DKGIQT D +F+AISA F N K V QFSVKHEQ LDCGGGY+K++ + E +FGGDTPYSIMFGPDICGYST+KVH ILTY G N LIKK++ ETDQLTHVYT +++PD TY +LID E SGSLY DWD+LPP+ Sbjct: 21 YFKETFDGSWADRWTKSSWKVSDGSAGEFKLTAGKWYGDAEADKGIQTGPDSKFFAISAPLATVFDNTGKDTVVQFSVKHEQDLDCGGGYIKVVPATSEKQMGEFGGDTPYSIMFGPDICGYSTRKVHVILTYKGKNYLIKKDIKAETDQLTHVYTLVIKPDNTYQVLIDLKEVASGSLYEDWDMLPPK 209
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CALR_CRIGR (Calreticulin OS=Cricetulus griseus GN=CALR PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 5.422e-57 Identity = 106/189 (56.08%), Postives = 136/189 (71.96%), Query Frame = 3 Query: 102 VFFEERFDEG--WESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPR 659 V+F+E+F +G W +RWV S K D G++ ++GK+ GD DKG+QTS+D RFYA+SA F FSNK +TLV QF+VKHEQ +DCGGGY+KL G +DQK GD+ Y+IMFGPDICG TKKVH I Y G N LI K++ C+ D+ TH+YT I+RPD TY + IDN + +SGSL DWD LPP+ Sbjct: 21 VYFKEQFLDGDDWTNRWVESKHKSD---FGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPGSLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPK 206
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CALR_RAT (Calreticulin OS=Rattus norvegicus GN=Calr PE=1 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.208e-56 Identity = 105/189 (55.56%), Postives = 136/189 (71.96%), Query Frame = 3 Query: 102 VFFEERFDEG--WESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPR 659 ++F+E+F +G W +RWV S K D G++ ++GK+ GD DKG+QTS+D RFYA+SA F FSNK +TLV QF+VKHEQ +DCGGGY+KL G +DQK GD+ Y+IMFGPDICG TKKVH I Y G N LI K++ C+ D+ TH+YT I+RPD TY + IDN + +SGSL DWD LPP+ Sbjct: 21 IYFKEQFLDGDAWTNRWVESKHKSD---FGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPGGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPK 206
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CALR_BOMMO (Calreticulin OS=Bombyx mori GN=crt PE=1 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.578e-56 Identity = 105/186 (56.45%), Postives = 136/186 (73.12%), Query Frame = 3 Query: 102 VFFEERF-DEGWESRWVTSDWKKDENTAGEWNYTAGKWNGDP-NDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLP 653 VFFEE+F D+ WES WV S+ E G++ TAGK+ DP +DKG++TSED RFYA+S +F FSN+ K LV QF+VKHEQ +DCGGGY+K+ +++QK G+TPY IMFGPDICG TKKVH I +Y G N LIKK++ C+ D TH+YT I++PD TY +LIDN + +SG L +DWD LP Sbjct: 21 VFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLP 204
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CALR_MACFU (Calreticulin OS=Macaca fuscata fuscata GN=CALR PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.515e-56 Identity = 104/189 (55.03%), Postives = 134/189 (70.90%), Query Frame = 3 Query: 102 VFFEERF--DEGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPR 659 V+F+E+F +GW SRW+ S K D G++ ++GK+ GD DKG+QTS+D RFYA+SA F FSNK +TLV QF+VKHEQ +DCGGGY+KL +DQ GD+ Y+IMFGPDICG TKKVH I Y G N LI K++ C+ D+ TH+YT I+RPD TY + IDN + +SGSL DWD LPP+ Sbjct: 21 VYFKEQFLDGDGWTSRWIESKHKSD---FGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPK 206
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CALR_MACFA (Calreticulin OS=Macaca fascicularis GN=CALR PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.515e-56 Identity = 104/189 (55.03%), Postives = 134/189 (70.90%), Query Frame = 3 Query: 102 VFFEERF--DEGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPR 659 V+F+E+F +GW SRW+ S K D G++ ++GK+ GD DKG+QTS+D RFYA+SA F FSNK +TLV QF+VKHEQ +DCGGGY+KL +DQ GD+ Y+IMFGPDICG TKKVH I Y G N LI K++ C+ D+ TH+YT I+RPD TY + IDN + +SGSL DWD LPP+ Sbjct: 21 VYFKEQFLDGDGWTSRWIESKHKSD---FGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPK 206
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CALR_HUMAN (Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.515e-56 Identity = 104/189 (55.03%), Postives = 134/189 (70.90%), Query Frame = 3 Query: 102 VFFEERF--DEGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPR 659 V+F+E+F +GW SRW+ S K D G++ ++GK+ GD DKG+QTS+D RFYA+SA F FSNK +TLV QF+VKHEQ +DCGGGY+KL +DQ GD+ Y+IMFGPDICG TKKVH I Y G N LI K++ C+ D+ TH+YT I+RPD TY + IDN + +SGSL DWD LPP+ Sbjct: 21 VYFKEQFLDGDGWTSRWIESKHKSD---FGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPK 206
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CALR_CERAE (Calreticulin OS=Cercopithecus aethiops GN=CALR PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.515e-56 Identity = 104/189 (55.03%), Postives = 134/189 (70.90%), Query Frame = 3 Query: 102 VFFEERF--DEGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPR 659 V+F+E+F +GW SRW+ S K D G++ ++GK+ GD DKG+QTS+D RFYA+SA F FSNK +TLV QF+VKHEQ +DCGGGY+KL +DQ GD+ Y+IMFGPDICG TKKVH I Y G N LI K++ C+ D+ TH+YT I+RPD TY + IDN + +SGSL DWD LPP+ Sbjct: 21 VYFKEQFLDGDGWTSRWIESKHKSD---FGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPK 206
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CALR_MOUSE (Calreticulin OS=Mus musculus GN=Calr PE=1 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 4.590e-56 Identity = 104/189 (55.03%), Postives = 136/189 (71.96%), Query Frame = 3 Query: 102 VFFEERFDEG--WESRWVTSDWKKDENTAGEWNYTAGKWNGD-PNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPR 659 ++F+E+F +G W +RWV S K D G++ ++GK+ GD DKG+QTS+D RFYA+SA+F FSNK +TLV QF+VKHEQ +DCGGGY+KL +DQK GD+ Y+IMFGPDICG TKKVH I Y G N LI K++ C+ D+ TH+YT I+RPD TY + IDN + +SGSL DWD LPP+ Sbjct: 21 IYFKEQFLDGDAWTNRWVESKHKSD---FGKFVLSSGKFYGDLEKDKGLQTSQDARFYALSAKFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPSGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPK 206 The following BLAST results are available for this feature:
BLAST of FC920360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920360 ID=FC920360; Name=FC920360; organism=Citrus clementina; type=EST; length=669bpback to top |