FC920364

Overview
NameFC920364
Unique NameFC920364
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14610 contig Ccv1_Contig14610:468..1178. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: ABCG9_DICDI (ABC transporter G family member 9 OS=Dictyostelium discoideum GN=abcG9 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.766e-33
Identity = 91/240 (37.92%), Postives = 131/240 (54.58%), Query Frame = 2
Query:    5 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNISVENQLGIDFAEVYADS-SLHQRNKELIK-ELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTS--KQQICRIF--LELCILFVF 706
            E+RKRLTI VELVA P I+F+DEPTSGLDA+++  +++ +R   D G  +VCTIHQPS  +FE FD +LLL +GG+ +Y G +G  S  L  YFE   GV    E  NPA ++LE     V  +  I++ EV+  S  L +  +EL   E S     S++   P +++     Q    + +    Y+R+P Y        ++  I  G  +WD    +S   Q+I  IF  L L IL +F
Sbjct:  968 EERKRLTIGVELVAKPHILFLDEPTSGLDAQSSYNIVKFIRKLADAGMPLVCTIHQPSSVLFEHFDRILLLAKGGKTVYFGDIGERSKTLTSYFER-QGVRPCTEFENPAEYILEATGAGVHGKTEINWPEVWKQSPELQEVRRELSSLEASGSSSSSNENGVPREFATSIWYQTWEVYKRMNVIYFRDPFYAYGSILQAVMTGIIVGFTFWDLKDSSSDMNQRIFFIFQALLLGILLIF 1206          
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: ABCGE_DICDI (ABC transporter G family member 14 OS=Dictyostelium discoideum GN=abcG14 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.373e-32
Identity = 88/241 (36.51%), Postives = 132/241 (54.77%), Query Frame = 2
Query:    5 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNISVENQLGIDFAEVYADS-SLHQRNKEL--IKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTS--KQQICRIF--LELCILFVF 706
            E+RKRLTI VELVA P I+F+DEPTSGLDA+++  +++ +R   D G  +VCTIHQPS  +FE FD +LLL +GG+ +Y G +G +S  L  YFE   GV    E+ NPA ++LE     V  +  +++ E +  S  L   ++EL  +KE               ++SQ    Q +  + +    +WR+P Y    F  + +  +  G  +W+    +S   Q+I  IF  L L IL +F
Sbjct:  951 EERKRLTIGVELVAKPQILFLDEPTSGLDAQSSYNIIKFIRKLADAGMPLVCTIHQPSSVLFEHFDRILLLAKGGKTVYFGDIGEKSKTLTSYFER-HGVRPCTESENPAEYILEATGAGVHGKSDVNWPETWKQSPELADISRELAALKEQGAQQYKIRSDGPAREFSQSTWYQTKEVYKRLNLIWWRDPYYTYGSFVQSALCGLIIGFTFWNLQGSSSDMNQRIFFIFEALMLGILLIF 1190          
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: SNQ2_YEAST (Protein SNQ2 OS=Saccharomyces cerevisiae GN=SNQ2 PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.058e-32
Identity = 78/219 (35.62%), Postives = 127/219 (57.99%), Query Frame = 2
Query:    5 EQRKRLTIAVELVANPSII-FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNISVENQLGIDFAEVYADSSLHQRNKE----LIKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQ 646
            EQRK+L+I VELVA P ++ F+DEPTSGLD++++  +++ +R     G++++CTIHQPS  +FE FD LLLL++GG+ +Y G +G  S  ++ YFE   G  K   + NPA ++LE         +  D+ E + +S   ++ KE    LI +LS     S     P+KY+  +  QFR    +   S+WR+  Y   +  + LV  ++ G  +++ G+
Sbjct:  996 EQRKKLSIGVELVAKPDLLLFLDEPTSGLDSQSSWAIIQLLRKLSKAGQSILCTIHQPSATLFEEFDRLLLLRKGGQTVYFGDIGKNSATILNYFER-NGARKCDSSENPAEYILEAIGAGATASVKEDWHEKWLNSVEFEQTKEKVQDLINDLSKQETKSEVGDKPSKYATSYAYQFRYVLIRTSTSFWRSLNYIMSKMMLMLVGGLYIGFTFFNVGK 1213          
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: PDR15_YEAST (ATP-dependent permease PDR15 OS=Saccharomyces cerevisiae GN=PDR15 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.216e-32
Identity = 84/234 (35.90%), Postives = 130/234 (55.56%), Query Frame = 2
Query:    5 EQRKRLTIAVELVANPSI-IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYFPT-KYSQPFLT----QFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYW--DKGQKTSKQQICRIFL 682
            EQRKRLTI VEL A P + +F+DEPTSGLD++ A    + +R     G+ ++CTIHQPS  + + FD LL L++GG+ +Y G LG     +I+YFE+  G  K     NPA WMLEV   +  +    D+ EV+ +S  ++  +E +  +    PG S    PT +  +PF      QF+    + +  YWR+P Y   +F +T+   +F G  ++  D+  +  + Q+  IF+
Sbjct: 1028 EQRKRLTIGVELAARPKLLVFLDEPTSGLDSQTAWDTCQLMRKLATHGQAILCTIHQPSAILMQQFDRLLFLQKGGQTVYFGDLGEGCKTMIDYFES-KGAHKCPPDANPAEWMLEVVGAAPGSHATQDYNEVWRNSDEYKAVQEELDWMEKNLPGRSK--EPTAEEHKPFAASLYYQFKMVTIRLFQQYWRSPDYLWSKFILTIFNQVFIGFTFFKADRSLQGLQNQMLSIFM 1258          
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: PDR5_YEAST (Pleiotropic ABC efflux transporter of multiple drugs OS=Saccharomyces cerevisiae GN=PDR5 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.518e-31
Identity = 79/232 (34.05%), Postives = 128/232 (55.17%), Query Frame = 2
Query:    5 EQRKRLTIAVELVANPSI-IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNISVENQLGIDFAEVYADSSLHQRNKELI--KELSTPPPGS-SDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTS--KQQICRIFL 682
            EQRKRLTI VEL A P + +F+DEPTSGLD++ A  + + ++   + G+ ++CTIHQPS  + + FD LL ++RGG+ +Y G LG     +I+YFE+  G  K     NPA WMLEV   +  +    D+ EV+ +S  ++  +  +   E   P  GS +      ++SQ  + Q +    + +  YWR+P Y   +F +T+   +F G  ++  G      + Q+  +F+
Sbjct: 1013 EQRKRLTIGVELTAKPKLLVFLDEPTSGLDSQTAWSICQLMKKLANHGQAILCTIHQPSAILMQEFDRLLFMQRGGKTVYFGDLGEGCKTMIDYFES-HGAHKCPADANPAEWMLEVVGAAPGSHANQDYYEVWRNSEEYRAVQSELDWMERELPKKGSITAAEDKHEFSQSIIYQTKLVSIRLFQQYWRSPDYLWSKFILTIFNQLFIGFTFFKAGTSLQGLQNQMLAVFM 1243          
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: ABCGF_DICDI (ABC transporter G family member 15 OS=Dictyostelium discoideum GN=abcG15 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.416e-31
Identity = 76/229 (33.19%), Postives = 128/229 (55.90%), Query Frame = 2
Query:    5 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYF----PTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQICRIF 679
            E+RKR TI VELVA P I+F+DEPTSGLDA+++  +++ +R   D G  +VCTIHQPS  +FE FD +LLL +GG+ +Y G +G +S  L  YF+   GV +  ++ NPA ++LE        +  +D+ + + +S  +Q   + +KEL       + ++     P +Y+     Q    + +    +WR+P Y+   F  + ++ +  G  +++  Q ++     RIF
Sbjct:  989 EERKRTTIGVELVAKPHILFLDEPTSGLDAQSSYNIIKFIRKLADAGMPLVCTIHQPSSVLFEHFDRILLLAKGGKTVYFGDIGEKSKTLTSYFQR-HGVRECSDSENPAEYILEACGAGRHGKSVVDWPQAWKESPEYQSICQELKELQVTGSSYASIHVDNGKPREYATSLTYQTIEVYKRLNLIWWRSPGYSYGTFIQSALVGLINGWTFYNL-QDSANDMNQRIF 1215          

HSP 2 Score: 67.781 bits (164), Expect = 6.629e-11
Identity = 63/227 (27.75%), Postives = 100/227 (44.05%), Query Frame = 2
Query:    8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEY-FEAVP--GVPK-IKEAYNPATWMLEVGNISVENQLGIDFA----EVYADSSLHQRNKELIKELSTP---------PPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYW 634
            +RKR+TIA  +V+  SI   D  T GLDA +A    +++R   DT  +T + + +Q S  I+  FD +L+L++G R +Y GP+G      I+  FE  P    P  +    NP    +  G    E+    + A    E+YA S   QR  E + E+  P            S      + Y+  F  Q  A   + +   W +      R+   LV A  +G +++
Sbjct:  307 ERKRITIAESMVSASSINCYDCSTRGLDAASALDYAKSIRIMSDTLHKTTIASFYQASDSIYNLFDRVLILEKG-RCVYFGPVGLAKQYFIDMGFECEPRKSTPDFLTGVTNPQERKVRPGFTVPESSAEFEEAWKQSEIYAQSCQEQREYEKLIEIEQPSIDFIQEITEQKSKSTSKSSPYTTGFFVQVIALTIRNFQIIWGDKFSLISRYSSVLVQAPIYGSVFF 532          
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: BFR1_SCHPO (Brefeldin A resistance protein OS=Schizosaccharomyces pombe GN=bfr1 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.837e-31
Identity = 73/219 (33.33%), Postives = 120/219 (54.79%), Query Frame = 2
Query:    5 EQRKRLTIAVELVANPSII-FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYFPTK-----YSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKG 643
            EQRKR TI VEL A P+++ F+DEPTSGLD+++A  ++  +R   D G+ ++CTIHQPS  +F+ FD LLLL++GG+ +Y G +G  S  L+ YFE+  G     +  NPA ++L+V           D+ EV+ +S   +     + +++     S D    +K     Y+ P   Q +    + + SYWR P     +  + +   +F G  ++++G
Sbjct: 1026 EQRKRATIGVELAAKPALLLFLDEPTSGLDSQSAWSIVCFLRKLADAGQAILCTIHQPSAVLFDQFDRLLLLQKGGKTVYFGDIGEHSKTLLNYFES-HGAVHCPDDGNPAEYILDVIGAGATATTNRDWHEVWNNSEERKAISAELDKINASFSNSEDKKTLSKEDRSTYAMPLWFQVKMVMTRNFQSYWREPSILMSKLALDIFAGLFIGFTFYNQG 1243          
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: ABCGA_DICDI (ABC transporter G family member 10 OS=Dictyostelium discoideum GN=abcG10 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.285e-30
Identity = 91/249 (36.55%), Postives = 129/249 (51.81%), Query Frame = 2
Query:    5 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLE-VGNISVENQLGIDFAEVYADS-SLHQRNKELIK-ELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWS--------YWRNPQYNAIRFGMTLVIAIFFGLIYW--DKGQKTSKQQICRIF--LELCILFVF 706
            E+RKRLTI +ELVA P I+F+DEPTSGLD++++  +++ +R   D G  +VCTIHQPS  +FE FD +LLL +GG+ +Y G +G +S  L  YFE   GV    E+ NPA ++LE +G  +      ID+ EV+  S  L     EL   E +     SSD      +  P   +F    W Q W         +WR+  Y    F       +  G  +W  D       Q++  IF  L L IL++F
Sbjct:  984 EERKRLTIGIELVAKPHILFLDEPTSGLDSQSSYNIVKFIRKLADAGMPLVCTIHQPSSVLFEYFDRILLLAKGGKTVYYGDIGEKSKTLTSYFER-NGVRSCTESENPAEYILEAIGAGTNPGVSTIDWPEVWKQSPELQDVQAELASLETAATVQISSD---DQDHGPP--REFATSIWYQTWEVYKRLNLIWWRDMSYVYGIFTQAAASGLIIGFTFWNLDLSSSDMNQRVFFIFEILFLGILYIF 1226          
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: PDR10_YEAST (ATP-dependent permease PDR10 OS=Saccharomyces cerevisiae GN=PDR10 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.191e-30
Identity = 79/215 (36.74%), Postives = 116/215 (53.95%), Query Frame = 2
Query:    5 EQRKRLTIAVELVANPSI-IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNISVENQLGIDFAEVYADS-SLHQRNKEL---IKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYW 634
            EQRKRLTI VEL A P + +F+DEPTSGLD++ A    + ++     G+ ++CTIHQPS  + + FD LL L+ GG+ +Y G LG     +I YFEA  G  K     NPA WMLE+   +       D+  ++ DS    +  KEL    +EL     GSS+     +++   L Q +   ++ +  YWR P Y   +F  T+V  +F G  ++
Sbjct: 1067 EQRKRLTIGVELAAKPKLLVFLDEPTSGLDSQTAWSTCQLMKKLASRGQAILCTIHQPSALLMQEFDRLLFLQEGGQTVYFGELGKGCKTMINYFEA-HGAHKCPPDANPAEWMLEIVGAAPGTHASQDYFAIWRDSEEYREMQKELDWMERELPKRTEGSSN-EEQKEFATSTLYQIKLVSYRLFHQYWRTPFYLWSKFFSTIVSELFIGFTFF 1279          
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: ABCG3_DICDI (ABC transporter G family member 3 OS=Dictyostelium discoideum GN=abcG3 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.862e-30
Identity = 82/227 (36.12%), Postives = 127/227 (55.95%), Query Frame = 2
Query:   11 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNISVENQLGIDFAEVYADSSLHQRNK-ELIKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIY--WDKGQKTSKQQICRIFL 682
            RK+++I +EL ++P +IF+DEPTSGLD+ AA  VM  V+   ++GRTVVCTIHQPS +IFE FD+LLLL + G+VIY G  G  S  +I++F +     + +   NPA ++LE+             A  Y  SS+H  N  + ++  +  P G     +  KYS P   Q  +   + + ++ R PQ   +RF  + + AI  G ++   D  Q  ++ +I  +FL
Sbjct:  940 RKKVSIGIELASDPHLIFLDEPTSGLDSSAALKVMNCVKKIAESGRTVVCTIHQPSQEIFEKFDQLLLLDK-GKVIYFGDTGDNSSTVIQHFTSAG--YQYEHGRNPADFILEIAEHPPSTG---QSASDYFKSSIHYSNSIQRLESKTIVPEGVDVPKYKGKYSAPATAQLHSLVKRGWLNHVRRPQTILLRFLRSFIPAIVIGTLFLRLDNDQTGARNRIALVFL 1160          
The following BLAST results are available for this feature:
BLAST of FC920364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
ABCG9_DICDI2.766e-3337.92ABC transporter G family member 9 OS=Dictyostelium... [more]
ABCGE_DICDI1.373e-3236.51ABC transporter G family member 14 OS=Dictyosteliu... [more]
SNQ2_YEAST3.058e-3235.62Protein SNQ2 OS=Saccharomyces cerevisiae GN=SNQ2 P... [more]
PDR15_YEAST5.216e-3235.90ATP-dependent permease PDR15 OS=Saccharomyces cere... [more]
PDR5_YEAST1.518e-3134.05Pleiotropic ABC efflux transporter of multiple dru... [more]
ABCGF_DICDI4.416e-3133.19ABC transporter G family member 15 OS=Dictyosteliu... [more]
BFR1_SCHPO9.837e-3133.33Brefeldin A resistance protein OS=Schizosaccharomy... [more]
ABCGA_DICDI1.285e-3036.55ABC transporter G family member 10 OS=Dictyosteliu... [more]
PDR10_YEAST2.191e-3036.74ATP-dependent permease PDR10 OS=Saccharomyces cere... [more]
ABCG3_DICDI2.862e-3036.12ABC transporter G family member 3 OS=Dictyostelium... [more]

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Properties
Property NameValue
Genbank descriptionC32007D03EF RVDevelop1 Citrus clementina cDNA clone C32007D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920364 ID=FC920364; Name=FC920364; organism=Citrus clementina; type=EST; length=710bp
GACAGAGCAAAGGAAGAGATTGACGATTGCTGTAGAATTGGTTGCTAACC
CTTCTATCATCTTCATGGATGAGCCTACATCTGGGCTTGATGCTAGAGCT
GCTGCTATTGTCATGCGTACTGTTAGAAATACAGTGGATACAGGGAGAAC
AGTTGTGTGTACAATCCACCAGCCAAGCATAGACATTTTTGAAGCATTTG
ACGAGCTATTGTTGTTGAAAAGAGGGGGCCGCGTCATTTATGCTGGACCT
CTTGGTCACGAATCTCACAAGCTCATAGAGTATTTTGAGGCTGTTCCAGG
GGTTCCTAAAATTAAGGAAGCATACAATCCTGCAACATGGATGCTGGAGG
TCGGTAACATTTCAGTTGAGAATCAACTGGGAATTGATTTTGCTGAAGTT
TATGCCGATTCATCGCTTCATCAGAGGAATAAGGAACTTATCAAAGAGCT
TAGTACTCCACCACCTGGCTCGTCAGATCTCTACTTCCCAACCAAATACT
CTCAACCATTTTTAACCCAATTTAGGGCTTGTTTCTGGAAACAGTATTGG
TCTTATTGGAGAAACCCTCAGTACAATGCTATCCGATTTGGCATGACTCT
TGTCATTGCCATTTTCTTTGGTTTAATCTACTGGGACAAAGGACAGAAGA
CTTCCAAACAACAGATCTGCAGAATCTTTTTGGAGCTATGTATTCTATTT
GTATTTTCCT
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