FC920364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: AB14G_ARATH (ABC transporter G family member 14 OS=Arabidopsis thaliana GN=ABCG14 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.352e-16 Identity = 56/224 (25.00%), Postives = 104/224 (46.43%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGN---ISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYW------------RNPQYNAIRFGMTLVIAIFFGLIYW 634 ++KR++I E++ NPS++ +DEPTSGLD+ A ++ T++ GRTVV TIHQPS I+ FD+++LL G + Y + +EYF ++ + NPA +L++ N + + + ++ + K + +L + + +Y++ ++ W W Y R +N +R + +A GL++W Sbjct: 208 EKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAHRIVTTIKRLASGGRTVVTTIHQPSSRIYHMFDKVVLLSEGSPIYYGA-----ASSAVEYFSSLGFSTSL--TVNPADLLLDLANGIPPDTQKETSEQEQKTVKETLVSAYEKNISTKLKAELCNAESHSY--EYTKAAAKNLKSEQWCTTWWYQFTVLLQRGVRERRFESFNKLRIFQVISVAFLGGLLWW 422
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: ABCG7_DICDI (ABC transporter G family member 7 OS=Dictyostelium discoideum GN=abcG7 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.844e-16 Identity = 44/115 (38.26%), Postives = 75/115 (65.22%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN-TVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLE 349 ++KR++I LV NPS++F+DEPTSGLD+ A VM+ + N TV G TV+C+IHQP +I+ F++++++ + GR+IY G + ++ Y ++P + NPA ++L+ Sbjct: 388 EKKRVSIGCALVTNPSLLFLDEPTSGLDSLNALKVMKVLMNLTVIKGVTVICSIHQPRPEIYHLFNKIMIMLK-GRMIYCG------NDVLNYLSSLPNQYQCPNYTNPADFILD 495
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: AB25G_ARATH (ABC transporter G family member 25 OS=Arabidopsis thaliana GN=ABCG25 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16 Identity = 49/118 (41.53%), Postives = 75/118 (63.56%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGN 358 +RKR++IA EL+ NPS++ +DEPTSGLDA AA +++T+ G+TVV +IHQPS +F+ FD +LLL G+ ++ G + + YFE+V P NPA ++L++ N Sbjct: 211 ERKRVSIAHELLINPSLLVLDEPTSGLDATAALRLVQTLAGLAHGKGKTVVTSIHQPSSRVFQMFDTVLLLSE-GKCLFVG----KGRDAMAYFESVGFSPAF--PMNPADFLLDLAN 321
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.525e-15 Identity = 38/80 (47.50%), Postives = 59/80 (73.75%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 247 +++R++IA+E++ P ++F+DEPTSGLD+ +A V +T+R GRTV+ +IHQPS ++FE FD L LL GG+ +Y G Sbjct: 197 EKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALSRDGRTVIASIHQPSSEVFELFDRLYLLS-GGKTVYFG 275
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: ABCG3_MOUSE (ATP-binding cassette sub-family G member 3 OS=Mus musculus GN=Abcg3 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.436e-15 Identity = 62/231 (26.84%), Postives = 103/231 (44.59%), Query Frame = 2 Query: 5 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNISVENQLGID----------------------FAEVYADSSLHQRNKELIKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIY 631 E RKR +IA+ELV I+F+D+PT+GLD R V+ +R GRT++ +I+QP IF+ FD L L+ G+V++ GP + +EYF + + NPA + L+V N N L + A +YA S L+ + ++ +L T PF Q + + + ++ P I+ +T+++A G + Sbjct: 182 ELRKRTSIAMELVTEHPILFLDDPTTGLDLRTTTDVILVLRRMSKKGRTIIFSINQPQYSIFKFFDSLTLV-ASGKVMFHGP----AQDALEYFRSAG--YNYESHNNPADFFLDVINGGFSNILDTEEDGHEDDKYEELFERQYQVTGKLANMYAQSPLYSETRAILDQLLGEQKLERSSAVETTCVTPFCHQLKWIICQSFKNFKGFPWVTVIQAIITVILATAVGTAF 405
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: AB27G_ARATH (ABC transporter G family member 27 OS=Arabidopsis thaliana GN=ABCG27 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.436e-15 Identity = 43/117 (36.75%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGN 358 +RKR+ I E++ NPS++ +DEPTS LD+ A +++ + G+T+V TIHQPS +F FD+L++L RG ++Y G ++ + + YF ++ P + A NPA ++L++ N Sbjct: 295 ERKRVCIGNEIMTNPSLLLLDEPTSSLDSTTALKIVQMLHCIAKAGKTIVTTIHQPSSRLFHRFDKLVVLSRGS-LLYFG----KASEAMSYFSSIGCSPLL--AMNPAEFLLDLVN 404
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: WBC30_ARATH (Putative white-brown complex homolog protein 30 OS=Arabidopsis thaliana GN=WBC30 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15 Identity = 41/129 (31.78%), Postives = 76/129 (58.91%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEV--------GNISVE 370 QRKR+ + VE+V PS++ +DEPT+GLD+ ++ +++R +R G + +HQPS +++ FD++++L +GG +Y H S K IE + A G+ + + NP +++ G+I++E Sbjct: 610 QRKRVNVGVEMVMEPSLLILDEPTTGLDSASSQLLLRALRREALEGVNICMVVHQPSYTMYKMFDDMIILAKGGLTVY-----HGSVKKIEEYFADIGI-TVPDRVNPPDHYIDILEGIVKPDGDITIE 732
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: YO075_YEAST (Uncharacterized ABC transporter ATP-binding protein/permease YOL075C OS=Saccharomyces cerevisiae GN=YOL075C/YOL074C PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 40/119 (33.61%), Postives = 77/119 (64.71%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNI 361 +++RL+I ++++NPSI+F+DEPT+GLDA +A +V++T++ + GRT + +IHQP DI D++ +L + G V+Y + + I YFE++ + + NPA + +++ ++ Sbjct: 190 EKRRLSIGTQMISNPSIMFLDEPTTGLDAYSAFLVIKTLKKLAKEDGRTFIMSIHQPRSDILFLLDQVCILSK-GNVVYCDKMDN----TIPYFESIG--YHVPQLVNPADYFIDLSSV 301 HSP 2 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 49/173 (28.32%), Postives = 90/173 (52.02%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYF-EAVPGVPKIKEAYNPATWMLEVGNISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGS-----SDLYFPTKYSQ 505 +++R+T+ V+L+ +P I+ +DEPTSGLD+ +A ++ + + G+T++ TIHQP ++F+ F +LLL + GR + G ++I YF E P N A + L++ +++ +N+ + + L + E +P P S S F T+YS+ Sbjct: 843 EKRRVTMGVQLLNDPPILLLDEPTSGLDSFTSATILEILEKLCREQGKTIIITIHQPRSELFKRFGNVLLLAKSGRTAFNG----SPDEMIAYFTELGYNCPSFT---NVADFFLDLISVNTQNEQNEISSRARVEKILSAWKANMDNESLSPTPISEKQQYSQESFFTEYSE 1008
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: AB6G_ARATH (ABC transporter G family member 6 OS=Arabidopsis thaliana GN=ABCG6 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.755e-14 Identity = 60/232 (25.86%), Postives = 101/232 (43.53%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNISVENQLGIDFAEVYADSSLHQRNKE-------LIKEL----------------STPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYW 634 +R+R++I ++++ +P ++F+DEPTSGLD+ +A V++ ++ +G V+ T+HQPS + D LL L RG V P ++ F A G P I E N + L++ +E G + V + QR E +KE +T GSS + ++ PF + + + R P+ IR G LV ++W Sbjct: 237 ERRRVSIGIDIIHDPILLFLDEPTSGLDSTSALSVIKVLKRIAQSGSMVIMTLHQPSYRLLRLLDRLLFLSRGQTVFSGSPA------MLPRFFAEFGHP-IPEHENRTEFALDLIR-ELEGSAGGTRSLVEFNKGFRQRKAEPRSQTGLSLKEAISASISKGKLVSGATTTTHSSGSSPVSTIPTFANPFWVELAVLAKRSMTNSRRQPELFGIRLGAVLVTGFILATMFW 460
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: AB20G_ARATH (ABC transporter G family member 20 OS=Arabidopsis thaliana GN=ABCG20 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 60/226 (26.55%), Postives = 107/226 (47.35%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNISVENQLG----IDF-----AEVYADSSLHQRNKELIKELSTP------PPGSSDL--YFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYW 634 +R+R++I +++ +P I+F+DEPTSGLD+ +A +V++ ++ +G V+ +IHQPS I D+L+ L R G +Y+G H E+ +P E N + L++ ++ G ++F A+ + S N L +S G+++L F T ++ PF T+ + + R P+ IR G LV + I+W Sbjct: 255 ERRRVSIGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDKLIFLSR-GNTVYSGSPTHLPQFFSEFGHPIP------ENENKPEFALDLIRELEDSPEGTKSLVEFHKQWRAKQTSSQSRRNTNVSLKDAISASISRGKLVSGATNLRSSFQT-FANPFWTEMLVIGKRSILNSRRQPELFGIRLGAVLVTGMILATIFW 472 The following BLAST results are available for this feature:
BLAST of FC920364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920364 ID=FC920364; Name=FC920364; organism=Citrus clementina; type=EST; length=710bpback to top |