FC920360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CALX1_ARATH (Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.003e-23 Identity = 70/190 (36.84%), Postives = 99/190 (52.11%), Query Frame = 3 Query: 114 ERFDEGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSN-KDKTLVFQFSVKHEQKLDCGGGYMKLLSGEV---DQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNK------LIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLP 653 E FDE ++ RW+ S K+ + G W + + + D G+ SE R Y I E E N K+ T+V Q+ V+ ++ L+CGG Y+K L + + F ++PYSIMFGPD CG T KVH IL + +K D+L+HVYT IL+PD IL+D EK+ +L S D P Sbjct: 33 ESFDEPFDGRWIVS---KNSDYEGVWKHAKSEGH---EDYGLLVSEKARKYGIVKELDEPLNLKEGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMFGPDKCG-GTNKVHFILKHKNPKSGEYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKKKANLLSGEDFEP 215
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CLGN_MOUSE (Calmegin OS=Mus musculus GN=Clgn PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.690e-23 Identity = 69/204 (33.82%), Postives = 103/204 (50.49%), Query Frame = 3 Query: 102 VFFEERFDEGWESRWVTSDWKKDENTA------GEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS--GEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPP 656 V+F E FD G + WV S KKD+ + G W K N P D+G+ + +AI+A + F DK L+ Q+ V + +DCGG Y+KLL+ G++ + F T Y+IMFGPD CG K+H I + + +E + TD+ TH+YT ++ PD T+ +LID G+L D++PP Sbjct: 60 VYFTETFDSGNLAGWVLSKAKKDDMDSEIAIYDGRWEIEELKENQVPGDRGLVLKSKAKHHAIAAVLEKPFIFADKPLIVQYEVNFQDGIDCGGAYIKLLADTGDLILENFYDKTSYTIMFGPDKCG-EDYKLHLIFRHKHPKTGVFEEKHAKPPDVDLKEFFTDRKTHLYTLVMNPDDTFEVLIDQKVVNQGTLLD--DVVPP 260
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CLGN_HUMAN (Calmegin OS=Homo sapiens GN=CLGN PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.947e-22 Identity = 70/204 (34.31%), Postives = 99/204 (48.53%), Query Frame = 3 Query: 102 VFFEERFDEGWESRWVTSDWKKDENTA------GEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQ--KKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPP 656 V+F E FD G + WV S KKD+ G W K N P D+G+ + +AISA + F DK L+ Q+ V + +DCGG Y+KLL+ D + F T Y IMFGPD CG K+H I + + +E + TD+ TH+YT ++ PD T+ +L+D GSL D++PP Sbjct: 60 VYFAETFDSGRLAGWVLSKAKKDDMDEEISIYDGRWEIEELKENQVPGDRGLVLKSRAKHHAISAVLAKPFIFADKPLIVQYEVNFQDGIDCGGAYIKLLADTDDLILENFYDKTSYIIMFGPDKCG-EDYKLHFIFRHKHPKTGVFEEKHAKPPDVDLKKFFTDRKTHLYTLVMNPDDTFEVLVDQTVVNKGSLLE--DVVPP 260
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CALX_PEA (Calnexin homolog OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.947e-22 Identity = 72/192 (37.50%), Postives = 104/192 (54.17%), Query Frame = 3 Query: 108 FEERFDEGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVD---QKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNG--TNKLIKKEVP----CETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLP 653 F E FDE +++RW+ S K++ N G W ++ + + +D G+ SE R YAI E S KD T+V QF + + L+CGG Y+K L + K F ++ YSIMFGPD CG +T KVH I + T K ++ + +D+L+HVYT +L+ D SILID EK+ + S D P Sbjct: 41 FYESFDEDFDNRWIVSG-KEEYN--GVWKHSKSEGH---DDFGLLVSEPARKYAIVKELDAPVSLKDGTVVLQFETRLQNGLECGGAYIKYLQTQESGWKPKGFDNESGYSIMFGPDRCG-ATNKVHFIFRHKNPKTGKHVEHHLKFPPSVPSDKLSHVYTAVLKDDNEVSILIDGEEKKKANFLSSEDFEP 225
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CALX2_ARATH (Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g07340 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.811e-21 Identity = 69/194 (35.57%), Postives = 100/194 (51.55%), Query Frame = 3 Query: 114 ERFDEGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFP---EFSNKDKTLVFQFSVKHEQKLDCGGGYMKLL----SGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNK------LIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPP 656 E FDE ++ RWV S+ + + G W + + + +D G+ SE + Y I E + + T+V Q+ + ++ L+CGG Y+K L +G V Q F D+PYSIMFGPD CG +T KVH IL + +K D L+HVYT +L+ D IL+D EK+ G+L S D PP Sbjct: 33 ESFDEPFDGRWVVSEKAEYQ---GVWKHEKSEGH---DDYGLLVSEKAKKYGIVKELDVDEPLNLNEGTVVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQG-FDNDSPYSIMFGPDKCG-ATNKVHFILKHKNPKSGEFVEHHLKFPPSVPFDMLSHVYTAVLKSDNEVRILVDGEEKKKGNLLSAEDFEPP 218
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CALX_SCHPO (Calnexin homolog OS=Schizosaccharomyces pombe GN=cal1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.631e-19 Identity = 64/197 (32.49%), Postives = 101/197 (51.27%), Query Frame = 3 Query: 114 ERFDEGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN--------DKGIQTSEDYRFYAISAEFPEFSNK-DKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNG--TNKLIKKEVPCETDQL-----THVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPP 656 E+F W RW+ S K+ N E +Y G+W + + + G+ ++ +AIS EF E N+ +K LV Q+ V E+ L+CGG Y+KLL+ E + Y IMFGPD CG + +VH I + T + +K + L T++YT I++PD T+ + I+ + GSL+ +D +PP Sbjct: 44 EQFQGAWSERWIPSHAKRFVNGIEEMSYV-GEWTVEESSGPGALKGEAGLVMKDEAAHHAISYEFDEPINEPEKDLVVQYEVNPEEGLNCGGAYLKLLA-EPTHGEMSNSIDYRIMFGPDKCGVN-DRVHFIFKHKNPLTGEYSEKHLDSRPASLLKPGITNLYTLIVKPDQTFEVRINGDVVRQGSLF--YDFIPP 235
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CALX_CAEEL (Calnexin homolog OS=Caenorhabditis elegans GN=cnx-1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.997e-19 Identity = 67/193 (34.72%), Postives = 93/193 (48.19%), Query Frame = 3 Query: 144 WVTSDWKKDENTA------GEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEF-PEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS--GEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTY----NGTNKLIKKEVPCE------TDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWD--LLPPR 659 W+ S KKD+ + GEW+ A D G+ R +AI+A+ F+ T V Q+ +K E+ +CGGGY+KLLS E D F T Y+IMFGPD CG +T KVH I Y NGT P D TH++T +++P YS+ +D G++ SD L PP+ Sbjct: 75 WIKSLAKKDDVDSDIAKYNGEWSIGAPTKVSIEGDLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEKDLANFQDKTAYTIMFGPDKCG-ATGKVHLIFRYKNPINGTISEYHANQPTTIGSTYWDDHNTHLFTLVVKPTGEYSVSVDGKSLYYGNMMSDVTPALTPPK 266
BLAST of FC920360 vs. ExPASy Swiss-Prot
Match: CALR_PIG (Calreticulin (Fragment) OS=Sus scrofa GN=CALR PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.885e-17 Identity = 45/88 (51.14%), Postives = 61/88 (69.32%), Query Frame = 3 Query: 102 VFFEERF--DEGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDC 356 ++F+E+F +GW RW+ S K D G + ++GK+ GD DKG+QTS+D RFYA+SA F FSNK +TLV QF+VKHEQ +DC Sbjct: 21 IYFKEQFLDGDGWTDRWIESKHKPD---FGRFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQFTVKHEQNIDC 105 The following BLAST results are available for this feature:
BLAST of FC920360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920360 ID=FC920360; Name=FC920360; organism=Citrus clementina; type=EST; length=669bpback to top |